메뉴 건너뛰기




Volumn 55, Issue 6, 2012, Pages 2195-2212

Influence of mass burial of animal carcasses on the types and quantities of microorganisms within a burial site

Author keywords

Contamination; Cpn60; Groundwater; Livestock burial; Microbial transport; Microorganisms.

Indexed keywords

16S RRNA GENE; AMMONIUM CONCENTRATIONS; AMMONIUM OXIDATION; ANAEROBIC MICROORGANISMS; ANIMAL CARCASS; BURIAL DEPTHS; BURIAL SITES; CHRONIC WASTING DISEASE; COMMUNITY COMPOSITION; CONTROL MEASURES; CPN60; LIVESTOCK BURIAL; METAL REDUCTION; MICROBIAL COMMUNITIES; MICROBIAL TRANSPORT; MOLECULAR ASSAYS; OPERATIONAL TAXONOMIC UNITS; ORDERS OF MAGNITUDE; PHOSPHATE ACCUMULATION; PORE WATERS; PYROSEQUENCING; QUANTITATIVE PCR; SITE EVALUATION;

EID: 84872558646     PISSN: 21510032     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (5)

References (76)
  • 2
    • 34547493885 scopus 로고    scopus 로고
    • Activity and diversity of Fe(III)-reducing bacteria in a 3000-year-old acid mine drainage site analogue
    • DOI 10.1080/01490450701456974, PII 780799907
    • Adams, L. K., J. M. Harrison, J. R. Lloyd, S. Langley, and D. Fortin. 2007. Activity and diversity of Fe(III)-reducing bacteria in a 3000-year-old acid mine drainage site analogue. Geomicrobiol. J. 24(3-4): 295-305. (Pubitemid 47180061)
    • (2007) Geomicrobiology Journal , vol.24 , Issue.3-4 , pp. 295-305
    • Adams, L.K.1    Harrison, J.M.2    Lloyd, J.R.3    Langley, S.4    Fortin, D.5
  • 3
    • 84872541541 scopus 로고    scopus 로고
    • 2010 FMD outbreak in Korea: Government's response to this emergency and important lessons learned
    • East Lansing, Mich.: Michigan State University, Department of Animal Science
    • Ahn, H. 2012. 2010 FMD outbreak in Korea: Government's response to this emergency and important lessons learned. In Proc. 4th Intl. Symposium on Animal By-Products. East Lansing, Mich.: Michigan State University, Department of Animal Science.
    • (2012) Proc. 4th Intl. Symposium on Animal By-Products
    • Ahn, H.1
  • 4
    • 77956470482 scopus 로고    scopus 로고
    • The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments
    • SEPT.
    • Aklujkar, M., N. D. Young, D. Holmes, M. Chavan, C. Risso, H. E. Kiss, C. S. Han, M. L. Land, and D. R. Lovley. 2010. The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environments. BMC Genomics 11(Sept.): 490.
    • (2010) BMC Genomics , vol.11 , pp. 490
    • Aklujkar, M.1    Young, N.D.2    Holmes, D.3    Chavan, M.4    Risso, C.5    Kiss, H.E.6    Han, C.S.7    Land, M.L.8    Lovley, D.R.9
  • 6
    • 0030619419 scopus 로고    scopus 로고
    • Azospirillum-plant relationships: Environmental and physiological advances (1990-1996)
    • Bashan, Y., and G. Holguin. 1997. Azospirillum-plant relationships: Environmental and physiological advances (1990-1996). Canadian J. Microbiol. 43(2): 103-121.
    • (1997) Canadian J. Microbiol. , vol.43 , Issue.2 , pp. 103-121
    • Bashan, Y.1    Holguin, G.2
  • 7
    • 77953436072 scopus 로고    scopus 로고
    • Phylogenetic identification of three strains of rhizosphere bacteria based on the results of 16s rRNA gene analysis and genetic typing
    • Bazhanov, D. P., K. K. Yatsevich, and A. A. Bazhanova. 2010. Phylogenetic identification of three strains of rhizosphere bacteria based on the results of 16s rRNA gene analysis and genetic typing. Microbiology 79(3): 374-384.
