The MYST histone acetyltransferases are essential for gametophyte development in arabidopsis

BMC Plant Biology

Volumn 8, Issue , 2008, Pages

  Latrasse, David ^a   Benhamed, Moussa ^a   Henry, Yves ^a   Domenichini, Séverine ^a   Kim, Wanhui ^a   Zhou, Dao Xiu ^a   Delarue, Marianne ^a  

^a INSTITUTE OF PLANT SCIENCES PARIS SACLAY IPS2   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; MAMMALIA;

BACTERIAL DNA; BETA GLUCURONIDASE; HISTONE ACETYLTRANSFERASE; MESSENGER RNA; T DNA; T-DNA;

ARABIDOPSIS; ARTICLE; CHEMISTRY; CYTOLOGY; ENZYMOLOGY; GENE EXPRESSION REGULATION; GENETICS; GERM CELL; METABOLISM; MUTATION; PHENOTYPE; PHYLOGENY; PLANT GENE; PRENATAL DEVELOPMENT; PROTEIN TERTIARY STRUCTURE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

ARABIDOPSIS; DNA, BACTERIAL; GENE EXPRESSION REGULATION, PLANT; GENES, PLANT; GERM CELLS; GLUCURONIDASE; HISTONE ACETYLTRANSFERASES; MUTAGENESIS, INSERTIONAL; MUTATION; PHENOTYPE; PHYLOGENY; PROTEIN STRUCTURE, TERTIARY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA, MESSENGER;

EID: 57849113242     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-8-121     Document Type: Article

References (54)

