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Volumn 13, Issue SUPPL.7, 2012, Pages

ProDis-ContSHC: Learning protein dissimilarity measures and hierarchical context coherently for protein-protein comparison in protein database retrieval

Author keywords

[No Author keywords available]

Indexed keywords

BIOMEDICAL APPLICATIONS; CLASS LABEL INFORMATIONS; CONTEXTUAL INFORMATION; DISSIMILARITY MEASURES; DISSIMILARITY VECTORS; MACHINE LEARNING COMMUNITIES; RETRIEVAL PERFORMANCE; SIMILARITY MEASURE;

EID: 84872784072     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-13-S7-S2     Document Type: Article
Times cited : (43)

References (70)
  • 1
    • 77958612204 scopus 로고    scopus 로고
    • Incorporating significant amino acid pairs to identify O-linked glycosylation sites on transmembrane proteins and non-transmembrane proteins
    • 10.1186/1471-2105-11-536, 2989983, 21034461
    • Chen SA, Lee TY, Ou YY. Incorporating significant amino acid pairs to identify O-linked glycosylation sites on transmembrane proteins and non-transmembrane proteins. BMC Bioinformatics 2010, 11:536. 10.1186/1471-2105-11-536, 2989983, 21034461.
    • (2010) BMC Bioinformatics , vol.11 , pp. 536
    • Chen, S.A.1    Lee, T.Y.2    Ou, Y.Y.3
  • 2
    • 77953252823 scopus 로고    scopus 로고
    • Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates
    • 10.1186/1471-2105-11-313, 3098073, 20537135
    • Sobolev B, Filimonov D, Lagunin A, Zakharov A, Koborova O, Kel A, Poroikov V. Functional classification of proteins based on projection of amino acid sequences: application for prediction of protein kinase substrates. BMC Bioinformatics 2010, 11:313. 10.1186/1471-2105-11-313, 3098073, 20537135.
    • (2010) BMC Bioinformatics , vol.11 , pp. 313
    • Sobolev, B.1    Filimonov, D.2    Lagunin, A.3    Zakharov, A.4    Koborova, O.5    Kel, A.6    Poroikov, V.7
  • 3
    • 77955613051 scopus 로고    scopus 로고
    • Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
    • 10.1186/1471-2105-11-428, 2936399, 20718947
    • Albayrak A, Otu HH, Sezerman UO. Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets. BMC Bioinformatics 2010, 11:428. 10.1186/1471-2105-11-428, 2936399, 20718947.
    • (2010) BMC Bioinformatics , vol.11 , pp. 428
    • Albayrak, A.1    Otu, H.H.2    Sezerman, U.O.3
  • 5
    • 70449713348 scopus 로고    scopus 로고
    • Automated flexion crease identification using internal image seams
    • Cook T, Sutton R, Buckley K. Automated flexion crease identification using internal image seams. Pattern Recognition 2010, 43(3):630-635.
    • (2010) Pattern Recognition , vol.43 , Issue.3 , pp. 630-635
    • Cook, T.1    Sutton, R.2    Buckley, K.3
  • 6
    • 34547573955 scopus 로고    scopus 로고
    • Protein-protein interaction hotspots carved into sequences
    • 10.1371/journal.pcbi.0030119, 1914369, 17630824
    • Ofran Y, Rost B. Protein-protein interaction hotspots carved into sequences. PLoS Comput Biol 2007, 3(7):e119. 10.1371/journal.pcbi.0030119, 1914369, 17630824.
    • (2007) PLoS Comput Biol , vol.3 , Issue.7
    • Ofran, Y.1    Rost, B.2
  • 7
    • 77958498250 scopus 로고    scopus 로고
    • Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data
    • 10.1093/bioinformatics/btq510, 3025743, 20817744
    • Yhou ZH, Lei YK, Gui J, Huang DS, Zhou X. Using manifold embedding for assessing and predicting protein interactions from high-throughput experimental data. Bioinformatics 2010, 26(21):2744-2751. 10.1093/bioinformatics/btq510, 3025743, 20817744.
