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Volumn 14, Issue 1, 2013, Pages

Genome-wide mapping of FOXM1 binding reveals co-binding with estrogen receptor alpha in breast cancer cells

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; ESTROGEN RECEPTOR ALPHA; PROTEIN CARM1; THIOSTREPTON; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR FOXM1; UNCLASSIFIED DRUG; COACTIVATOR-ASSOCIATED ARGININE METHYLTRANSFERASE 1; FORKHEAD TRANSCRIPTION FACTOR; FOXM1 PROTEIN, HUMAN; PROTEIN ARGININE METHYLTRANSFERASE; PROTEIN BINDING; TRANSCRIPTOME;

EID: 84872686976     PISSN: 14747596     EISSN: 1474760X     Source Type: Journal    
DOI: 10.1186/gb-2013-14-1-r6     Document Type: Article
Times cited : (109)

References (84)
  • 1
    • 0030786320 scopus 로고    scopus 로고
    • The winged-helix transcription factor Trident is expressed in cycling cells
    • Korver W, Roose J, Clevers H: The winged-helix transcription factor Trident is expressed in cycling cells. Nucleic Acids Res 1997, 25:1715-1719.
    • (1997) Nucleic Acids Res , vol.25 , pp. 1715-1719
    • Korver, W.1    Roose, J.2    Clevers, H.3
  • 2
    • 13944281061 scopus 로고    scopus 로고
    • FoxM1 dances with mitosis
    • Costa RH: FoxM1 dances with mitosis. Nat Cell Biol 2005, 7:108-110.
    • (2005) Nat Cell Biol , vol.7 , pp. 108-110
    • Costa, R.H.1
  • 3
    • 28544449224 scopus 로고    scopus 로고
    • Forkhead box M1 regulates the transcriptional network of genes essential for mitotic progression and genes encoding the SCF (Skp2-Cks1) ubiquitin ligase
    • Wang IC, Chen YJ, Hughes D, Petrovic V, Major ML, Park HJ, Tan Y, Ackerson T, Costa RH: Forkhead box M1 regulates the transcriptional network of genes essential for mitotic progression and genes encoding the SCF (Skp2-Cks1) ubiquitin ligase. Mol Cell Biol 2005, 25:10875-10894.
    • (2005) Mol Cell Biol , vol.25 , pp. 10875-10894
    • Wang, I.C.1    Chen, Y.J.2    Hughes, D.3    Petrovic, V.4    Major, M.L.5    Park, H.J.6    Tan, Y.7    Ackerson, T.8    Costa, R.H.9
  • 4
    • 20444477535 scopus 로고    scopus 로고
    • Loss of the forkhead transcription factor FoxM1 causes centrosome amplification and mitotic catastrophe
    • Wonsey DR, Follettie MT: Loss of the forkhead transcription factor FoxM1 causes centrosome amplification and mitotic catastrophe. Cancer Res 2005, 65:5181-5189.
    • (2005) Cancer Res , vol.65 , pp. 5181-5189
    • Wonsey, D.R.1    Follettie, M.T.2
  • 5
    • 34548588406 scopus 로고    scopus 로고
    • Down-regulation of Forkhead Box M1 transcription factor leads to the inhibition of invasion and angiogenesis of pancreatic cancer cells
    • Wang Z, Banerjee S, Kong D, Li Y, Sarkar FH: Down-regulation of Forkhead Box M1 transcription factor leads to the inhibition of invasion and angiogenesis of pancreatic cancer cells. Cancer Res 2007, 67:8293-8300.
    • (2007) Cancer Res , vol.67 , pp. 8293-8300
    • Wang, Z.1    Banerjee, S.2    Kong, D.3    Li, Y.4    Sarkar, F.H.5
  • 6
    • 79959917607 scopus 로고    scopus 로고
    • FoxM1: a master regulator of tumor metastasis
    • Raychaudhuri P, Park HJ: FoxM1: a master regulator of tumor metastasis. Cancer Res 2011, 71:4329-4333.
