-
1
-
-
0033963533
-
Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise
-
Johnson JR, Stell AL (2000) Extended virulence genotypes of Escherichia coli strains from patients with urosepsis in relation to phylogeny and host compromise. J Infect Dis 181: 261-272.
-
(2000)
J Infect Dis
, vol.181
, pp. 261-272
-
-
Johnson, J.R.1
Stell, A.L.2
-
2
-
-
0033775633
-
Rapid and simple determination of the Escherichia coli phylogenetic group
-
Clermont O, Bonacorsi S, Bingen E (2000) Rapid and simple determination of the Escherichia coli phylogenetic group. Appl Environ Microbiol 66: 4555-4558.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 4555-4558
-
-
Clermont, O.1
Bonacorsi, S.2
Bingen, E.3
-
3
-
-
79958183354
-
Phylogenetic groups, virulence genes and quinolone resistance of integron-bearing Escherichia coli strains isolated from a wastewater treatment plant
-
Mokracka J, Koczura R, Jabłońska L, Kaznowski A (2011) Phylogenetic groups, virulence genes and quinolone resistance of integron-bearing Escherichia coli strains isolated from a wastewater treatment plant. Antonie van Leeuwenhoek 99: 817-824.
-
(2011)
Antonie Van Leeuwenhoek
, vol.99
, pp. 817-824
-
-
Mokracka, J.1
Koczura, R.2
Jabłońska, L.3
Kaznowski, A.4
-
4
-
-
84855955932
-
Antibiotic resistance, phylogenetic grouping and virulence potential of Escherichia coli isolated from the faeces of intensively farmed and free range poultry
-
Obeng AS, Rickard H, Ndi O, Sexton M, Barton M (2012) Antibiotic resistance, phylogenetic grouping and virulence potential of Escherichia coli isolated from the faeces of intensively farmed and free range poultry. Vet Microbiol 154: 305-315.
-
(2012)
Vet Microbiol
, vol.154
, pp. 305-315
-
-
Obeng, A.S.1
Rickard, H.2
Ndi, O.3
Sexton, M.4
Barton, M.5
-
5
-
-
2442667673
-
A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli
-
Escobar-Páramo P, Clermont O, Blanc-Potard AB, Bui H, Le Bouguénec C, Denamur E (2004) A specific genetic background is required for acquisition and expression of virulence factors in Escherichia coli. Mol Biol Evol 21: 1085-1094.
-
(2004)
Mol Biol Evol
, vol.21
, pp. 1085-1094
-
-
Escobar-Páramo, P.1
Clermont, O.2
Blanc-Potard, A.B.3
Bui, H.4
Le Bouguénec, C.5
Denamur, E.6
-
6
-
-
67249148436
-
Escherichia coli phylogenetic groups are associated with site of infection and level of antibiotic resistance in community-acquired bacteraemia: a 10 year population-based study in Denmark
-
Bukh AS, Schønheyder HC, Emmersen JMG, Søgaard M, Bastholm S, Roslev P (2009) Escherichia coli phylogenetic groups are associated with site of infection and level of antibiotic resistance in community-acquired bacteraemia: a 10 year population-based study in Denmark. J Antimicrob Chemother 64: 163-168.
-
(2009)
J Antimicrob Chemother
, vol.64
, pp. 163-168
-
-
Bukh, A.S.1
Schønheyder, H.C.2
Emmersen, J.M.G.3
Søgaard, M.4
Bastholm, S.5
Roslev, P.6
-
7
-
-
0034964915
-
Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations
-
Duriez P, Clermont O, Bonacorsi S, Bingen E, Chaventre A, Elion J, Picard B, Denamur E (2001) Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations. Microbiology 147: 1671-1676.