    • (2010) Bioinformatics , vol.26 , Issue.21 , pp. 2744-2751
    • Yhou, Z.H.1    Lei, Y.K.2    Gui, J.3    Huang, D.S.4    Zhou, X.5
  • 8
    • 77950651626 scopus 로고    scopus 로고
    • APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility
    • 10.1186/1471-2105-11-174, 2874803, 20377884
    • Xia JF, Zhao XM, Song J, Huang DS. APIS: accurate prediction of hot spots in protein interfaces by combining protrusion index with solvent accessibility. BMC Bioinformatics 2010, 11:174. 10.1186/1471-2105-11-174, 2874803, 20377884.
    • (2010) BMC Bioinformatics , vol.11 , pp. 174
    • Xia, J.F.1    Zhao, X.M.2    Song, J.3    Huang, D.S.4
  • 9
    • 77955106017 scopus 로고    scopus 로고
    • A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties of functional gene network
    • 10.1186/1471-2105-11-343, 2909217, 20573270
    • Yhou ZH, Yin Z, Han K, Huang DS, Zhou X. A semi-supervised learning approach to predict synthetic genetic interactions by combining functional and topological properties of functional gene network. BMC Bioinformatics 2010, 11:343. 10.1186/1471-2105-11-343, 2909217, 20573270.
    • (2010) BMC Bioinformatics , vol.11 , pp. 343
    • Yhou, Z.H.1    Yin, Z.2    Han, K.3    Huang, D.S.4    Zhou, X.5
  • 10
    • 78449281410 scopus 로고    scopus 로고
    • Predicting protein-protein interactions from protein sequences using meta predictor
    • 10.1007/s00726-010-0588-1, 20386937
    • Xia JF, Zhao XM, Huang DS. Predicting protein-protein interactions from protein sequences using meta predictor. Amino Acids 2010, 39(5):1595-1599. 10.1007/s00726-010-0588-1, 20386937.
    • (2010) Amino Acids , vol.39 , Issue.5 , pp. 1595-1599
    • Xia, J.F.1    Zhao, X.M.2    Huang, D.S.3
  • 11
    • 77951667947 scopus 로고    scopus 로고
    • Predicting protein-protein interactions from sequence using correlation coefficient and high-quality interaction dataset
    • 10.1007/s00726-009-0295-y, 19387790
    • Shi MG, Xia JF, Li XL, Huang DS. Predicting protein-protein interactions from sequence using correlation coefficient and high-quality interaction dataset. Amino Acids 2010, 38(3):891-899. 10.1007/s00726-009-0295-y, 19387790.
    • (2010) Amino Acids , vol.38 , Issue.3 , pp. 891-899
    • Shi, M.G.1    Xia, J.F.2    Li, X.L.3    Huang, D.S.4
  • 12
  • 13
    • 33646509222 scopus 로고    scopus 로고
    • Identifying protein-protein interfacial residues in heterocomplexes using residue conservation scores
    • 10.1016/j.ijbiomac.2006.02.024, 16600360
    • Li JJ, Huang DS, Wang B, Chen P. Identifying protein-protein interfacial residues in heterocomplexes using residue conservation scores. Int J Biol Macromol 2006, 38:241-247. 10.1016/j.ijbiomac.2006.02.024, 16600360.
    • (2006) Int J Biol Macromol , vol.38 , pp. 241-247
    • Li, J.J.1    Huang, D.S.2    Wang, B.3    Chen, P.4
  • 14
    • 30644470508 scopus 로고    scopus 로고
    • Predicting protein interaction sites from residue spatial sequence profile and evolution rate
    • 10.1016/j.febslet.2005.11.081, 16376878
    • Wang B, Chen P, Huang DS, Li JJ, Lok TM, Lyu MR. Predicting protein interaction sites from residue spatial sequence profile and evolution rate. FEBS Lett 2006, 580(2):380-384. 10.1016/j.febslet.2005.11.081, 16376878.