    • (2011) Cancer Res , vol.71 , pp. 4329-4333
    • Raychaudhuri, P.1    Park, H.J.2
  • 9
    • 11144280578 scopus 로고    scopus 로고
    • Identification and validation of commonly overexpressed genes in solid tumors by comparison of microarray data
    • Pilarsky C, Wenzig M, Specht T, Saeger HD, Grutzmann R: Identification and validation of commonly overexpressed genes in solid tumors by comparison of microarray data. Neoplasia 2004, 6:744-750.
    • (2004) Neoplasia , vol.6 , pp. 744-750
    • Pilarsky, C.1    Wenzig, M.2    Specht, T.3    Saeger, H.D.4    Grutzmann, R.5
  • 12
    • 77949362533 scopus 로고    scopus 로고
    • Upregulation of FOXM1 induces genomic instability in human epidermal keratinocytes
    • Teh MT, Gemenetzidis E, Chaplin T, Young BD, Philpott MP: Upregulation of FOXM1 induces genomic instability in human epidermal keratinocytes. Mol Cancer 2010, 9:45.
    • (2010) Mol Cancer , vol.9 , pp. 45
    • Teh, M.T.1    Gemenetzidis, E.2    Chaplin, T.3    Young, B.D.4    Philpott, M.P.5
  • 17
    • 79959672853 scopus 로고    scopus 로고
    • Reversal of endocrine resistance in breast cancer: interrelationships among 14-3- 3zeta, FOXM1, and a gene signature associated with mitosis
    • Bergamaschi A, Christensen BL, Katzenellenbogen BS: Reversal of endocrine resistance in breast cancer: interrelationships among 14-3- 3zeta, FOXM1, and a gene signature associated with mitosis. Breast Cancer Res 2011, 13:R70.
    • (2011) Breast Cancer Res , vol.13 , pp. R70
    • Bergamaschi, A.1    Christensen, B.L.2    Katzenellenbogen, B.S.3
  • 18
    • 78650555583 scopus 로고    scopus 로고
    • Breast cancer biomarker discovery in the functional genomic age: a systematic review of 42 gene expression signatures
    • Abba MC, Lacunza E, Butti M, Aldaz CM: Breast cancer biomarker discovery in the functional genomic age: a systematic review of 42 gene expression signatures. Biomarker Insights 2010, 5:103-118.
    • (2010) Biomarker Insights , vol.5 , pp. 103-118
    • Abba, M.C.1    Lacunza, E.2    Butti, M.3    Aldaz, C.M.4
  • 24
    • 79958751940 scopus 로고    scopus 로고
    • Young age, increased tumor proliferation and FOXM1 expression predict early metastatic relapse only for endocrine-dependent breast cancers
    • Yau C, Wang Y, Zhang Y, Foekens JA, Benz CC: Young age, increased tumor proliferation and FOXM1 expression predict early metastatic relapse only for endocrine-dependent breast cancers. Breast Cancer Res Treat 2011, 126:803-810.
    • (2011) Breast Cancer Res Treat , vol.126 , pp. 803-810
    • Yau, C.1    Wang, Y.2    Zhang, Y.3    Foekens, J.A.4    Benz, C.C.5
  • 25
    • 78651250284 scopus 로고    scopus 로고
    • FOXA1 is a key determinant of estrogen receptor function and endocrine response
    • Hurtado A, Holmes KA, Ross-Innes CS, Schmidt D, Carroll JS: FOXA1 is a key determinant of estrogen receptor function and endocrine response. Nat Genet 2011, 43:27-33.
    • (2011) Nat Genet , vol.43 , pp. 27-33
    • Hurtado, A.1    Holmes, K.A.2    Ross-Innes, C.S.3    Schmidt, D.4    Carroll, J.S.5
  • 27
    • 77950529946 scopus 로고    scopus 로고
    • Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
    • McLeay RC, Bailey TL: Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data. BMC Bioinformatics 2010, 11:165.