    • (2010) Microbiology , vol.79 , Issue.3 , pp. 374-384
    • Bazhanov, D.P.1    Yatsevich, K.K.2    Bazhanova, A.A.3
  • 8
    • 0030613913 scopus 로고    scopus 로고
    • A new high-pressure squeezing technique for pore fluid extraction from terrestrial soils
    • Böttcher, G., H. J. Brumsack, H. Heinrichs, and M. Pohlmann. 1997. A new high-pressure squeezing technique for pore fluid extraction from terrestrial soils. Water, Air, and Soil Pollution 94(3-4): 289-296.
    • (1997) Water, Air, and Soil Pollution , vol.94 , Issue.3-4 , pp. 289-296
    • Böttcher, G.1    Brumsack, H.J.2    Heinrichs, H.3    Pohlmann, M.4
  • 10
    • 84856747520 scopus 로고    scopus 로고
    • A molecular enrichment strategy based on cpn60 for detection of epsilonproteobacteria in the dog fecal microbiome
    • Chaban, B., M. G. Links, and J. E. Hill. 2011. A molecular enrichment strategy based on cpn60 for detection of epsilonproteobacteria in the dog fecal microbiome. Microbial Ecol. 63(2): 348-357.
    • (2011) Microbial Ecol , vol.63 , Issue.2 , pp. 348-357
    • Chaban, B.1    Links, M.G.2    Hill, J.E.3
  • 11
    • 0001463548 scopus 로고
    • Non-Parametric estimation of the number of classes in a population
    • Chao, A. 1984. Non-parametric estimation of the number of classes in a population. Scandanavian J. Statistics 11(4): 265-270.
    • (1984) Scandanavian J. Statistics , vol.11 , Issue.4 , pp. 265-270
    • Chao, A.1
  • 13
    • 0036324056 scopus 로고    scopus 로고
    • High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates
    • DOI 10.1128/AEM.68.8.3878-3885.2002
    • Connon, S. A., and S. J. Giovannoni. 2002. High-throughput methods for culturing microorganisms in very-low-nutrient media yield diverse new marine isolates. Applied and Environ. Microbiol. 68(8): 3878-3885. (Pubitemid 34836698)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.8 , pp. 3878-3885
    • Connon, S.A.1    Giovannoni, S.J.2
  • 14
    • 0034051181 scopus 로고    scopus 로고
    • Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation
    • DOI 10.1128/AEM.66.3.1175-1182.2000
    • Crocetti, G. R., P. Hugenholtz, P. L. Bond, A. Schuler, J. Keller, D. Jenkins, and L. L. Blackall. 2000. Identification of polyphosphate-accumulating organisms and design of 16S rRNA-directed probes for their detection and quantitation. Appl. Environ. Microbiol. 66(3): 1175-1182. (Pubitemid 30130043)
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.3 , pp. 1175-1182
    • Crocetti, G.R.1    Hugenholtz, P.2    Bond, P.L.3    Schuler, A.4    Keller, J.5    Jenkins, D.6    Blackall, L.L.7
  • 15
    • 29044443396 scopus 로고    scopus 로고
    • Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target
    • DOI 10.1016/j.mimet.2005.04.006, PII S0167701205001235
    • Dumonceaux, T. J., J. E. Hill, S. A. Briggs, K. K. Amoako, S. M. Hemmingsen, and A. G. Van Kessel. 2006. Enumeration of specific bacterial populations in complex intestinal communities using quantitative PCR based on the chaperonin-60 target. J. Microbiol. Methods 64(1): 46-62. (Pubitemid 41790486)
    • (2006) Journal of Microbiological Methods , vol.64 , Issue.1 , pp. 46-62
    • Dumonceaux, T.J.1    Hill, J.E.2    Briggs, S.A.3    Amoako, K.K.4    Hemmingsen, S.M.5    Van Kessel, A.G.6
  • 16
    • 0033916615 scopus 로고    scopus 로고