    • (2006) FEBS Lett , vol.580 , Issue.2 , pp. 380-384
    • Wang, B.1    Chen, P.2    Huang, D.S.3    Li, J.J.4    Lok, T.M.5    Lyu, M.R.6
  • 17
    • 37549030867 scopus 로고    scopus 로고
    • On the use of structure and sequence-based features for protein classification and retrieval
    • Marsolo K, Parthasarathy S. On the use of structure and sequence-based features for protein classification and retrieval. Knowledge and Information Systems 2008, 14:59-80.
    • (2008) Knowledge and Information Systems , vol.14 , pp. 59-80
    • Marsolo, K.1    Parthasarathy, S.2
  • 18
    • 2442645157 scopus 로고    scopus 로고
    • Rapid 3D protein structure database searching using information retrieval techniques
    • 10.1093/bioinformatics/bth036, 14962928
    • Aung Z, Tan K. Rapid 3D protein structure database searching using information retrieval techniques. Bioinformatics 2004, 20(7):1045-1052. 10.1093/bioinformatics/bth036, 14962928.
    • (2004) Bioinformatics , vol.20 , Issue.7 , pp. 1045-1052
    • Aung, Z.1    Tan, K.2
  • 19
    • 78049527035 scopus 로고    scopus 로고
    • A comparative study of TF*IDF, LSI and multi-words for text classification
    • Zhang W, Yoshida T, Tang X. A comparative study of TF*IDF, LSI and multi-words for text classification. Expert Syst Appl 2011, 38(3):2758-2765.
    • (2011) Expert Syst Appl , vol.38 , Issue.3 , pp. 2758-2765
    • Zhang, W.1    Yoshida, T.2    Tang, X.3
  • 21
  • 22
    • 60849097564 scopus 로고    scopus 로고
    • Comparison of methods for estimating the nucleotide substitution matrix
    • 10.1186/1471-2105-9-511, 2655096, 19046431
    • Oscamou M, McDonald D, Yap VB, Huttley GA, Lladser ME, Knight R. Comparison of methods for estimating the nucleotide substitution matrix. BMC Bioinformatics 2008, 9:511. 10.1186/1471-2105-9-511, 2655096, 19046431.
    • (2008) BMC Bioinformatics , vol.9 , pp. 511
    • Oscamou, M.1    McDonald, D.2    Yap, V.B.3    Huttley, G.A.4    Lladser, M.E.5    Knight, R.6
  • 24
    • 51349090017 scopus 로고    scopus 로고
    • Fast protein tertiary structure retrieval based on global surface shape similarity
    • 10.1002/prot.22030, 18361455
    • Sael L, Li B, La D, Fang Y, Ramani K, Rustamov R, Kihara D. Fast protein tertiary structure retrieval based on global surface shape similarity. Proteins 2008, 72:1259-1273. 10.1002/prot.22030, 18361455.
    • (2008) Proteins , vol.72 , pp. 1259-1273
    • Sael, L.1    Li, B.2    La, D.3    Fang, Y.4    Ramani, K.5    Rustamov, R.6    Kihara, D.7
  • 25
    • 79251483526 scopus 로고    scopus 로고
    • Estimating bounds for quadratic assignment problems associated with Hamming and Manhattan distance matrices based on semidefinite programming
    • Mittelmann H, Peng J. Estimating bounds for quadratic assignment problems associated with Hamming and Manhattan distance matrices based on semidefinite programming. SIAM J Optim 2010, 20(6):3408-3426.
    • (2010) SIAM J Optim , vol.20 , Issue.6 , pp. 3408-3426
    • Mittelmann, H.1    Peng, J.2
  • 26
    • 75149131051 scopus 로고    scopus 로고
    • A fast indexing approach for protein structure comparison
    • 10.1186/1471-2105-11-S1-S46, 20122220
    • Zhang L, Bailey J, Konagurthu AS, Ramamohanarao K. A fast indexing approach for protein structure comparison. BMC Bioinformatics 2010, 11(Suppl 1):S46. 10.1186/1471-2105-11-S1-S46, 20122220.