    • (2010) BMC Bioinformatics , vol.11 , pp. 165
    • McLeay, R.C.1    Bailey, T.L.2
  • 30
    • 84857860452 scopus 로고    scopus 로고
    • The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression
    • Sadasivam S, Duan S, DeCaprio JA: The MuvB complex sequentially recruits B-Myb and FoxM1 to promote mitotic gene expression. Genes Dev 2012, 26:474-489.
    • (2012) Genes Dev , vol.26 , pp. 474-489
    • Sadasivam, S.1    Duan, S.2    DeCaprio, J.A.3
  • 31
    • 84871881824 scopus 로고    scopus 로고
    • The forkhead transcription factor FOXM1 controls cell cycledependent gene expression through an atypical chromatin binding mechanism
    • Chen X, Muller GA, Quaas M, Fischer M, Han N, Stutchbury B, Sharrocks AD, Engeland K: The forkhead transcription factor FOXM1 controls cell cycledependent gene expression through an atypical chromatin binding mechanism. Mol Cell Biol 2012, 33:227-236.
    • (2012) Mol Cell Biol , vol.33 , pp. 227-236
    • Chen, X.1    Muller, G.A.2    Quaas, M.3    Fischer, M.4    Han, N.5    Stutchbury, B.6    Sharrocks, A.D.7    Engeland, K.8
  • 32
    • 82655189429 scopus 로고    scopus 로고
    • A co-ordinated interaction between CTCF and ER in breast cancer cells
    • Ross-Innes CS, Brown GD, Carroll JS: A co-ordinated interaction between CTCF and ER in breast cancer cells. BMC Genomics 2011, 12:593.
    • (2011) BMC Genomics , vol.12 , pp. 593
    • Ross-Innes, C.S.1    Brown, G.D.2    Carroll, J.S.3
  • 33
    • 7244247363 scopus 로고    scopus 로고
    • Estrogen response element-dependent regulation of transcriptional activation of estrogen receptors alpha and beta by coactivators and corepressors
    • Klinge CM, Jernigan SC, Mattingly KA, Risinger KE, Zhang J: Estrogen response element-dependent regulation of transcriptional activation of estrogen receptors alpha and beta by coactivators and corepressors. J Mol Endocrinol 2004, 33:387-410.
    • (2004) J Mol Endocrinol , vol.33 , pp. 387-410
    • Klinge, C.M.1    Jernigan, S.C.2    Mattingly, K.A.3    Risinger, K.E.4    Zhang, J.5
  • 34
    • 1842684035 scopus 로고    scopus 로고
    • Fulvestrant: an oestrogen receptor antagonist with a novel mechanism of action
    • Osborne CK, Wakeling A, Nicholson RI: Fulvestrant: an oestrogen receptor antagonist with a novel mechanism of action. Br J Cancer 2004, 90(Suppl 1):S2-6.
    • (2004) Br J Cancer , vol.90 , pp. S2-S6
    • Osborne, C.K.1    Wakeling, A.2    Nicholson, R.I.3
  • 35
    • 68949154568 scopus 로고    scopus 로고
    • FoxM1 is a general target for proteasome inhibitors
    • Bhat UG, Halasi M, Gartel AL: FoxM1 is a general target for proteasome inhibitors. PloS One 2009, 4:e6593.
    • (2009) PloS One , vol.4 , pp. e6593
    • Bhat, U.G.1    Halasi, M.2    Gartel, A.L.3
  • 36
    • 2642544592 scopus 로고    scopus 로고
    • Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter
    • Metivier R, Penot G, Hubner MR, Reid G, Brand H, Kos M, Gannon F: Estrogen receptor-alpha directs ordered, cyclical, and combinatorial recruitment of cofactors on a natural target promoter. Cell 2003, 115:751-763.
