-
1
-
-
58149200943
-
The Carbohydrate-Active EnZymes database (CAZy): An expert resource for Glycogenomics
-
Cantarel, B. L., Coutinho, P. M., Rancurel, C., Bernard, T., Lombard, V., and Henrissat, B. (2009) The Carbohydrate-Active EnZymes database (CAZy): An expert resource for Glycogenomics Nucleic Acids Res. 37, D233-D238
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Cantarel, B.L.1
Coutinho, P.M.2
Rancurel, C.3
Bernard, T.4
Lombard, V.5
Henrissat, B.6
-
2
-
-
0030540967
-
Molecular mimicry of host structures by bacterial lipopolysaccharides and its contribution to disease
-
Moran, A. P., Prendergast, M. M., and Appelmelk, B. J. (1996) Molecular mimicry of host structures by bacterial lipopolysaccharides and its contribution to disease FEMS Immunol. Med. Microbiol. 16, 105-115
-
(1996)
FEMS Immunol. Med. Microbiol.
, vol.16
, pp. 105-115
-
-
Moran, A.P.1
Prendergast, M.M.2
Appelmelk, B.J.3
-
3
-
-
0037161293
-
Mechanistic studies of a retaining α-galactosyltransferase from Neisseria meningitidis
-
Ly, H. D., Lougheed, B., Wakarchuk, W. W., and Withers, S. G. (2002) Mechanistic studies of a retaining α-galactosyltransferase from Neisseria meningitidis Biochemistry 41, 5075-5085
-
(2002)
Biochemistry
, vol.41
, pp. 5075-5085
-
-
Ly, H.D.1
Lougheed, B.2
Wakarchuk, W.W.3
Withers, S.G.4
-
4
-
-
0035151023
-
Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs
-
Persson, K., Ly, H. D., Dieckelmann, M., Wakarchuk, W. W., Withers, S. G., and Strynadka, N. C. (2001) Crystal structure of the retaining galactosyltransferase LgtC from Neisseria meningitidis in complex with donor and acceptor sugar analogs Nat. Struct. Biol. 8, 166-175
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 166-175
-
-
Persson, K.1
Ly, H.D.2
Dieckelmann, M.3
Wakarchuk, W.W.4
Withers, S.G.5
Strynadka, N.C.6
-
5
-
-
1542268953
-
Molecular dynamics simulations of glycosyltransferase LgtC
-
Snajdrova, L., Kulhanek, P., Imberty, A., and Koca, J. (2004) Molecular dynamics simulations of glycosyltransferase LgtC Carbohydr. Res. 339, 995-1006
-
(2004)
Carbohydr. Res.
, vol.339
, pp. 995-1006
-
-
Snajdrova, L.1
Kulhanek, P.2
Imberty, A.3
Koca, J.4
-
6
-
-
0742288006
-
Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog
-
Chiu, C. P., Watts, A. G., Lairson, L. L., Gilbert, M., Lim, D., Wakarchuk, W. W., Withers, S. G., and Strynadka, N. C. (2004) Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog Nat. Struct. Mol. Biol. 11, 163-170
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 163-170
-
-
Chiu, C.P.1
Watts, A.G.2
Lairson, L.L.3
Gilbert, M.4
Lim, D.5
Wakarchuk, W.W.6
Withers, S.G.7
Strynadka, N.C.8
-
7
-
-
34250829050
-
Structural analysis of the α-2,3-sialyltransferase Cst-I from Campylobacter jejuni in apo and substrate-analogue bound forms
-
Chiu, C. P., Lairson, L. L., Gilbert, M., Wakarchuk, W. W., Withers, S. G., and Strynadka, N. C. (2007) Structural analysis of the α-2,3- sialyltransferase Cst-I from Campylobacter jejuni in apo and substrate-analogue bound forms Biochemistry 46, 7196-7204
-
(2007)
Biochemistry
, vol.46
, pp. 7196-7204
-
-
Chiu, C.P.1
Lairson, L.L.2
Gilbert, M.3
Wakarchuk, W.W.4
Withers, S.G.5
Strynadka, N.C.6
-
8
-
-
84867492272
-
-
Ph.D. Thesis, Department of Chemistry, The University of British Columbia, Vancouver, BC.
-
Lougheed, B. (1998) Neisseria meningitidis lipopolysaccharide galactosyl transferase: Mechanistc investigations and applications for oligosaccharide synthesis. Ph.D. Thesis, Department of Chemistry, The University of British Columbia, Vancouver, BC.