    • (2010) BMC Bioinformatics , vol.11 , Issue.SUPPL. 1
    • Zhang, L.1    Bailey, J.2    Konagurthu, A.S.3    Ramamohanarao, K.4
  • 27
    • 71549131309 scopus 로고    scopus 로고
    • Protein comparison at the domain architecture level
    • 10.1186/1471-2105-10-S15-S5, 2788356, 19958515
    • Lee B, Lee D. Protein comparison at the domain architecture level. BMC Bioinformatics 2009, 10(Suppl 15):S5. 10.1186/1471-2105-10-S15-S5, 2788356, 19958515.
    • (2009) BMC Bioinformatics , vol.10 , Issue.SUPPL. 15
    • Lee, B.1    Lee, D.2
  • 29
    • 0034860531 scopus 로고    scopus 로고
    • Statistical analysis of the Tanimoto coefficient self-organizing map (TCSOM) applied to health behavioral survey data
    • Garavaglia S. Statistical analysis of the Tanimoto coefficient self-organizing map (TCSOM) applied to health behavioral survey data. International Joint Conference on Neural Networks, 2001. IJCNN '01. 2001, 2483-2488.
    • (2001) International Joint Conference on Neural Networks, 2001. IJCNN '01. , pp. 2483-2488
    • Garavaglia, S.1
  • 35
    • 0000142394 scopus 로고
    • A relationship between arbitrary positive matrices and doubly stochastic matrices
    • Sinkhorn R. A relationship between arbitrary positive matrices and doubly stochastic matrices. Ann Math Statist 1964, 35(2):876-879.
    • (1964) Ann Math Statist , vol.35 , Issue.2 , pp. 876-879
    • Sinkhorn, R.1
  • 36
    • 79958809114 scopus 로고    scopus 로고
    • Learning context-sensitive similarity by shortest path propagation
    • Wang J, Li Y, Bai X, Zhang Y, Wang C, Tang N. Learning context-sensitive similarity by shortest path propagation. Pattern Recognition 2011, 44(10-11):2367-2374.
    • (2011) Pattern Recognition , vol.44 , Issue.10-11 , pp. 2367-2374
    • Wang, J.1    Li, Y.2    Bai, X.3    Zhang, Y.4    Wang, C.5    Tang, N.6
  • 37
    • 27144465224 scopus 로고    scopus 로고
    • Motif-based protein ranking by network propagation
    • 10.1093/bioinformatics/bti608, 16076885
    • Kuang R, Weston J, Noble W, Leslie C. Motif-based protein ranking by network propagation. Bioinformatics 2005, 21(19):3711-3718. 10.1093/bioinformatics/bti608, 16076885.
    • (2005) Bioinformatics , vol.21 , Issue.19 , pp. 3711-3718
    • Kuang, R.1    Weston, J.2    Noble, W.3    Leslie, C.4
  • 38
    • 33947319163 scopus 로고    scopus 로고
    • Protein ranking by semi-supervised network propagation
    • 10.1186/1471-2105-7-S1-S10, 1764466, 17254294
    • Weston J, Kuang R, Leslie C, Noble WS. Protein ranking by semi-supervised network propagation. BMC Bioinformatics 2006, 7(Suppl 1):S10. 10.1186/1471-2105-7-S1-S10, 1764466, 17254294.
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 1
    • Weston, J.1    Kuang, R.2    Leslie, C.3    Noble, W.S.4
  • 41
    • 78650816392 scopus 로고    scopus 로고
    • MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features
    • 10.1186/1471-2105-11-S11-S11, 3040525, 21210978
    • Ding J, Zhou S, Guan J. MiRenSVM: towards better prediction of microRNA precursors using an ensemble SVM classifier with multi-loop features. BMC Bioinformatics 2010, 11(Suppl 11):S11. 10.1186/1471-2105-11-S11-S11, 3040525, 21210978.
    • (2010) BMC Bioinformatics , vol.11 , Issue.SUPPL. 11
    • Ding, J.1    Zhou, S.2    Guan, J.3
  • 42
    • 77958554380 scopus 로고    scopus 로고
    • Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
    • 10.1186/1471-2105-11-537, 2819990, 20055997
    • González AJ, Liao L. Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines. BMC Bioinformatics 2010, 11:537. 10.1186/1471-2105-11-537, 2819990, 20055997.