1. Chromatin modifications by methylation and ubiquitination: implications in the regulation of gene expression. A Shilatifard, Annu Rev Biochem 2006 75 243 269 10.1146/annurev.biochem.75.103004.142422 16756492
2. Chromatin modifications and their function. T Kouzarides, Cell 2007 128 4 693 705 10.1016/j.cell.2007.02.005 17320507
3. The complex language of chromatin regulation during transcription. SL Berger, Nature 2007 447 7143 407 412 10.1038/nature05915 17522673
4. Functions of site-specific histone acetylation and deacetylation. MD Shahbazian M Grunstein, Annu Rev Biochem 2007 76 75 100 10.1146/annurev.biochem. 76.052705.162114 17362198
5. Acetylation of histones and transcription-related factors. DE Sterner SL Berger, Microbiol Mol Biol Rev 2000 64 2 435 459 10839822 10.1128/MMBR.64.2.435- 459.2000
6. Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. R Pandey A Muller CA Napoli DA Selinger CS Pikaard EJ Richards J Bender DW Mount RA Jorgensen, Nucleic Acids Res 2002 30 23 5036 5055 12466527 10.1093/nar/gkf660
7. Transcriptional adaptor and histone acetyltransferase proteins in Arabidopsis and their interactions with CBF1, a transcriptional activator involved in cold-regulated gene expression. EJ Stockinger Y Mao MK Regier SJ Triezenberg MF Thomashow, Nucleic Acids Res 2001 29 7 1524 1533 11266554 10.1093/nar/29.7.1524
8. Disruption mutations of ADA2b and GCN5 transcriptional adaptor genes dramatically affect Arabidopsis growth, development, and gene expression. KE Vlachonasios MF Thomashow SJ Triezenberg, Plant Cell 2003 15 3 626 638 12615937 10.1105/tpc.007922
9. Arabidopsis histone acetyltransferase AtGCN5 regulates the floral meristem activity through the WUSCHEL/AGAMOUS pathway. C Bertrand C Bergounioux S Domenichini M Delarue DX Zhou, J Biol Chem 2003 278 30 28246 28251 10.1074/jbc.M302787200 12740375
10. Arabidopsis GCN5, HD1, and TAF1/HAF2 interact to regulate histone acetylation required for light-responsive gene expression. M Benhamed C Bertrand C Servet DX Zhou, Plant Cell 2006 18 11 2893 2903 17085686 10.1105/tpc.106. 043489
11. TOPLESS regulates apical embryonic fate in Arabidopsis. JA Long C Ohno ZR Smith EM Meyerowitz, Science 2006 312 5779 1520 1523 10.1126/science.1123841 16763149
12. Arabidopsis HAF2 gene encoding TATA-binding protein (TBP)-associated factor TAF1, is required to integrate light signals to regulate gene expression and growth. C Bertrand M Benhamed YF Li M Ayadi G Lemonnier JP Renou M Delarue DX Zhou, J Biol Chem 2005 280 2 1465 1473 10.1074/jbc.M409000200 15525647
13. Role of plant CBP/p300-like genes in the regulation of flowering time. SK Han JD Song YS Noh B Noh, Plant J 2007 49 1 103 14 10.1111/j.1365-313X.2006. 02939.x 17144897
14. The MYST family of histone acetyltransferases and their intimate links to cancer. N Avvakumov J Cote, Oncogene 2007 26 37 5395 5407 10.1038/sj.onc. 1210608 17694081
15. The diverse biological roles of MYST histone acetyltransferase family proteins. T Thomas AK Voss, Cell Cycle 2007 6 6 696 704 17374998
16. MYSTs mark chromatin for chromosomal functions. L Pillus, Curr Opin Cell Biol 2008 20 3 326 333 10.1016/j.ceb.2008.04.009 18511253
17. Histone acetyltransferase HBO1 interacts with the ORC1 subunit of the human initiator protein. M Iizuka B Stillman, J Biol Chem 1999 274 33 23027 23034 10.1074/jbc.274.33.23027 10438470
18. Replication factors MCM2 and ORC1 interact with the histone acetyltransferase HBO1. TW Burke JG Cook M Asano JR Nevins, J Biol Chem 2001 276 18 15397 15408 10.1074/jbc.M011556200 11278932
19. Chromatin regulates origin activity in Drosophila follicle cells. BD Aggarwal BR Calvi, Nature 2004 430 6997 372 376 10.1038/nature02694 15254542
20. ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation. Y Doyon C Cayrou M Ullah AJ Landry V Cote W Selleck WS Lane S Tan XJ Yang J Cote, Mol Cell 2006 21 1 51 64 10.1016/j.molcel.2005.12.007 16387653
21. Regulation of replication licensing by acetyltransferase Hbo1. M Iizuka T Matsui H Takisawa MM Smith, Mol Cell Biol 2006 26 3 1098 1108 16428461 10.1128/MCB.26.3.1098-1108.2006
22. Structural and functional conservation of the NuA4 histone acetyltransferase complex from yeast to humans. Y Doyon W Selleck WS Lane S Tan J Cote, Mol Cell Biol 2004 24 5 1884 1896 14966270 10.1128/MCB.24.5.1884-1896. 2004
23. Esa1p is an essential histone acetyltransferase required for cell cycle progression. AS Clarke JE Lowell SJ Jacobson L Pillus, Mol Cell Biol 1999 19 4 2515 2526 10082517
24. Investigation of MYST4 histone acetyltransferase and its involvement in mammalian gametogenesis. S McGraw G Morin C Vigneault P Leclerc MA Sirard, BMC Dev Biol 2007 7 123 17980037 10.1186/1471-213X-7-123
25. The transcriptional coactivator Querkopf controls adult neurogenesis. TD Merson MP Dixon C Collin RL Rietze PF Bartlett T Thomas AK Voss, J Neurosci 2006 26 44 11359 11370 10.1523/JNEUROSCI.2247-06.2006 17079664
26. Mof (MYST1, KAT8) is essential for progression of embryonic development past the blastocyst stage and required for normal chromatin architecture. T Thomas MP Dixon AJ Kueh AK Voss, Mol Cell Biol 2008 28 16 5093 5105 18541669 10.1128/MCB.02202-07
27. The mammalian ortholog of Drosophila MOF that acetylates histone H4 lysine 16 is essential for embryogenesis and oncogenesis. A Gupta TG Guerin-Peyrou GG Sharma C Park M Agarwal RK Ganju S Pandita K Choi S Sukumar RK Pandita, Mol Cell Biol 2008 28 1 397 409 17967868 10.1128/MCB.01045-07