    • Culturability and in situ abundance of pelagic Bacteria from the North Sea
    • DOI 10.1128/AEM.66.7.3044-3051.2000
    • Eilers, H., J. Pernthaler, F. O. Glöckner, and R. Amann. 2000. Culturability and in situ abundance of pelagic bacteria from the North Sea. Applied and Environ. Microbiol. 66(7): 3044-3051. (Pubitemid 30497616)
    • (2000) Applied and Environmental Microbiology , vol.66 , Issue.7 , pp. 3044-3051
    • Eilers, H.1    Pernthaler, J.2    Glockner, F.O.3    Amann, R.4
  • 17
    • 0036793702 scopus 로고    scopus 로고
    • Ammonia production by ruminal microorganisms and enumeration, isolation, and characterization of bacteria capable of growth on peptides and amino acids from the sheep rumen
    • DOI 10.1128/AEM.68.10.4925-4931.2002
    • Eschenlauer, S. C. P., N. McKain, N. D. Walker, N. R. McEwan, C. J. Newbold, and R. J. Wallace. 2002. Ammonia production by ruminal microorganisms and enumeration, isolation, and characterization of bacteria capable of growth on peptides and amino acids from the sheep rumen. Applied and Environ. Microbiol. 68(10): 4925-4931. (Pubitemid 35154801)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.10 , pp. 4925-4931
    • Eschenlauer, S.C.P.1    McKain, N.2    Walker, N.D.3    McEwan, N.R.4    Newbold, C.J.5    Wallace, R.J.6
  • 18
    • 0003505334 scopus 로고    scopus 로고
    • 21st ed. Washington, D.C.: American Public Health Association, American Water Works Association, Water Environment Federation
    • Franson, M. A. H. 2005. Standard Methods for the Examination of Water and Wastewater. 21st ed. Washington, D.C.: American Public Health Association, American Water Works Association, Water Environment Federation.
    • (2005) Standard Methods for the Examination of Water and Wastewater
    • Franson, M.A.H.1
  • 20
    • 0000803388 scopus 로고
    • The population frequencies of species and the estimation of population parameters
    • Good, I. J. 1953. The population frequencies of species and the estimation of population parameters. Biometrika 40(3-4): 237-264.
    • (1953) Biometrika , vol.40 , Issue.3-4 , pp. 237-264
    • Good, I.J.1
  • 21
    • 79952007388 scopus 로고    scopus 로고
    • Soil beneficial bacteria and their role in plant growth promotion: A review
    • Hayat, R., S. Ali, U. Amara, R. Khalid, and I. Ahmed. 2010. Soil beneficial bacteria and their role in plant growth promotion: A review. Annals of Microbiol. 60(4): 579-598.
    • (2010) Annals of Microbiol. , vol.60 , Issue.4 , pp. 579-598
    • Hayat, R.1    Ali, S.2    Amara, U.3    Khalid, R.4    Ahmed, I.5
  • 24
    • 0037314132 scopus 로고    scopus 로고
    • Using ecological diversity measures with bacterial communities
    • DOI 10.1016/S0168-6496(02)00449-X, PII S016864960200449X
    • Hill, T. C. J., K. A. Walsh, J. A. Harris, and B. F. Moffett. 2003. Using ecological diversity measures with bacterial communities. FEMS Microbiol. Ecology 43(1): 1-11. (Pubitemid 36173508)
    • (2003) FEMS Microbiology Ecology , vol.43 , Issue.1 , pp. 1-11
    • Hill, T.C.J.1    Walsh, K.A.2    Harris, J.A.3    Moffett, B.F.4
  • 25
    • 84988146086 scopus 로고
    • Effects of sampling technique on measurements of porewater constituents in salt marsh sediments
    • Howes, B. L. 1985. Effects of sampling technique on measurements of porewater constituents in salt marsh sediments. Limnol. and Oceanography 30(1): 221.