    • (2003) Cell , vol.115 , pp. 751-763
    • Metivier, R.1    Penot, G.2    Hubner, M.R.3    Reid, G.4    Brand, H.5    Kos, M.6    Gannon, F.7
  • 38
    • 33845789120 scopus 로고    scopus 로고
    • The activity and stability of the transcriptional coactivator p/CIP/SRC-3 are regulated by CARM1-dependent methylation
    • Naeem H, Cheng D, Zhao Q, Underhill C, Tini M, Bedford MT, Torchia J: The activity and stability of the transcriptional coactivator p/CIP/SRC-3 are regulated by CARM1-dependent methylation. Mol Cell Biol 2007, 27:120-134.
    • (2007) Mol Cell Biol , vol.27 , pp. 120-134
    • Naeem, H.1    Cheng, D.2    Zhao, Q.3    Underhill, C.4    Tini, M.5    Bedford, M.T.6    Torchia, J.7
  • 40
  • 41
    • 51049106206 scopus 로고    scopus 로고
    • Thiostrepton selectively targets breast cancer cells through inhibition of forkhead box M1 expression
    • Kwok JM, Myatt SS, Marson CM, Coombes RC, Constantinidou D, Lam EW: Thiostrepton selectively targets breast cancer cells through inhibition of forkhead box M1 expression. Mol Cancer Ther 2008, 7:2022-2032.
    • (2008) Mol Cancer Ther , vol.7 , pp. 2022-2032
    • Kwok, J.M.1    Myatt, S.S.2    Marson, C.M.3    Coombes, R.C.4    Constantinidou, D.5    Lam, E.W.6
  • 42
    • 80052111561 scopus 로고    scopus 로고
    • The transcription factor FOXM1 is a cellular target of the natural product thiostrepton
    • Hegde NS, Sanders DA, Rodriguez R, Balasubramanian S: The transcription factor FOXM1 is a cellular target of the natural product thiostrepton. Nat Chem 2011, 3:725-731.
    • (2011) Nat Chem , vol.3 , pp. 725-731
    • Hegde, N.S.1    Sanders, D.A.2    Rodriguez, R.3    Balasubramanian, S.4
  • 45
    • 65949098149 scopus 로고    scopus 로고
    • Thiazole antibiotics target FoxM1 and induce apoptosis in human cancer cells
    • Bhat UG, Halasi M, Gartel AL: Thiazole antibiotics target FoxM1 and induce apoptosis in human cancer cells. PloS One 2009, 4:e5592.
    • (2009) PloS One , vol.4 , pp. e5592
    • Bhat, U.G.1    Halasi, M.2    Gartel, A.L.3
  • 46
    • 84862203852 scopus 로고    scopus 로고
    • FGFR1- induced epithelial to mesenchymal transition through MAPK/ PLCgamma/COX-2-mediated mechanisms
    • Tomlinson DC, Baxter EW, Loadman PM, Hull MA, Knowles MA: FGFR1- induced epithelial to mesenchymal transition through MAPK/ PLCgamma/COX-2-mediated mechanisms. PloS One 2012, 7:e38972.
    • (2012) PloS One , vol.7 , pp. e38972
    • Tomlinson, D.C.1    Baxter, E.W.2    Loadman, P.M.3    Hull, M.A.4    Knowles, M.A.5
  • 47
    • 2442675495 scopus 로고    scopus 로고
    • Blocking of FGFR signaling inhibits breast cancer cell proliferation through downregulation of D-type cyclins
    • Koziczak M, Holbro T, Hynes NE: Blocking of FGFR signaling inhibits breast cancer cell proliferation through downregulation of D-type cyclins. Oncogene 2004, 23:3501-3508.