-
(1998)
Neisseria Meningitidis Lipopolysaccharide Galactosyl Transferase: Mechanistc Investigations and Applications for Oligosaccharide Synthesis
-
-
Lougheed, B.1
-
9
-
-
0033621487
-
Glycosyl fluorides can function as substrates for nucleotide phosphosugar-dependent glycosyltransferases
-
Lougheed, B., Ly, H. D., Wakarchuk, W. W., and Withers, S. G. (1999) Glycosyl fluorides can function as substrates for nucleotide phosphosugar-dependent glycosyltransferases J. Biol. Chem. 274, 37717-37722
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 37717-37722
-
-
Lougheed, B.1
Ly, H.D.2
Wakarchuk, W.W.3
Withers, S.G.4
-
10
-
-
3142615417
-
Intermediate trapping on a mutant retaining α-galactosyltransferase identifies an unexpected aspartate residue
-
Lairson, L. L., Chiu, C. P., Ly, H. D., He, S., Wakarchuk, W. W., Strynadka, N. C., and Withers, S. G. (2004) Intermediate trapping on a mutant retaining α-galactosyltransferase identifies an unexpected aspartate residue J. Biol. Chem. 279, 28339-28344
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 28339-28344
-
-
Lairson, L.L.1
Chiu, C.P.2
Ly, H.D.3
He, S.4
Wakarchuk, W.W.5
Strynadka, N.C.6
Withers, S.G.7
-
11
-
-
49449087287
-
Glycosyltransferases: Structures, functions, and mechanisms
-
Lairson, L. L., Henrissat, B., Davies, G. J., and Withers, S. G. (2008) Glycosyltransferases: Structures, functions, and mechanisms Annu. Rev. Biochem. 77, 521-555
-
(2008)
Annu. Rev. Biochem.
, vol.77
, pp. 521-555
-
-
Lairson, L.L.1
Henrissat, B.2
Davies, G.J.3
Withers, S.G.4
-
12
-
-
1542268957
-
Molecular modeling insights into the catalytic mechanism of the retaining galactosyltransferase LgtC
-
Tvaroska, I. (2004) Molecular modeling insights into the catalytic mechanism of the retaining galactosyltransferase LgtC Carbohydr. Res. 339, 1007-1014
-
(2004)
Carbohydr. Res.
, vol.339
, pp. 1007-1014
-
-
Tvaroska, I.1
-
13
-
-
80855133537
-
The molecular mechanism of enzymatic glycosyl transfer with retention of configuration: Evidence for a short-lived oxocarbenium-like species
-
Ardevol, A. and Rovira, C. (2011) The molecular mechanism of enzymatic glycosyl transfer with retention of configuration: Evidence for a short-lived oxocarbenium-like species Angew. Chem., Int. Ed. 50, 10897-10901
-
(2011)
Angew. Chem., Int. Ed.
, vol.50
, pp. 10897-10901
-
-
Ardevol, A.1
Rovira, C.2
-
14
-
-
84858218497
-
Retaining glycosyltransferase mechanism studied by QM/MM method: LgtC transfers α-galactose via an oxocarbenium ion-like transition state
-
Gómez, H., Polyak, I., Thiel, W., Lluch, J. M., and Masgrau, L. (2012) Retaining glycosyltransferase mechanism studied by QM/MM method: LgtC transfers α-galactose via an oxocarbenium ion-like transition state J. Am. Chem. Soc. 134, 4743-4752
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 4743-4752
-
-
Gómez, H.1
Polyak, I.2
Thiel, W.3
Lluch, J.M.4
Masgrau, L.5
-
16
-
-
84867518091
-
NMR spectral assignments of α-galactosyltransferase LgtC from Neisseria meningitidis: Substrate binding and multiple conformational states
-
Chan, P. H. W., Weissbach, S., Okon, M., Withers, S. G., and McIntosh, L. P. (2012) NMR spectral assignments of α-galactosyltransferase LgtC from Neisseria meningitidis: Substrate binding and multiple conformational states Biochemistry 51, 8278-8292
-
(2012)
Biochemistry
, vol.51
, pp. 8278-8292
-
-
Chan, P.H.W.1
Weissbach, S.2
Okon, M.3
Withers, S.G.4
McIntosh, L.P.5
-
17
-
-
79958837339
-
An introduction to NMR-based approaches for measuring protein dynamics
-
Kleckner, I. R. and Foster, M. P. (2011) An introduction to NMR-based approaches for measuring protein dynamics Biochim. Biophys. Acta 1814, 942-968
-
(2011)
Biochim. Biophys. Acta
, vol.1814
, pp. 942-968
-
-
Kleckner, I.R.1
Foster, M.P.2
-
18
-
-
0242407224
-
Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods
-
Tugarinov, V. and Kay, L. E. (2003) Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods J. Am. Chem. Soc. 125, 13868-13878
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 13868-13878
-
-
Tugarinov, V.1
Kay, L.E.2
-
19
-
-
34547687784
-
Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy
-
Tugarinov, V., Kanelis, V., and Kay, L. E. (2006) Isotope labeling strategies for the study of high-molecular-weight proteins by solution NMR spectroscopy Nat. Protoc. 1, 749-754
-
(2006)
Nat. Protoc.