-
(2001)
Microbiology
, vol.147
, pp. 1671-1676
-
-
Duriez, P.1
Clermont, O.2
Bonacorsi, S.3
Bingen, E.4
Chaventre, A.5
Elion, J.6
Picard, B.7
Denamur, E.8
-
8
-
-
33846457919
-
Occurrence of virulence and antimicrobial resistance genes in Escherichia coli isolates from different aquatic ecosystems within the St. Clair River and Detroit River areas
-
Hamelin K, Bruant G, El-Shaarawi A, Hill S, Edge TA, Fairbrother J, Harel J, Maynard C, Masson L, Brousseau R (2007) Occurrence of virulence and antimicrobial resistance genes in Escherichia coli isolates from different aquatic ecosystems within the St. Clair River and Detroit River areas. Appl Environ Microbiol 73: 477-484.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 477-484
-
-
Hamelin, K.1
Bruant, G.2
El-Shaarawi, A.3
Hill, S.4
Edge, T.A.5
Fairbrother, J.6
Harel, J.7
Maynard, C.8
Masson, L.9
Brousseau, R.10
-
9
-
-
34247514740
-
Isolation of potentially pathogenic Escherichia coli O157:H7 from the Ganges River
-
Hamner S, Broadaway SC, Mishra VB, Tripathi A, Mishra RK, Pulcini E, Pyle BH, Ford TE (2007) Isolation of potentially pathogenic Escherichia coli O157: H7 from the Ganges River. Appl Environ Microbiol 73: 2369-2372.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 2369-2372
-
-
Hamner, S.1
Broadaway, S.C.2
Mishra, V.B.3
Tripathi, A.4
Mishra, R.K.5
Pulcini, E.6
Pyle, B.H.7
Ford, T.E.8
-
10
-
-
0034814672
-
Bacterial indicators and metal ions in high mountain lake waters
-
Savvaidis I, Kegos T, Papagiannis C, Voidarou C, Tsiotsias A, Maipa V, Kalfakakou V, Evangelou A, Bezirtzoglou E (2001) Bacterial indicators and metal ions in high mountain lake waters. Microb Ecol Health Dis 13: 147-152.
-
(2001)
Microb Ecol Health Dis
, vol.13
, pp. 147-152
-
-
Savvaidis, I.1
Kegos, T.2
Papagiannis, C.3
Voidarou, C.4
Tsiotsias, A.5
Maipa, V.6
Kalfakakou, V.7
Evangelou, A.8
Bezirtzoglou, E.9
-
11
-
-
33845661479
-
Antibiotic resistance profiles and integrons in Enterobacteriaceae from the riverside of Evros-Ardas with respect to chemical and waste pollution
-
Alexopoulos A, Voidarou C, Stefanis C, Papadopoulos I, Vavias S, Tsiotsias A, Kalkani E, Charvalos E, Bezirtzoglou E (2006) Antibiotic resistance profiles and integrons in Enterobacteriaceae from the riverside of Evros-Ardas with respect to chemical and waste pollution. Microb Ecol Health Dis 18: 170-176.
-
(2006)
Microb Ecol Health Dis
, vol.18
, pp. 170-176
-
-
Alexopoulos, A.1
Voidarou, C.2
Stefanis, C.3
Papadopoulos, I.4
Vavias, S.5
Tsiotsias, A.6
Kalkani, E.7
Charvalos, E.8
Bezirtzoglou, E.9
-
12
-
-
84855534538
-
Antimicrobial resistance of integron-harboring Escherichia coli isolates from clinical samples, wastewater treatment plant and river water
-
Koczura R, Mokracka J, Jabłońska L, Gozdecka E, Kubek M, Kaznowski A (2012) Antimicrobial resistance of integron-harboring Escherichia coli isolates from clinical samples, wastewater treatment plant and river water. Sci Total Environ 414: 680-685.
-
(2012)
Sci Total Environ
, vol.414
, pp. 680-685
-
-
Koczura, R.1
Mokracka, J.2
Jabłońska, L.3
Gozdecka, E.4
Kubek, M.5
Kaznowski, A.6
-
13
-
-
61649118440
-
Occurrence of antibiotic resistance and class 1, 2 and 3 integrons in Escherichia coli isolated from a densely populated estuary (Seine, France)
-
Laroche E, Pawlak B, Berthe T, Skurnik D, Petit F (2009) Occurrence of antibiotic resistance and class 1, 2 and 3 integrons in Escherichia coli isolated from a densely populated estuary (Seine, France). FEMS Microbiol Ecol 68: 118-130.
-
(2009)
FEMS Microbiol Ecol
, vol.68
, pp. 118-130
-
-
Laroche, E.1
Pawlak, B.2
Berthe, T.3
Skurnik, D.4
Petit, F.5
-
14
-
-
33645034091
-
Incidence of class 1 integrons in multiple antibiotic-resistant Gram-negative copiotrophic bacteria from the River Torsa in India
-
Mukherjee S, Chakraborty R (2006) Incidence of class 1 integrons in multiple antibiotic-resistant Gram-negative copiotrophic bacteria from the River Torsa in India. Res Microbiol 157: 220-226.