    • (1985) Limnol. and Oceanography , vol.30 , Issue.1 , pp. 221
    • Howes, B.L.1
  • 26
    • 0035487318 scopus 로고    scopus 로고
    • Counting the Uncountable: Statistical Approaches to Estimating Microbial Diversity
    • DOI 10.1128/AEM.67.10.4399-4406.2001
    • Hughes, J. B., J. J. Hellmann, T. H. Ricketts, and B. J. M. Bohannan. 2001. Counting the uncountable: Statistical approaches to estimating microbial diversity. Applied and Environ. Microbiol. 67(10): 4399-4406. (Pubitemid 33646064)
    • (2001) Applied and Environmental Microbiology , vol.67 , Issue.10 , pp. 4399-4406
    • Hughes, J.B.1    Hellmann, J.J.2    Ricketts, T.H.3    Bohannan, B.J.M.4
  • 27
    • 33847702910 scopus 로고    scopus 로고
    • MEGAN analysis of metagenomic data
    • DOI 10.1101/gr.5969107
    • Huson, D. H., A. F. Auch, J. Qi, and S. C. Schuster. 2007. MEGAN analysis of metagenomic data. Genome Res. 17(3): 377-386. (Pubitemid 46376747)
    • (2007) Genome Research , vol.17 , Issue.3 , pp. 377-386
    • Huson, D.H.1    Auch, A.F.2    Qi, J.3    Schuster, S.C.4
  • 29
    • 0024220651 scopus 로고
    • A simple, reliable, and inexpensive porewater sampler
    • Jahnke, R. A. 1988. A simple, reliable, and inexpensive porewater sampler. Limnol. and Oceanography 33(3): 483-487.
    • (1988) Limnol. and Oceanography , vol.33 , Issue.3 , pp. 483-487
    • Jahnke, R.A.1
  • 30
    • 27644557432 scopus 로고    scopus 로고
    • Anammox organisms: Enrichment, cultivation, and environmental analysis
    • DOI 10.1016/S0076-6879(05)97003-1, PII S0076687905970031, Environmental Microbiology
    • Jetten, M., M. Schmid, K. Van De Pas-Schoonen, J. S. Damsté, and M. Strous. 2005. Anammox organisms: Enrichment, cultivation, and environmental analysis. Methods in Enzymol. 397: 34-57. (Pubitemid 41562893)
    • (2005) Methods in Enzymology , vol.397 , pp. 34-57
    • Jetten, M.1    Schmid, M.2    Van De Pas-Schoonen, K.3    Damste, J.S.4    Strous, M.5
  • 31
    • 77953506415 scopus 로고    scopus 로고
    • Phosphorus-solubilizing bacteria: Occurrence, mechanisms, and their role in crop production
    • Khan, A. A., G. Jilani, M. S. Akhtar, S. M. S. Naqvi, and M. Rasheen. 2009. Phosphorus-solubilizing bacteria: Occurrence, mechanisms, and their role in crop production. J. Agric. Biol. Sci. 1(1): 48-58.
    • (2009) J. Agric. Biol. Sci. , vol.1 , Issue.1 , pp. 48-58
    • Khan, A.A.1    Jilani, G.2    Akhtar, M.S.3    Naqvi, S.M.S.4    Rasheen, M.5
  • 32
    • 0029786831 scopus 로고    scopus 로고
    • Nonradioactive method to study genetic profiles of natural bacterial communities by PCR-single-strand-conformation polymorphism
    • Lee, D., Y. Zo, and S. Kim. 1996. Nonradioactive method to study genetic profiles of natural bacterial communities by PCRsingle-strand-conformation polymorphism. Appl. Environ. Microbiol. 62(9): 3112-3120. (Pubitemid 26304088)
    • (1996) Applied and Environmental Microbiology , vol.62 , Issue.9 , pp. 3112-3120
    • Lee, D.-H.1    Zo, Y.-G.2    Kim, S.-J.3
  • 33
    • 78049384902 scopus 로고    scopus 로고
    • Pusillimonas soli sp. Nov., isolated from farm soil
    • Lee, M., S.-G. Woo, M. Chae, and L. N. Ten. 2010. Pusillimonas soli sp. nov., isolated from farm soil. Intl. J. Syst. Evol. Microbiol. 60(10): 2326-2330.