, vol.1
, pp. 749-754
-
-
Tugarinov, V.1
Kanelis, V.2
Kay, L.E.3
-
20
-
-
33846809165
-
19F-amino acid into proteins as an NMR probe for characterizing protein structure and reactivity
-
19F-amino acid into proteins as an NMR probe for characterizing protein structure and reactivity J. Am. Chem. Soc. 129, 1160-1166
-
(2007)
J. Am. Chem. Soc.
, vol.129
, pp. 1160-1166
-
-
Jackson, J.C.1
Hammill, J.T.2
Mehl, R.A.3
-
21
-
-
47749109536
-
In vivo incorporation of unnatural amino acids to probe structure, dynamics, and ligand binding in a large protein by nuclear magnetic resonance spectroscopy
-
Cellitti, S. E., Jones, D. H., Lagpacan, L., Hao, X., Zhang, Q., Hu, H., Brittain, S. M., Brinker, A., Caldwell, J., Bursulaya, B., Spraggon, G., Brock, A., Ryu, Y., Uno, T., Schultz, P. G., and Geierstanger, B. H. (2008) In vivo incorporation of unnatural amino acids to probe structure, dynamics, and ligand binding in a large protein by nuclear magnetic resonance spectroscopy J. Am. Chem. Soc. 130, 9268-9281
-
(2008)
J. Am. Chem. Soc.
, vol.130
, pp. 9268-9281
-
-
Cellitti, S.E.1
Jones, D.H.2
Lagpacan, L.3
Hao, X.4
Zhang, Q.5
Hu, H.6
Brittain, S.M.7
Brinker, A.8
Caldwell, J.9
Bursulaya, B.10
Spraggon, G.11
Brock, A.12
Ryu, Y.13
Uno, T.14
Schultz, P.G.15
Geierstanger, B.H.16
-
22
-
-
0029400480
-
NMRPipe: A multidimensional spectral processing system based on UNIX pipes
-
Delaglio, F., Grzesiek, S., Vuister, G. W., Zhu, G., Pfeifer, J., and Bax, A. (1995) NMRPipe: A multidimensional spectral processing system based on UNIX pipes J. Biomol. NMR 6, 277-293
-
(1995)
J. Biomol. NMR
, vol.6
, pp. 277-293
-
-
Delaglio, F.1
Grzesiek, S.2
Vuister, G.W.3
Zhu, G.4
Pfeifer, J.5
Bax, A.6
-
23
-
-
0004040543
-
-
University of California, San Francisco, CA.
-
Goddard, T. D. and Kneeler, D. G. (1999) Sparky 3, University of California, San Francisco, CA.