    • (2004) Oncogene , vol.23 , pp. 3501-3508
    • Koziczak, M.1    Holbro, T.2    Hynes, N.E.3
  • 49
    • 34548561788 scopus 로고    scopus 로고
    • PLD1 is overexpressed in an ER-negative MCF-7 cell line variant and a subset of phospho-Akt-negative breast carcinomas
    • Gozgit JM, Pentecost BT, Marconi SA, Ricketts-Loriaux RS, Otis CN, Arcaro KF: PLD1 is overexpressed in an ER-negative MCF-7 cell line variant and a subset of phospho-Akt-negative breast carcinomas. Br J Cancer 2007, 97:809-817.
    • (2007) Br J Cancer , vol.97 , pp. 809-817
    • Gozgit, J.M.1    Pentecost, B.T.2    Marconi, S.A.3    Ricketts-Loriaux, R.S.4    Otis, C.N.5    Arcaro, K.F.6
  • 50
    • 1242338758 scopus 로고    scopus 로고
    • Selective estrogen receptor modulators: discrimination of agonistic versus antagonistic activities by gene expression profiling in breast cancer cells
    • Frasor J, Stossi F, Danes JM, Komm B, Lyttle CR, Katzenellenbogen BS: Selective estrogen receptor modulators: discrimination of agonistic versus antagonistic activities by gene expression profiling in breast cancer cells. Cancer Res 2004, 64:1522-1533.
    • (2004) Cancer Res , vol.64 , pp. 1522-1533
    • Frasor, J.1    Stossi, F.2    Danes, J.M.3    Komm, B.4    Lyttle, C.R.5    Katzenellenbogen, B.S.6
  • 51
    • 33745603978 scopus 로고    scopus 로고
    • An estrogen receptor-negative breast cancer subset characterized by a hormonally regulated transcriptional program and response to androgen
    • Doane AS, Danso M, Lal P, Donaton M, Zhang L, Hudis C, Gerald WL: An estrogen receptor-negative breast cancer subset characterized by a hormonally regulated transcriptional program and response to androgen. Oncogene 2006, 25:3994-4008.
    • (2006) Oncogene , vol.25 , pp. 3994-4008
    • Doane, A.S.1    Danso, M.2    Lal, P.3    Donaton, M.4    Zhang, L.5    Hudis, C.6    Gerald, W.L.7
  • 53
    • 38849091433 scopus 로고    scopus 로고
    • Tamoxifen resistance in breast tumors is driven by growth factor receptor signaling with repression of classic estrogen receptor genomic function
    • Massarweh S, Osborne CK, Creighton CJ, Qin L, Tsimelzon A, Huang S, Weiss H, Rimawi M, Schiff R: Tamoxifen resistance in breast tumors is driven by growth factor receptor signaling with repression of classic estrogen receptor genomic function. Cancer Res 2008, 68:826-833.
    • (2008) Cancer Res , vol.68 , pp. 826-833
    • Massarweh, S.1    Osborne, C.K.2    Creighton, C.J.3    Qin, L.4    Tsimelzon, A.5    Huang, S.6    Weiss, H.7    Rimawi, M.8    Schiff, R.9
  • 58
    • 0034666108 scopus 로고    scopus 로고
    • STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene
    • Snel B, Lehmann G, Bork P, Huynen MA: STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene. Nucleic Acids Res 2000, 28:3442-3444.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3442-3444
    • Snel, B.1    Lehmann, G.2    Bork, P.3    Huynen, M.A.4
  • 61
    • 84858831140 scopus 로고    scopus 로고
    • FOXM1 induces a global methylation signature that mimics the cancer epigenome in head and neck squamous cell carcinoma
    • Teh MT, Gemenetzidis E, Patel D, Tariq R, Nadir A, Bahta AW, Waseem A, Hutchison IL: FOXM1 induces a global methylation signature that mimics the cancer epigenome in head and neck squamous cell carcinoma. PloS One 2012, 7:e34329.