-
(2006)
Res Microbiol
, vol.157
, pp. 220-226
-
-
Mukherjee, S.1
Chakraborty, R.2
-
15
-
-
65449117606
-
Class 1 and class 2 integrons and plasmid-mediated antibiotic resistance in coliforms isolated from ten rivers in northern Turkey
-
Ozgumus OB, Sandalli C, Sevim A, Celik-Sevim E, Sivri N (2009) Class 1 and class 2 integrons and plasmid-mediated antibiotic resistance in coliforms isolated from ten rivers in northern Turkey. J Microbiol 47: 19-27.
-
(2009)
J Microbiol
, vol.47
, pp. 19-27
-
-
Ozgumus, O.B.1
Sandalli, C.2
Sevim, A.3
Celik-Sevim, E.4
Sivri, N.5
-
17
-
-
45249095383
-
Insights and inferences about integron evolution from genomic data
-
Nemergut DR, Robeson MS, Kysela RF, Martin AP, Schmidt SK, Knight R (2008) Insights and inferences about integron evolution from genomic data. BMC Genomics 9: 261.
-
(2008)
BMC Genomics
, vol.9
, pp. 261
-
-
Nemergut, D.R.1
Robeson, M.S.2
Kysela, R.F.3
Martin, A.P.4
Schmidt, S.K.5
Knight, R.6
-
18
-
-
0037439554
-
Multidrug resistance among Enterobacteriaceae is strongly associated with the presence of integrons and is independent of species or isolate origin
-
Leverstein-van Hall MA, Blok HEM, Rogier A, Donders T, Paauw A, Fluit AC, Verhoef J (2003) Multidrug resistance among Enterobacteriaceae is strongly associated with the presence of integrons and is independent of species or isolate origin. J Infect Dis 187: 251-259.
-
(2003)
J Infect Dis
, vol.187
, pp. 251-259
-
-
Leverstein-van Hall, M.A.1
Blok, H.E.M.2
Rogier, A.3
Donders, T.4
Paauw, A.5
Fluit, A.C.6
Verhoef, J.7
-
19
-
-
79957623880
-
Resistance patterns and integron cassette arrays of Enterobacter cloacae complex strains of human origin
-
Mokracka J, Koczura R, Pawłowski K, Kaznowski A (2011) Resistance patterns and integron cassette arrays of Enterobacter cloacae complex strains of human origin. J Med Microbiol 60: 737-743.
-
(2011)
J Med Microbiol
, vol.60
, pp. 737-743
-
-
Mokracka, J.1
Koczura, R.2
Pawłowski, K.3
Kaznowski, A.4
-
20
-
-
0141501114
-
Phylogenetic origin and virulence genotype in relation to resistance to fluoroquinolones and/or extended-spectrum cephalosporins and cephamycins among Escherichia coli isolates from animals and humans
-
Johnson JR, Kuskowski MA, Owens K, Gajewski A, Winokur PL (2003) Phylogenetic origin and virulence genotype in relation to resistance to fluoroquinolones and/or extended-spectrum cephalosporins and cephamycins among Escherichia coli isolates from animals and humans. J Infect Dis 188: 759-768.
-
(2003)
J Infect Dis
, vol.188
, pp. 759-768
-
-
Johnson, J.R.1
Kuskowski, M.A.2
Owens, K.3
Gajewski, A.4
Winokur, P.L.5
-
21
-
-
77950670049
-
Virulence genes, quinolone and fluoroquinolone resistance, and phylogenetic background of uropathogenic Escherichia coli strains isolated in Japan
-
Kawamura-Sato K, Yoshida R, Shibayama K, Ohta M (2010) Virulence genes, quinolone and fluoroquinolone resistance, and phylogenetic background of uropathogenic Escherichia coli strains isolated in Japan. Jpn J Infect Dis 63: 113-115.
-
(2010)
Jpn J Infect Dis
, vol.63
, pp. 113-115
-
-
Kawamura-Sato, K.1
Yoshida, R.2
Shibayama, K.3
Ohta, M.4
-
22
-
-
79251630809
-
Class 1 integrons, selected virulence genes, and antibiotic resistance in Escherichia coli isolates from the Minjiang River, Fujian Province, Chian
-
Chen B, Zheng W, Yu Y, Huang W, Zheng S, Zhang Y, Guan X, Zhuang Y, Chen N, Topp E (2011) Class 1 integrons, selected virulence genes, and antibiotic resistance in Escherichia coli isolates from the Minjiang River, Fujian Province, Chian. Appl Environ Microbiol 77: 148-155.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 148-155
-
-
Chen, B.1
Zheng, W.2
Yu, Y.3
Huang, W.4
Zheng, S.5
Zhang, Y.6
Guan, X.7
Zhuang, Y.8
Chen, N.9
Topp, E.10
-
23
-
-
22244470459
-
Multiplex PCR for screening of integrons in bacterial lysates
-
Dillon B, Thomas L, Mohmand G, Zelynsky A, Iredell J (2005) Multiplex PCR for screening of integrons in bacterial lysates. J Microbiol Methods 62: 221-232.