    • (2010) Intl. J. Syst. Evol. Microbiol. , vol.60 , Issue.10 , pp. 2326-2330
    • Lee, M.1    Woo, S.-G.2    Chae, M.3    Ten, L.N.4
  • 34
    • 70849101625 scopus 로고    scopus 로고
    • Electrochemical activation of nitrate reduction to nitrogen by Ochrobactrum sp. G3-1 using a noncompartmented electrochemical bioreactor
    • Lee, W. J., and D. H. Park. 2009. Electrochemical activation of nitrate reduction to nitrogen by Ochrobactrum sp. G3-1 using a noncompartmented electrochemical bioreactor. J. Microbiol. and Biotech. 19(8): 836-844.
    • (2009) J. Microbiol. and Biotech. , vol.19 , Issue.8 , pp. 836-844
    • Lee, W.J.1    Park, D.H.2
  • 35
    • 33745634395 scopus 로고    scopus 로고
    • Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
    • DOI 10.1093/bioinformatics/btl158
    • Li, W., and A. Godzik. 2006. Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics (Oxford) 22(13): 1658-1659. (Pubitemid 43985301)
    • (2006) Bioinformatics , vol.22 , Issue.13 , pp. 1658-1659
    • Li, W.1    Godzik, A.2
  • 37
    • 84869994230 scopus 로고    scopus 로고
    • The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data
    • doi: 10.1371/journal.pone.0049755
    • Links, M. G., T. J. Dumonceaux, S. M. Hemmingsen, and J. E. Hill. 2012. The chaperonin-60 universal target is a barcode for bacteria that enables de novo assembly of metagenomic sequence data. PLoS ONE 7(11): e49755, doi: 10.1371/journal.pone.0049755.
    • (2012) PLoS ONE , vol.7 , Issue.11
    • Links, M.G.1    Dumonceaux, T.J.2    Hemmingsen, S.M.3    Hill, J.E.4
  • 38
    • 0027380839 scopus 로고
    • Dissimilatory metal reduction
    • Lovley, D. R. 1993. Dissimilatory metal reduction. Ann. Rev. Microbiol. 47(1): 263-290. (Pubitemid 23302935)
    • (1993) Annual Review of Microbiology , vol.47 , pp. 263-290
    • Lovley, D.R.1
  • 41
    • 0024484611 scopus 로고
    • Subsurface transport of contaminants. Mobile colloids in the subsurface environment may alter the transport of contaminants
    • McCarthy, J. F., and J. M. Zachara. 1989. Subsurface transport of contaminants: Mobile colloids in the subsurface environment may alter the transport of contaminants. Environ. Sci. and Tech. 23(5): 496-502. (Pubitemid 19120733)
    • (1989) Environmental Science and Technology , vol.23 , Issue.5 , pp. 496-502
    • McCarthy, J.F.1    Zachara, J.M.2
  • 42
    • 67650763443 scopus 로고    scopus 로고
    • Visual and statistical comparison of metagenomes
    • Mitra, S., B. Klar, and D. H. Huson. 2009. Visual and statistical comparison of metagenomes. Bioinformatics 25(15): 1849-1855.
    • (2009) Bioinformatics , vol.25 , Issue.15 , pp. 1849-1855
    • Mitra, S.1    Klar, B.2    Huson, D.H.3
  • 44
    • 79951926011 scopus 로고    scopus 로고
    • Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils
    • doi: 10.1371/journal.pone.0017000
    • Nacke, H., A. Thürmer, A. Wollherr, C. Will, L. Hodac, N. Herold, I. Schöning, M. Schrumpf, and R. Daniel. 2011. Pyrosequencing-based assessment of bacterial community structure along different management types in German forest and grassland soils. PLoS ONE 6(2): e17000, doi: 10.1371/journal.pone.0017000.