    • (2012) PloS One , vol.7 , pp. e34329
    • Teh, M.T.1    Gemenetzidis, E.2    Patel, D.3    Tariq, R.4    Nadir, A.5    Bahta, A.W.6    Waseem, A.7    Hutchison, I.L.8
  • 64
    • 39149092383 scopus 로고    scopus 로고
    • CARM1 regulates estrogenstimulated breast cancer growth through up-regulation of E2F1
    • Frietze S, Lupien M, Silver PA, Brown M: CARM1 regulates estrogenstimulated breast cancer growth through up-regulation of E2F1. Cancer Res 2008, 68:301-306.
    • (2008) Cancer Res , vol.68 , pp. 301-306
    • Frietze, S.1    Lupien, M.2    Silver, P.A.3    Brown, M.4
  • 65
    • 1642382817 scopus 로고    scopus 로고
    • Forkhead box M1B transcriptional activity requires binding of Cdk-cyclin complexes for phosphorylationdependent recruitment of p300/CBP coactivators
    • Major ML, Lepe R, Costa RH: Forkhead box M1B transcriptional activity requires binding of Cdk-cyclin complexes for phosphorylationdependent recruitment of p300/CBP coactivators. Mol Cell Biol 2004, 24:2649-2661.
    • (2004) Mol Cell Biol , vol.24 , pp. 2649-2661
    • Major, M.L.1    Lepe, R.2    Costa, R.H.3
  • 66
    • 33746216564 scopus 로고    scopus 로고
    • Transcription factor FOXM1c is repressed by RB and activated by cyclin D1/Cdk4
    • Wierstra I, Alves J: Transcription factor FOXM1c is repressed by RB and activated by cyclin D1/Cdk4. Biol Chem 2006, 387:949-962.
    • (2006) Biol Chem , vol.387 , pp. 949-962
    • Wierstra, I.1    Alves, J.2
  • 67
    • 33746780589 scopus 로고    scopus 로고
    • FOXM1c is activated by cyclin E/Cdk2, cyclin A/Cdk2, and cyclin A/Cdk1, but repressed by GSK-3alpha
    • Wierstra I, Alves J: FOXM1c is activated by cyclin E/Cdk2, cyclin A/Cdk2, and cyclin A/Cdk1, but repressed by GSK-3alpha. Biochem Biophys Res Commun 2006, 348:99-108.
    • (2006) Biochem Biophys Res Commun , vol.348 , pp. 99-108
    • Wierstra, I.1    Alves, J.2
  • 69
    • 80053005154 scopus 로고    scopus 로고
    • Protein phosphatase 2A (B55alpha) prevents premature activation of forkhead transcription factor FoxM1 by antagonizing cyclin A/cyclin-dependent kinase-mediated phosphorylation
    • Alvarez-Fernandez M, Halim VA, Aprelia M, Laoukili J, Mohammed S, Medema RH: Protein phosphatase 2A (B55alpha) prevents premature activation of forkhead transcription factor FoxM1 by antagonizing cyclin A/cyclin-dependent kinase-mediated phosphorylation. J Biol Chem 2011, 286:33029-33036.
    • (2011) J Biol Chem , vol.286 , pp. 33029-33036
    • Alvarez-Fernandez, M.1    Halim, V.A.2    Aprelia, M.3    Laoukili, J.4    Mohammed, S.5    Medema, R.H.6
  • 70
    • 77954412025 scopus 로고    scopus 로고
    • Negative regulation of the oncogenic transcription factor FoxM1 by thiazolidinediones and mithramycin
    • Petrovic V, Costa RH, Lau LF, Raychaudhuri P, Tyner AL: Negative regulation of the oncogenic transcription factor FoxM1 by thiazolidinediones and mithramycin. Cancer Biol Ther 2010, 9:1008-1016.
    • (2010) Cancer Biol Ther , vol.9 , pp. 1008-1016
    • Petrovic, V.1    Costa, R.H.2    Lau, L.F.3    Raychaudhuri, P.4    Tyner, A.L.5
  • 73
    • 84955666545 scopus 로고    scopus 로고
    • Gene Expression Omnibus
    • Gene Expression Omnibus. [http://www.ncbi.nlm.nih.gov/geo/].