    • (2010) BMC Bioinformatics , vol.11 , pp. 537
    • González, A.J.1    Liao, L.2
  • 46
    • 75649113326 scopus 로고    scopus 로고
    • LipocalinPred: a SVM-based method for prediction of lipocalins
    • 10.1186/1471-2105-10-445, 2813246, 20030857
    • Ramana J, Gupta D. LipocalinPred: a SVM-based method for prediction of lipocalins. BMC Bioinformatics 2009, 10:445. 10.1186/1471-2105-10-445, 2813246, 20030857.
    • (2009) BMC Bioinformatics , vol.10 , pp. 445
    • Ramana, J.1    Gupta, D.2
  • 48
    • 0033977581 scopus 로고    scopus 로고
    • The ASTRAL compendium for protein structure and sequence analysis
    • 10.1093/nar/28.1.254, 102434, 10592239
    • Brenner S, Koehl P, Levitt R. The ASTRAL compendium for protein structure and sequence analysis. Nucleic Acids Res 2000, 28(1):254-256. 10.1093/nar/28.1.254, 102434, 10592239.
    • (2000) Nucleic Acids Res , vol.28 , Issue.1 , pp. 254-256
    • Brenner, S.1    Koehl, P.2    Levitt, R.3
  • 49
    • 67650079766 scopus 로고    scopus 로고
    • Tableau-based protein substructure search using quadratic programming
    • 10.1186/1471-2105-10-153, 2705363, 19450287
    • Stivala A, Wirth A, Stuckey PJ. Tableau-based protein substructure search using quadratic programming. BMC Bioinformatics 2009, 10:153. 10.1186/1471-2105-10-153, 2705363, 19450287.
    • (2009) BMC Bioinformatics , vol.10 , pp. 153
    • Stivala, A.1    Wirth, A.2    Stuckey, P.J.3
  • 50
    • 84880008790 scopus 로고    scopus 로고
    • FSSP/DALI Database
    • FSSP/DALI Database. , http://ekhidna.biocenter.helsinki.fi/dali/start
  • 51
    • 0029918694 scopus 로고    scopus 로고
    • The FSSP database: fold classification based on structure-structure alignment of proteins
    • 10.1093/nar/24.1.206, 145583, 8594580
    • Holm L, Sander C. The FSSP database: fold classification based on structure-structure alignment of proteins. Nucleic Acids Res 1996, 24(1):206-209. 10.1093/nar/24.1.206, 145583, 8594580.
    • (1996) Nucleic Acids Res , vol.24 , Issue.1 , pp. 206-209
    • Holm, L.1    Sander, C.2
  • 52
    • 0027991446 scopus 로고
    • The FSSP database of structurally aligned protein fold families
    • 308329, 7937067
    • Holm L, Sander C. The FSSP database of structurally aligned protein fold families. Nucleic Acids Res 1994, 22:3600-3609. 308329, 7937067.
    • (1994) Nucleic Acids Res , vol.22 , pp. 3600-3609
    • Holm, L.1    Sander, C.2
  • 53
    • 0028961335 scopus 로고
    • SCOP: a structural classification of proteins database for the investigation of sequences and structures
    • Murzin AG, Brenner SE, Hubbard T, Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 1995, 247(4):536-540.
    • (1995) J Mol Biol , vol.247 , Issue.4 , pp. 536-540
    • Murzin, A.G.1    Brenner, S.E.2    Hubbard, T.3    Chothia, C.4
  • 54
    • 79952709519 scopus 로고    scopus 로고
    • PROC: an open-source package for R and S+ to analyze and compare ROC curves
    • 10.1186/1471-2105-12-77, 3068975, 21414208
    • Robin X, Turck N, Hainard A, Tiberti N, Lisacek F, Sanchez JC, Müller M. pROC: an open-source package for R and S+ to analyze and compare ROC curves. BMC Bioinformatics 2011, 12:77. 10.1186/1471-2105-12-77, 3068975, 21414208.