-
(2005)
J Microbiol Methods
, vol.62
, pp. 221-232
-
-
Dillon, B.1
Thomas, L.2
Mohmand, G.3
Zelynsky, A.4
Iredell, J.5
-
24
-
-
0026323259
-
Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
-
Versalovic J, Koeuth T, Lupski JR (1991) Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res 19: 6823-6831.
-
(1991)
Nucleic Acids Res
, vol.19
, pp. 6823-6831
-
-
Versalovic, J.1
Koeuth, T.2
Lupski, J.R.3
-
25
-
-
0028837276
-
PCR mapping of integrons reveals several novel combinations of resistance genes
-
Lévesque C, Piché L, Larose C, Roy PH (1995) PCR mapping of integrons reveals several novel combinations of resistance genes. Antimicrob Agents Chemother 39: 185-191.
-
(1995)
Antimicrob Agents Chemother
, vol.39
, pp. 185-191
-
-
Lévesque, C.1
Piché, L.2
Larose, C.3
Roy, P.H.4
-
26
-
-
4644231373
-
Large-scale population structure of human commensal Escherichia coli isolates
-
Escobar-Páramo P, Grenet K, Le Menac'h A, Rode L, Salgado E, Amorin C, Gouriou S, Picard B, Rahimy MC, Andremont A, Denamur E, Ruimy R (2004) Large-scale population structure of human commensal Escherichia coli isolates. Appl Environ Microbiol 70: 5698-5700.
-
(2004)
Appl Environ Microbiol
, vol.70
, pp. 5698-5700
-
-
Escobar-Páramo, P.1
Grenet, K.2
Le Menac'h, A.3
Rode, L.4
Salgado, E.5
Amorin, C.6
Gouriou, S.7
Picard, B.8
Rahimy, M.C.9
Andremont, A.10
Denamur, E.11
Ruimy, R.12
-
27
-
-
10844230042
-
Evaluation of multiplex PCRs for diagnosis of infection with diarrheagenic Escherichia coli and Shigella spp
-
Aranda KRS, Fagundes-Neto U, Scaletsky ICA (2004) Evaluation of multiplex PCRs for diagnosis of infection with diarrheagenic Escherichia coli and Shigella spp. J Clin Microbiol 42: 5849-5853.
-
(2004)
J Clin Microbiol
, vol.42
, pp. 5849-5853
-
-
Aranda, K.R.S.1
Fagundes-Neto, U.2
Scaletsky, I.C.A.3
-
28
-
-
55249107786
-
Novel cassette arrays of integrons in clinical strains of Enterobacteriaceae in China
-
Gu B, Pan S, Wang T, Zhao W, Mei Y, Huang P, Tong M (2008) Novel cassette arrays of integrons in clinical strains of Enterobacteriaceae in China. Int J Antimicrob Agents 32: 529-533.
-
(2008)
Int J Antimicrob Agents
, vol.32
, pp. 529-533
-
-
Gu, B.1
Pan, S.2
Wang, T.3
Zhao, W.4
Mei, Y.5
Huang, P.6
Tong, M.7
-
29
-
-
77949652816
-
Genetic environment of sul genes and characterisation of integrons in Escherichia coli isolates of blood origin in a Spanish hospital
-
Vinué L, Sáenz Y, Rojo-Bezares B, Olarte I, Undabeitia E, Somalo S, Zarazaga M, Torres C (2010) Genetic environment of sul genes and characterisation of integrons in Escherichia coli isolates of blood origin in a Spanish hospital. Int J Antimicrob Agents 35: 492-496.
-
(2010)
Int J Antimicrob Agents
, vol.35
, pp. 492-496
-
-
Vinué, L.1
Sáenz, Y.2
Rojo-Bezares, B.3
Olarte, I.4
Undabeitia, E.5
Somalo, S.6
Zarazaga, M.7
Torres, C.8
-
30
-
-
84861182307
-
Multiresistant Enterobacteriaceae with class 1 and class 2 integrons in a municipal wastewater treatment plant
-
Mokracka J, Koczura R, Kaznowski A (2012) Multiresistant Enterobacteriaceae with class 1 and class 2 integrons in a municipal wastewater treatment plant. Water Res 46: 3353-3363.
