MDTRA: A molecular dynamics trajectory analyzer with a graphical user interface

Journal of Computational Chemistry

Volumn 34, Issue 4, 2013, Pages 319-325

  Popov, Alexander V ^a   Vorobjev, Yury N ^a   Zharkov, Dmitry O ^a  

^a INSTITUTE OF CHEMICAL BIOLOGY AND FUNDAMENTAL MEDICINE   (Russian Federation)

Author keywords

base excision repair; Fpg; graphical user interface; molecular dynamics; open source software; proteins; trajectory analysis

Indexed keywords

BASE EXCISION REPAIRS; CROSS-PLATFORM; DNA-REPAIR ENZYMES; FPG; GLYCOSYLASE; INTER-ATOMIC DISTANCES; MOLECULAR DYNAMICS SIMULATIONS; MOLECULAR DYNAMICS TRAJECTORIES; OPEN-SOURCE; OPEN-SOURCE SOFTWARES; PROTEIN DATA BANK; ROOT-MEAN SQUARE DEVIATION; TRAJECTORY ANALYSIS;

ESCHERICHIA COLI; GRAPHICAL USER INTERFACES; PROTEINS; TRAJECTORIES;

MOLECULAR DYNAMICS;

DNA FORMAMIDOPYRIMIDINE GLYCOSYLASE;

ARTICLE; CHEMISTRY; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; ENZYMOLOGY; ESCHERICHIA COLI; MOLECULAR DYNAMICS;

COMPUTER GRAPHICS; DNA-FORMAMIDOPYRIMIDINE GLYCOSYLASE; ESCHERICHIA COLI; MOLECULAR DYNAMICS SIMULATION; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 84872596193     PISSN: 01928651     EISSN: 1096987X     Source Type: Journal    
DOI: 10.1002/jcc.23135     Document Type: Article

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