28. In vitro specificities of Arabidopsis co-activator histone acetyltransferases: implications for histone hyperacetylation in gene activation. KW Earley MS Shook B Brower-Toland L Hicks CS Pikaard, Plant J 2007 52 4 615 626 10.1111/j.1365-313X.2007.03264.x 17877703
29. Histone acetyltransferases. SY Roth JM Denu CD Allis, Annu Rev Biochem 2001 70 81 120 10.1146/annurev.biochem.70.1.81 11395403
30. Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. JE Bowers BA Chapman J Rong AH Paterson, Nature 2003 422 6930 433 438 10.1038/nature01521 12660784
31. Genome duplication and the origin of Angiosperms. S De Bodt S Maere Y Van de Peer, Trends Ecol Evol 2005 20 11 591 597 10.1016/j.tree.2005.07.008 16701441
32. Male Gametophyte Development. S McCormick, Plant Cell 1993 5 10 1265 1275 12271026 10.1105/tpc.5.10.1265
33. Control of male gametophyte development. S McCormick, Plant Cell 2004 16 15037731
34. Identification of gametophytic mutations affecting female gametophyte development in Arabidopsis. CA Christensen S Subramanian GN Drews, Dev Biol 1998 202 1 136 151 10.1006/dbio.1998.8980 9758709
35. Tracing the origin of the compensasome: evolutionary history of DEAH helicase and MYST acetyltransferase gene families. R Sanjuan I Marin, Mol Biol Evol 2001 18 3 330 343 11230534
36. Condensin and cohesin knockouts in Arabidopsis exhibit a titan seed phenotype. CM Liu J McElver I Tzafrir R Joosen P Wittich D Patton AA van Lammeren D Meinke, Plant J 2002 29 4 405 415 10.1046/j.1365-313x.2002.01224.x 11846874
37. The Arabidopsis cohesin protein SYN3 localizes to the nucleolus and is essential for gametogenesis. L Jiang M Xia LI Strittmatter CA Makaroff, Plant J 2007 50 6 1020 1034 10.1111/j.1365-313X.2007.03106.x 17488242
38. Arabidopsis separase AESP is essential for embryo development and the release of cohesin during meiosis. Z Liu CA Makaroff, Plant Cell 2006 18 5 1213 1225 16582011 10.1105/tpc.105.036913
39. Cell growth and differentiation in Arabidopsis epidermal cells. S Guimil C Dunand, J Exp Bot 2007 58 14 3829 3840 10.1093/jxb/erm253 18162628
40. Acetylation by Tip60 is required for selective histone variant exchange at DNA lesions. T Kusch L Florens WH Macdonald SK Swanson RL Glaser JR Yates 3rd SM Abmayr MP Washburn JL Workman, Science 2004 306 5704 2084 2087 10.1126/science.1103455 15528408
41. Targeted Degradation of the Cyclin-Dependent Kinase Inhibitor ICK4/KRP6 by RING-Type E3 Ligases Is Essential for Mitotic Cell Cycle Progression during Arabidopsis Gametogenesis. J Liu Y Zhang G Qin T Tsuge N Sakaguchi G Luo K Sun D Shi S Aki N Zheng, Plant Cell 2008
42. Multiple links between the NuA4 histone acetyltransferase complex and epigenetic control of transcription. L Galarneau A Nourani AA Boudreault Y Zhang L Heliot S Allard J Savard WS Lane DJ Stillman J Cote, Mol Cell 2000 5 6 927 937 10.1016/S1097-2765(00)80258-0 10911987
43. Deposition of histone onto the replicating chromosome: newly synthesized histone is not found near the replication fork. V Jackson D Granner R Chalkley, Proc Natl Acad Sci USA 1976 73 7 2266 2269 1065875 10.1073/pnas.73.7.2266
44. Histone H4 acetylation of euchromatin and heterochromatin is cell cycle dependent and correlated with replication rather than with transcription. Z Jasencakova A Meister J Walter BM Turner I Schubert, Plant Cell 2000 12 11 2087 2100 11090211 10.1105/tpc.12.11.2087
45. An Arabidopsis thaliana T-DNA mutagenized population (GABI-Kat) for flanking sequence tag-based reverse genetics. MG Rosso Y Li N Strizhov B Reiss K Dekker B Weisshaar, Plant Mol Biol 2003 53 2 247 249 10.1023/B:PLAN.0000009297. 37235.4a 14756321
46. Differential staining of aborted and nonaborted pollen. MP Alexander, Stain Technol 1969 44 3 117 122 4181665
47. Meiotic cytology and chromosome behaviour in wild-type Arabidopsis thaliana. SJ Armstrong GH Jones, J Exp Bot 2003 54 380 1 10 10.1093/jxb/54.380.1 12456750
48. The CLUSTAL-X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins, Nucleic Acids Res 1997 25 24 4876 4882 9396791 10.1093/nar/25.24.4876
49. A comprehensive comparison of multiple sequence alignment programs. JD Thompson F Plewniak O Poch, Nucleic Acids Res 1999 27 13 2682 2690 10373585 10.1093/nar/27.13.2682
50. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. S Guindon O Gascuel, Systematic Biology 2003 52 5 696 704 10.1080/10635150390235520 14530136
51. Pfam: clans, web tools and services. RD Finn J Mistry B Schuster-Bockler S Griffiths-Jones V Hollich T Lassmann S Moxon M Marshall A Khanna R Durbin, Nucleic Acids Res 2006 34 Database D247 251 16381856 10.1093/nar/gkj149
52. The PROSITE database. N Hulo A Bairoch V Bulliard L Cerutti E De Castro PS Langendijk-Genevaux M Pagni CJ Sigrist, Nucleic Acids Res 2006 34 Database D227 230 16381852 10.1093/nar/gkj063
53. SMART, a simple modular architecture research tool: identification of signaling domains. J Schultz F Milpetz P Bork CP Ponting, Proc Natl Acad Sci USA 1998 95 11 5857 5864 9600884 10.1073/pnas.95.11.5857
54. PAL2NAL: robust conversion of protein sequence alignements into the corresponding codon alignement. M Suyama D Torrents P Bork, Nucleic Acid Res 2006 34 W609 W612 16845082 10.1093/nar/gkl315