Structator: Fast index-based search for RNA sequence-structure patterns

BMC Bioinformatics

Volumn 12, Issue , 2011, Pages

  Meyer, Fernando ^a   Kurtz, Stefan ^a   Backofen, Rolf ^b   Will, Sebastian ^b,c   Beckstette, Michael ^a  

^a UNIVERSITY OF HAMBURG   (Germany)

^b UNIVERSITY OF FREIBURG   (Germany)

^c MASSACHUSETTS INSTITUTE OF TECHNOLOGY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BENCHMARK EXPERIMENTS; COMPLEMENTARITY CONSTRAINT; EXPECTED RUNNING TIME; INDEX DATA STRUCTURES; INTERMEDIATE RESULTS; OPEN-SOURCE SOFTWARES; SEARCH SPACE REDUCTION; STRUCTURAL CONSTRAINTS;

DATA STRUCTURES; DATABASE SYSTEMS; PATTERN MATCHING;

RNA;

RNA;

ALGORITHM; ARTICLE; CHEMISTRY; COMPUTER PROGRAM; CONFORMATION; GENETICS; METHODOLOGY; NUCLEOTIDE SEQUENCE; SEQUENCE ANALYSIS;

ALGORITHMS; BASE SEQUENCE; NUCLEIC ACID CONFORMATION; RNA; SEQUENCE ANALYSIS, RNA; SOFTWARE;

EID: 80052785017     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-12-214     Document Type: Article

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