    • (2011) PLoS ONE , vol.6 , Issue.2
    • Nacke, H.1    Thürmer, A.2    Wollherr, A.3    Will, C.4    Hodac, L.5    Herold, N.6    Schöning, I.7    Schrumpf, M.8    Daniel, R.9
  • 45
    • 70350571658 scopus 로고    scopus 로고
    • The chemical and functional characterization of soil N and its biotic components
    • Nannipieri, P., and P. Eldor. 2009. The chemical and functional characterization of soil N and its biotic components. Soil Biol. and Biochem. 41(12): 2357-2369.
    • (2009) Soil Biol. and Biochem. , vol.41 , Issue.12 , pp. 2357-2369
    • Nannipieri, P.1    Eldor, P.2
  • 48
    • 33749382349 scopus 로고    scopus 로고
    • Molecular analysis of ammonia-oxidizing bacteria community in intermittent aeration sequencing batch reactors used for animal wastewater treatment
    • DOI 10.1111/j.1462-2920.2006.01078.x
    • Otawa, K., R. Asano, Y. Ohba, T. Sasaki, E. Kawamura, F. Koyama, S. Nakamura, and Y. Nakai. 2006. Molecular analysis of ammonia-oxidizing bacteria community in intermittent aeration sequencing batch reactors used for animal wastewater treatment. Environ. Microbiol. 8(11): 1985-1996. (Pubitemid 44506894)
    • (2006) Environmental Microbiology , vol.8 , Issue.11 , pp. 1985-1996
    • Otawa, K.1    Asano, R.2    Ohba, Y.3    Sasaki, T.4    Kawamura, E.5    Koyama, F.6    Nakamura, S.7    Nakai, Y.8
  • 49
    • 33947115487 scopus 로고    scopus 로고
    • Presence and activity of anammox and denitrification process in low ammonium-fed bioreactors
    • DOI 10.1016/j.biortech.2006.08.014, PII S0960852406004251
    • Pathak, B. K., F. Kazama, Y. Saiki, and T. Sumino. 2007. Presence and activity of anammox and denitrification process in low ammonium-fed bioreactors. Bioresource Tech. 98(11): 2201-2206. (Pubitemid 46400436)
    • (2007) Bioresource Technology , vol.98 , Issue.11 , pp. 2201-2206
    • Pathak, B.K.1    Kazama, F.2    Saiki, Y.3    Sumino, T.4
  • 51
    • 84871345908 scopus 로고    scopus 로고
    • MS thesis. Saskatoon, Saskatchewan, Canada: University of Saskatchewan, Department of Agricultural and Bioresources Engineering
    • Pratt, D. L. 2009. Environmental impact of livestock mortalities burial. MS thesis. Saskatoon, Saskatchewan, Canada: University of Saskatchewan, Department of Agricultural and Bioresources Engineering.
    • (2009) Environmental Impact of Livestock Mortalities Burial
    • Pratt, D.L.1
  • 52
    • 84872572595 scopus 로고    scopus 로고
    • Leachate movement beneath two carcass burial sites
    • East Lansing, Mich.: Michigan State University, Department of Animal Science
    • Pratt, D. L., and T. A. Fonstad. 2012. Leachate movement beneath two carcass burial sites. In Proc. 4th Intl. Symposium on Animal By-Products. East Lansing, Mich.: Michigan State University, Department of Animal Science.
    • (2012) Proc. 4th Intl. Symposium on Animal By-Products
    • Pratt, D.L.1    Fonstad, T.A.2
  • 54
    • 33846553147 scopus 로고    scopus 로고
    • Characterisation of microorganisms responsible for EBPR in a sequencing batch reactor by using the 16S rDNA-DGGE method
    • Ren, Y., C. Wei, and K. Xiao. 2007. Characterisation of microorganisms responsible for EBPR in a sequencing batch reactor by using the 16S rDNA-DGGE method. Water SA 33(1): 123-128. (Pubitemid 46154931)
    • (2007) Water SA , vol.33 , Issue.1 , pp. 123-128
    • Ren, Y.1    Wei, C.2    Xiao, K.3
  • 55
    • 79953019181 scopus 로고    scopus 로고
    • Visualization and direct counting of individual denitrifying bacterial cells in soil by nirK-targeted direct in situ PCR
    • Ryuda, N., T. Hashimoto, D. Ueno, K. Inoue, and T. Someya. 2011. Visualization and direct counting of individual denitrifying bacterial cells in soil by nirK-targeted direct in situ PCR. Microbes and Environ. 26(1): 74-80.