    • (2011) BMC Bioinformatics , vol.12 , pp. 77
    • Robin, X.1    Turck, N.2    Hainard, A.3    Tiberti, N.4    Lisacek, F.5    Sanchez, J.C.6    Müller, M.7
  • 55
    • 79951854348 scopus 로고    scopus 로고
    • Dynamic programming re-ranking for PPI interactor and pair extraction in full-text articles
    • 10.1186/1471-2105-12-60, 3053256, 21342534
    • Tsai RT, Lai PT. Dynamic programming re-ranking for PPI interactor and pair extraction in full-text articles. BMC Bioinformatics 2011, 12:60. 10.1186/1471-2105-12-60, 3053256, 21342534.
    • (2011) BMC Bioinformatics , vol.12 , pp. 60
    • Tsai, R.T.1    Lai, P.T.2
  • 56
    • 40049088786 scopus 로고    scopus 로고
    • Structural search and retrieval using a tableau representation of protein folding patterns
    • 10.1093/bioinformatics/btm641, 18175768
    • Konagurthu AS, Stuckey PJ, Lesk AM. Structural search and retrieval using a tableau representation of protein folding patterns. Bioinformatics 2008, 24(5):645-651. 10.1093/bioinformatics/btm641, 18175768.
    • (2008) Bioinformatics , vol.24 , Issue.5 , pp. 645-651
    • Konagurthu, A.S.1    Stuckey, P.J.2    Lesk, A.M.3
  • 57
    • 24344476038 scopus 로고    scopus 로고
    • YAKUSA: a fast structural database scanning method
    • 10.1002/prot.20517, 16049912
    • Carpentier M, Brouillet S, Pothier J. YAKUSA: a fast structural database scanning method. Proteins 2005, 61(1):137-151. 10.1002/prot.20517, 16049912.
    • (2005) Proteins , vol.61 , Issue.1 , pp. 137-151
    • Carpentier, M.1    Brouillet, S.2    Pothier, J.3
  • 58
    • 0033833116 scopus 로고    scopus 로고
    • Protein structure alignment using environmental profiles
    • 10.1093/protein/13.8.535, 10964982
    • Jung J, Lee B. Protein structure alignment using environmental profiles. Protein Eng 2000, 13(8):535-543. 10.1093/protein/13.8.535, 10964982.
    • (2000) Protein Eng , vol.13 , Issue.8 , pp. 535-543
    • Jung, J.1    Lee, B.2
  • 59
    • 0028838717 scopus 로고
    • Threading a database of protein cores
    • 10.1002/prot.340230309, 8710828
    • Madej T, Gibrat JF, Bryant SH. Threading a database of protein cores. Proteins 1995, 23(3):356-369. 10.1002/prot.340230309, 8710828.
    • (1995) Proteins , vol.23 , Issue.3 , pp. 356-369
    • Madej, T.1    Gibrat, J.F.2    Bryant, S.H.3
  • 60
    • 0029936121 scopus 로고    scopus 로고
    • Surprising similarities in structure comparison
    • 10.1016/S0959-440X(96)80058-3, 8804824
    • Gibrat JF, Madej T, Bryant SH. Surprising similarities in structure comparison. Curr Opin Struct Biol 1996, 6(3):377-385. 10.1016/S0959-440X(96)80058-3, 8804824.
    • (1996) Curr Opin Struct Biol , vol.6 , Issue.3 , pp. 377-385
    • Gibrat, J.F.1    Madej, T.2    Bryant, S.H.3
  • 61
    • 0032906118 scopus 로고    scopus 로고
    • Motif-based searching in TOPS protein topology databases
    • 10.1093/bioinformatics/15.4.317, 10320400
    • Gilbert D, Westhead D, Nagano N, Thornton J. Motif-based searching in TOPS protein topology databases. Bioinformatics 1999, 15(4):317-326. 10.1093/bioinformatics/15.4.317, 10320400.
    • (1999) Bioinformatics , vol.15 , Issue.4 , pp. 317-326
    • Gilbert, D.1    Westhead, D.2    Nagano, N.3    Thornton, J.4
  • 62
    • 19544395050 scopus 로고    scopus 로고
    • Protein structure topological comparison, discovery and matching service
    • 10.1093/bioinformatics/bti331, 15741246
    • Torrance G, Gilbert D, Michalopoulos I, Westhead D. Protein structure topological comparison, discovery and matching service. Bioinformatics 2005, 21(10):2537-2538. 10.1093/bioinformatics/bti331, 15741246.