-
(1999)
Sparky 3
-
-
Goddard, T.D.1
Kneeler, D.G.2
-
24
-
-
28044440088
-
Quantitative NMR spectroscopy of supramolecular complexes: Dynamic side pores in ClpP are important for product release
-
Sprangers, R., Gribun, A., Hwang, P. M., Houry, W. A., and Kay, L. E. (2005) Quantitative NMR spectroscopy of supramolecular complexes: Dynamic side pores in ClpP are important for product release Proc. Natl. Acad. Sci. U.S.A. 102, 16678-16683
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 16678-16683
-
-
Sprangers, R.1
Gribun, A.2
Hwang, P.M.3
Houry, W.A.4
Kay, L.E.5
-
25
-
-
34548304719
-
Solution NMR of supramolecular complexes: Providing new insights into function
-
Sprangers, R., Velyvis, A., and Kay, L. E. (2007) Solution NMR of supramolecular complexes: Providing new insights into function Nat. Methods 4, 697-703
-
(2007)
Nat. Methods
, vol.4
, pp. 697-703
-
-
Sprangers, R.1
Velyvis, A.2
Kay, L.E.3
-
27
-
-
1642416319
-
Probing slow dynamics in high molecular weight proteins by methyl-TROSY NMR spectroscopy: Application to a 723-residue enzyme
-
Korzhnev, D. M., Kloiber, K., Kanelis, V., Tugarinov, V., and Kay, L. E. (2004) Probing slow dynamics in high molecular weight proteins by methyl-TROSY NMR spectroscopy: Application to a 723-residue enzyme J. Am. Chem. Soc. 126, 3964-3973
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 3964-3973
-
-
Korzhnev, D.M.1
Kloiber, K.2
Kanelis, V.3
Tugarinov, V.4
Kay, L.E.5
-
28
-
-
84856520247
-
GUARDD: User-friendly MATLAB software for rigorous analysis of CPMG RD NMR data
-
Kleckner, I. R. and Foster, M. P. (2012) GUARDD: User-friendly MATLAB software for rigorous analysis of CPMG RD NMR data J. Biomol. NMR 52, 11-22
-
(2012)
J. Biomol. NMR
, vol.52
, pp. 11-22
-
-
Kleckner, I.R.1
Foster, M.P.2
-
29
-
-
77953643054
-
Adding new chemistries to the genetic code
-
Liu, C. C. and Schultz, P. G. (2010) Adding new chemistries to the genetic code Annu. Rev. Biochem. 79, 413-444
-
(2010)
Annu. Rev. Biochem.
, vol.79
, pp. 413-444
-
-
Liu, C.C.1
Schultz, P.G.2
-
30
-
-
77649180964
-
Site-specific labeling of proteins with NMR-active unnatural amino acids
-
Jones, D. H., Cellitti, S. E., Hao, X., Zhang, Q., Jahnz, M., Summerer, D., Schultz, P. G., Uno, T., and Geierstanger, B. H. (2010) Site-specific labeling of proteins with NMR-active unnatural amino acids J. Biomol. NMR 46, 89-100
-
(2010)
J. Biomol. NMR
, vol.46
, pp. 89-100
-
-
Jones, D.H.1
Cellitti, S.E.2
Hao, X.3
Zhang, Q.4
Jahnz, M.5
Summerer, D.6
Schultz, P.G.7
Uno, T.8
Geierstanger, B.H.9
-
31
-
-
70350348011
-
NMR spectroscopy brings invisible protein states into focus
-
Baldwin, A. J. and Kay, L. E. (2009) NMR spectroscopy brings invisible protein states into focus Nat. Chem. Biol. 5, 808-814
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 808-814
-
-
Baldwin, A.J.1
Kay, L.E.2
-
32
-
-
0034021175
-
Analysis of the dynamic properties of Bacillus circulans xylanase upon formation of a covalent glycosyl-enzyme intermediate
-
Connelly, G. P., Withers, S. G., and McIntosh, L. P. (2000) Analysis of the dynamic properties of Bacillus circulans xylanase upon formation of a covalent glycosyl-enzyme intermediate Protein Sci. 9, 512-524
-
(2000)
Protein Sci.
, vol.9
, pp. 512-524
-
-
Connelly, G.P.1
Withers, S.G.2
McIntosh, L.P.3
-
33
-
-
33847058858
-
NMR spectroscopic characterization of a β-(1,4)-glycosidase along its reaction pathway: Stabilization upon formation of the glycosyl-enzyme intermediate
-
Poon, D. K., Ludwiczek, M. L., Schubert, M., Kwan, E. M., Withers, S. G., and McIntosh, L. P. (2007) NMR spectroscopic characterization of a β-(1,4)-glycosidase along its reaction pathway: Stabilization upon formation of the glycosyl-enzyme intermediate Biochemistry 46, 1759-1770
-
(2007)
Biochemistry
, vol.46
, pp. 1759-1770
-
-
Poon, D.K.1
Ludwiczek, M.L.2
Schubert, M.3
Kwan, E.M.4
Withers, S.G.5
McIntosh, L.P.6
|