    • (2011) Microbes and Environ. , vol.26 , Issue.1 , pp. 74-80
    • Ryuda, N.1    Hashimoto, T.2    Ueno, D.3    Inoue, K.4    Someya, T.5
  • 56
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N., and M. Nei. 1987. The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biol. and Evolution 4(4): 406-425.
    • (1987) Molecular Biol. and Evolution , vol.4 , Issue.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 57
    • 0141590419 scopus 로고    scopus 로고
    • Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts
    • DOI 10.2323/jgam.49.155
    • Sawada, H., L. D. Kuykendall, and J. M. Young. 2003. Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts. J. Gen. and Appl. Microbiol. 49(3): 155-179. (Pubitemid 37160911)
    • (2003) Journal of General and Applied Microbiology , vol.49 , Issue.3 , pp. 155-179
    • Sawada, H.1    Kuykendall, L.D.2    Young, J.M.3
  • 62
    • 33344464667 scopus 로고
    • Measurement of diversity
    • Simpson, E. H. 1949. Measurement of diversity. Nature 163(4148): 688.
    • (1949) Nature , vol.163 , Issue.4148 , pp. 688
    • Simpson, E.H.1
  • 64
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • DOI 10.1093/molbev/msm092
    • Tamura, K., J. Dudley, M. Nei, and S. Kumar. 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biol. and Evolution 24(8): 1596-1599. (Pubitemid 47236692)
    • (2007) Molecular Biology and Evolution , vol.24 , Issue.8 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 65
    • 77957801148 scopus 로고    scopus 로고
    • Denitrification of groundwater with pyrite and Thiobacillus denitrificans
    • Torrentó, C., J. Cama, J. Urmeneta, N. Otero, and A. Soler. 2010. Denitrification of groundwater with pyrite and Thiobacillus denitrificans. Chem. Geol. 278(1-2): 80-91.
    • (2010) Chem. Geol. , vol.278 , Issue.1-2 , pp. 80-91
    • Torrentó, C.1    Cama, J.2    Urmeneta, J.3    Otero, N.4    Soler, A.5
  • 66
    • 54549098701 scopus 로고    scopus 로고
    • Pore water chemistry of a Paleogene continental mudrock in Spain and a Jurassic marine mudrock in Switzerland: Sampling methods and geochemical interpretation
    • Turrero, M. J. 2006. Pore water chemistry of a Paleogene continental mudrock in Spain and a Jurassic marine mudrock in Switzerland: Sampling methods and geochemical interpretation. J. Iberian Geology 32(2): 233-258.
    • (2006) J. Iberian Geology , vol.32 , Issue.2 , pp. 233-258
    • Turrero, M.J.1
  • 67
    • 34548293679 scopus 로고    scopus 로고
    • Naïve Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
    • DOI 10.1128/AEM.00062-07
    • Wang, Q., G. M. Garrity, J. M. Tiedje, and J. R. Cole. 2007. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Applied and Environ. Microbiol. 73(16): 5261-5267. (Pubitemid 47326658)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.16 , pp. 5261-5267
    • Wang, Q.1    Garrity, G.M.2    Tiedje, J.M.3    Cole, J.R.4
  • 68
    • 33644862875 scopus 로고    scopus 로고
    • Anaerobic nitratedependent iron(II) bio-oxidation by a novel lithoautotrophic betaproteobacterium, strain 2002
    • Weber, K. A., J. Pollock, K. A. Cole, S. M. O'Connor, L. A. Achenbach, and J. D. Coates. 2006. Anaerobic nitratedependent iron(II) bio-oxidation by a novel lithoautotrophic betaproteobacterium, strain 2002. Appl. Environ. Microbiol. 72(1): 686-694.