-
(2012)
Water Res
, vol.46
, pp. 3353-3363
-
-
Mokracka, J.1
Koczura, R.2
Kaznowski, A.3
-
31
-
-
69949149589
-
Integrons and antibiotic resistance in phylogenetic group B2 Escherichia coli
-
Skurnik D, Lacheeb S, Bernede C, Le Menac HA, Elbaz S, Mohler J, Denamur E, Andremont A, Ruimy R (2009) Integrons and antibiotic resistance in phylogenetic group B2 Escherichia coli. Microb Drug Resist 15: 173-178.
-
(2009)
Microb Drug Resist
, vol.15
, pp. 173-178
-
-
Skurnik, D.1
Lacheeb, S.2
Bernede, C.3
Le Menac, H.A.4
Elbaz, S.5
Mohler, J.6
Denamur, E.7
Andremont, A.8
Ruimy, R.9
-
32
-
-
78751704569
-
Differential patterns of antimicrobial resistance in population subsets of Escherichia coli isolated from waste and surface waters
-
Figueira V, Serra E, Manaia C (2011) Differential patterns of antimicrobial resistance in population subsets of Escherichia coli isolated from waste and surface waters. Sci Total Environ 409: 1017-1023.
-
(2011)
Sci Total Environ
, vol.409
, pp. 1017-1023
-
-
Figueira, V.1
Serra, E.2
Manaia, C.3
-
33
-
-
33646558236
-
Characterization of Shiga toxin gene (stx)-positive and intimin gene (eae)-positive Escherichia coli isolates from wastewater of slaughterhouses in France
-
Loukiadis E, Kérourédan M, Beutin L, Oswald E, Brugère H (2006) Characterization of Shiga toxin gene (stx)-positive and intimin gene (eae)-positive Escherichia coli isolates from wastewater of slaughterhouses in France. Appl Environ Microbiol 72: 3245-3251.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3245-3251
-
-
Loukiadis, E.1
Kérourédan, M.2
Beutin, L.3
Oswald, E.4
Brugère, H.5
-
34
-
-
79952443577
-
The occurrence of Shiga toxin-producing Escherichia coli in bathing water of the Sierra de la Ventana region. Buenos Aires Province, Argentina
-
Marucci PL, Olivera NL, Brugnoni LI, Sica MG, Cubitto AM (2010) The occurrence of Shiga toxin-producing Escherichia coli in bathing water of the Sierra de la Ventana region. Buenos Aires Province, Argentina. Environ Monit Assess 175: 1-8.
-
(2010)
Environ Monit Assess
, vol.175
, pp. 1-8
-
-
Marucci, P.L.1
Olivera, N.L.2
Brugnoni, L.I.3
Sica, M.G.4
Cubitto, A.M.5
-
35
-
-
77952795486
-
Escherichia coli phylogenetic group determination and its application in the identification of the major animal source of fecal contamination
-
Carlos C, Pires MM, Stoppe NC, Hachich EM, Sato MI, Gomes TA, Amaral LA, Ottoboni LM (2010) Escherichia coli phylogenetic group determination and its application in the identification of the major animal source of fecal contamination. BMC Microbiol 10: 161.
-
(2010)
BMC Microbiol
, vol.10
, pp. 161
-
-
Carlos, C.1
Pires, M.M.2
Stoppe, N.C.3
Hachich, E.M.4
Sato, M.I.5
Gomes, T.A.6
Amaral, L.A.7
Ottoboni, L.M.8
-
36
-
-
0042529178
-
The Yersinia high-pathogenicity island and iron-uptake systems in clinical isolates of Escherichia coli
-
Koczura R, Kaznowski A (2003) The Yersinia high-pathogenicity island and iron-uptake systems in clinical isolates of Escherichia coli. J Med Microbiol 52: 637-642.
-
(2003)
J Med Microbiol
, vol.52
, pp. 637-642
-
-
Koczura, R.1
Kaznowski, A.2
-
37
-
-
84862634321
-
Origin and evolution of antibiotic resistance: the common mechanisms of emergence and spread in water bodies
-
Lupo A, Coyne S, Beredonk TA (2012) Origin and evolution of antibiotic resistance: the common mechanisms of emergence and spread in water bodies. Front Microbiol 3: 18.
-
(2012)
Front Microbiol
, vol.3
, pp. 18
-
-
Lupo, A.1
Coyne, S.2
Beredonk, T.A.3
|