  • 74
    • 67649834440 scopus 로고    scopus 로고
    • ChIPseq: using high-throughput sequencing to discover protein-DNA interactions
    • Schmidt D, Wilson MD, Spyrou C, Brown GD, Hadfield J, Odom DT: ChIPseq: using high-throughput sequencing to discover protein-DNA interactions. Methods 2009, 48:240-248.
    • (2009) Methods , vol.48 , pp. 240-248
    • Schmidt, D.1    Wilson, M.D.2    Spyrou, C.3    Brown, G.D.4    Hadfield, J.5    Odom, D.T.6
  • 75
    • 75249087100 scopus 로고    scopus 로고
    • edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson MD, McCarthy DJ, Smyth GK: edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 2010, 26:139-140.
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 76
    • 84858041341 scopus 로고    scopus 로고
    • Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation
    • McCarthy DJ, Chen Y, Smyth GK: Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation. Nucleic Acids Res 2012, 40:4288-4297.
    • (2012) Nucleic Acids Res , vol.40 , pp. 4288-4297
    • McCarthy, D.J.1    Chen, Y.2    Smyth, G.K.3
  • 77
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview-extensible visualization of microarray data
    • Saldanha AJ: Java Treeview-extensible visualization of microarray data. Bioinformatics 2004, 20:3246-3248.
    • (2004) Bioinformatics , vol.20 , pp. 3246-3248
    • Saldanha, A.J.1
  • 78
    • 70349871718 scopus 로고    scopus 로고
    • CEAS: cis-regulatory element annotation system
    • Shin H, Liu T, Manrai AK, Liu XS: CEAS: cis-regulatory element annotation system. Bioinformatics 2009, 25:2605-2606.
    • (2009) Bioinformatics , vol.25 , pp. 2605-2606
    • Shin, H.1    Liu, T.2    Manrai, A.K.3    Liu, X.S.4
  • 79
    • 84955642084 scopus 로고    scopus 로고
    • Cistrome
    • Cistrome. [http://cistrome.org/ap/].
  • 80
    • 84955696142 scopus 로고    scopus 로고
    • wordcloud
    • wordcloud. [http://CRAN.R-project.org/package=wordcloud].
  • 81
    • 79960610118 scopus 로고    scopus 로고
    • REVIGO summarizes and visualizes long lists of gene ontology terms
    • Supek F, Bosnjak M, Skunca N, Smuc T: REVIGO summarizes and visualizes long lists of gene ontology terms. PLoS One 2011, 6:e21800.
    • (2011) PLoS One , vol.6 , pp. e21800
    • Supek, F.1    Bosnjak, M.2    Skunca, N.3    Smuc, T.4
  • 82
    • 42349096296 scopus 로고    scopus 로고
    • Proteomic identification of the MYST domain histone acetyltransferase TIP60 (HTATIP) as a co-activator of the myeloid transcription factor C/EBPalpha
    • Bararia D, Trivedi AK, Zada AA, Greif PA, Mulaw MA, Christopeit M, Hiddemann W, Bohlander SK, Behre G: Proteomic identification of the MYST domain histone acetyltransferase TIP60 (HTATIP) as a co-activator of the myeloid transcription factor C/EBPalpha. Leukemia 2008, 22:800-807.
    • (2008) Leukemia , vol.22 , pp. 800-807
    • Bararia, D.1    Trivedi, A.K.2    Zada, A.A.3    Greif, P.A.4    Mulaw, M.A.5    Christopeit, M.6    Hiddemann, W.7    Bohlander, S.K.8    Behre, G.9
  • 83
    • 84955664563 scopus 로고    scopus 로고
    • Gene Set Enrichment Analysis. [http://www.broadinstitute.org/gsea/].
  • 84
    • 84955689223 scopus 로고    scopus 로고
    • The R Project for Statistical Computing
    • The R Project for Statistical Computing. [http://www.R-project.org].


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.