    • (2005) Bioinformatics , vol.21 , Issue.10 , pp. 2537-2538
    • Torrance, G.1    Gilbert, D.2    Michalopoulos, I.3    Westhead, D.4
  • 63
    • 79953744330 scopus 로고    scopus 로고
    • Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach
    • 10.1186/1471-2105-12-S1-S11, 3278827, 22372825
    • Zhang W, Sun F, Jiang R. Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach. BMC Bioinformatics 2011, 12(Suppl 1):S11. 10.1186/1471-2105-12-S1-S11, 3278827, 22372825.
    • (2011) BMC Bioinformatics , vol.12 , Issue.SUPPL. 1
    • Zhang, W.1    Sun, F.2    Jiang, R.3
  • 64
    • 80052785017 scopus 로고    scopus 로고
    • Structator: fast index-based search for RNA sequence-structure patterns
    • 10.1186/1471-2105-12-214, 3154205, 21619640
    • Meyer F, Kurtz S, Backofen R, Will S, Beckstette M. Structator: fast index-based search for RNA sequence-structure patterns. BMC Bioinformatics 2011, 12:214. 10.1186/1471-2105-12-214, 3154205, 21619640.
    • (2011) BMC Bioinformatics , vol.12 , pp. 214
    • Meyer, F.1    Kurtz, S.2    Backofen, R.3    Will, S.4    Beckstette, M.5
  • 66
    • 62349094844 scopus 로고    scopus 로고
    • GPAT: retrieval of genomic annotation from large genomic position datasets
    • 10.1186/1471-2105-9-533, 2654044, 19077303
    • Krebs A, Frontini M, Tora L. GPAT: retrieval of genomic annotation from large genomic position datasets. BMC Bioinformatics 2008, 9:533. 10.1186/1471-2105-9-533, 2654044, 19077303.
    • (2008) BMC Bioinformatics , vol.9 , pp. 533
    • Krebs, A.1    Frontini, M.2    Tora, L.3
  • 67
    • 80555146704 scopus 로고    scopus 로고
    • Bag-of-features based medical image retrieval via multiple assignment and visual words weighting
    • Wang J, Li Y, Zhang Y, Wang C, Xie H, Chen G, Gao X. Bag-of-features based medical image retrieval via multiple assignment and visual words weighting. IEEE Trans Med Imaging 2011, 30(11):1996-2011.
    • (2011) IEEE Trans Med Imaging , vol.30 , Issue.11 , pp. 1996-2011
    • Wang, J.1    Li, Y.2    Zhang, Y.3    Wang, C.4    Xie, H.5    Chen, G.6    Gao, X.7
  • 69
    • 80053044377 scopus 로고    scopus 로고
    • Bag-of-features based classification of breast parenchymal tissue in the mammogram via jointly selecting and weighting visual words
    • Wang J, Li Y, Zhang Y, Xie H, Wang C. Bag-of-features based classification of breast parenchymal tissue in the mammogram via jointly selecting and weighting visual words. 2011 Sixth International Conference on Image and Graphics (ICIG). 2011, 622-627.
    • (2011) 2011 Sixth International Conference on Image and Graphics (ICIG). , pp. 622-627
    • Wang, J.1    Li, Y.2    Zhang, Y.3    Xie, H.4    Wang, C.5
  • 70
    • 79960865535 scopus 로고    scopus 로고
    • Quantized image patches co-occurrence matrix: a new statistical approach for texture classification using image patch exemplars
    • Liu Z, Wang J, Li Y, Zhang Y, Wang C. Quantized image patches co-occurrence matrix: a new statistical approach for texture classification using image patch exemplars. Proceedings of SPIE 8009. 2011, 80092P.
    • (2011) Proceedings of SPIE 8009.
    • Liu, Z.1    Wang, J.2    Li, Y.3    Zhang, Y.4    Wang, C.5


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