    • (2006) Appl. Environ. Microbiol. , vol.72 , Issue.1 , pp. 686-694
    • Weber, K.A.1    Pollock, J.2    Cole, K.A.3    O'Connor, S.M.4    Achenbach, L.A.5    Coates, J.D.6
  • 70
    • 33749537045 scopus 로고    scopus 로고
    • The taxonomy of rhizobia: An overview
    • DOI 10.1007/s11104-006-9058-7
    • Willems, A. 2006. The taxonomy of rhizobia: An overview. Plant and Soil 287(1-2): 3-14. (Pubitemid 44526807)
    • (2006) Plant and Soil , vol.287 , Issue.1-2 , pp. 3-14
    • Willems, A.1
  • 72
    • 0020286856 scopus 로고
    • Survival and viability of nonculturable Escherichia coli and Vibrio cholerae in the estuarine and marine environment
    • Xu, H. S., N. Roberts, F. L. Singleton, R. W. Attwell, D. J. Grimes, and R. R. Colwell. 1982. Survival and viability of nonculturable Escherichia coli and Vibrio cholerae in the estuarine and marine environment. Microbial Ecol. 8(4): 313-323. (Pubitemid 13105941)
    • (1982) Microbial Ecology , vol.8 , Issue.4 , pp. 313-323
    • Xu, H.S.1    Roberts, N.2    Singleton, F.L.3
  • 73
    • 68849120354 scopus 로고    scopus 로고
    • Use of quantitative and conventional PCR to assess biodegradation of bovine and plant DNA during cattle mortality composting
    • Xu, W., T. Reuter, Y. Xu, T. W. Alexander, B. Gilroyed, L. Jin, K. Stanford, F. J. Larney, and T. A. McAllister. 2009. Use of quantitative and conventional PCR to assess biodegradation of bovine and plant DNA during cattle mortality composting. Environ. Sci. and Tech. 43(16): 6248-6255.
    • (2009) Environ. Sci. and Tech. , vol.43 , Issue.16 , pp. 6248-6255
    • Xu, W.1    Reuter, T.2    Xu, Y.3    Alexander, T.W.4    Gilroyed, B.5    Jin, L.6    Stanford, K.7    Larney, F.J.8    McAllister, T.A.9
  • 74
    • 1342304268 scopus 로고    scopus 로고
    • Characterization of Nitrous Oxide Reductase from a Methylotrophic Denitritrying Bacterium, Hyphomicrobium, denitrificans A3151
    • DOI 10.1093/jb/mvg211
    • Yamaguchi, K., A. Kawamura, H. Ogawa, and S. Suzuki. 2003. Characterization of nitrous oxide reductase from a methylotrophic denitritrying bacterium, Hyphomicrobium denitrificans A3151. J. Biochem. 134(6): 853-858. (Pubitemid 38248360)
    • (2003) Journal of Biochemistry , vol.134 , Issue.6 , pp. 853-858
    • Yamaguchi, K.1    Kawamura, A.2    Ogawa, H.3    Suzuki, S.4
  • 76
    • 0042812120 scopus 로고    scopus 로고
    • Gemmatimonas aurantiaca gen. nov., sp. nov., a Gram-negative, aerobic, polyphosphate-accumulating micro-organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov
    • DOI 10.1099/ijs.0.02520-0
    • Zhang, H., Y. Sekiguchi, S. Hanada, P. Hugenholtz, H. Kim, Y. Kamagata, and K. Nakamura. 2003. Gemmatimonas aurantiaca gen. nov., sp. nov., a Gram-negative, aerobic, polyphosphate-accumulating micro-organism, the first cultured representative of the new bacterial phylum Gemmatimonadetes phyl. nov. Intl. J. Syst. Evol. Microbiol. 53(4): 1155-1163. (Pubitemid 36896531)
    • (2003) International Journal of Systematic and Evolutionary Microbiology , vol.53 , Issue.4 , pp. 1155-1163
    • Zhang, H.1    Sekiguchi, Y.2    Hanada, S.3    Hugenholtz, P.4    Kim, H.5    Kamagata, Y.6    Nakamura, K.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.