-
1
-
-
34547158073
-
Investigation of antibiotic resistance profile and TEM-type β-lactamase gene carriage of ampicillin-resistant Escherichia coli strains isolated from drinking water
-
S. Alpay-Karaoglu O.B. Ozgumus E. Sevim F. Kolayli A. Sevim P. Yesilgil 2007 Investigation of antibiotic resistance profile and TEM-type β-lactamase gene carriage of ampicillin-resistant Escherichia coli strains isolated from drinking water Ann. Microbiol. 57 281 288
-
(2007)
Ann. Microbiol.
, vol.57
, pp. 281-288
-
-
Alpay-Karaoglu, S.1
Ozgumus, O.B.2
Sevim, E.3
Kolayli, F.4
Sevim, A.5
Yesilgil, P.6
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
DOI 10.1093/nar/25.17.3389
-
S.F. Altschul T.L. Madden A.A. Schäffer J. Zhang Z. Zhang W. Miller D.J. Lipman 1997 Gapped BLAST and PSI-BLAST: a new generation of protein database search programs Nucleic Acids Res. 25 3389 3402 (Pubitemid 27359211)
-
(1997)
Nucleic Acids Research
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0028353909
-
Distribution of tetracycline resistance determinants among gram-negative bacteria isolated from polluted and unpolluted marine sediments
-
S.R. Andersen R.A. Sanda 1994 Distribution of tetracycline resistance among gram-negative bacteria isolated from polluted and unpolluted marine sediments Appl. Environ. Microbiol. 60 908 912 (Pubitemid 24077980)
-
(1994)
Applied and Environmental Microbiology
, vol.60
, Issue.3
, pp. 908-912
-
-
Andersen, S.R.1
Sandaa, R.-A.2
-
4
-
-
0036315407
-
Antibiotic resistance of gram-negative bacteria in rivers, United States
-
R.J. Ash B. Mauck M. Morgan 2002 Antibiotic resistance of gram-negative bacteria in rivers, United States Emerg. Infect. Dis. 8 713 716
-
(2002)
Emerg. Infect. Dis.
, vol.8
, pp. 713-716
-
-
Ash, R.J.1
Mauck, B.2
Morgan, M.3
-
5
-
-
0003855149
-
-
2nd ed. John Willey & Sons New York, N.Y., USA
-
nd ed., John Willey & Sons, New York, N.Y., USA.
-
(1995)
Short Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brient, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
6
-
-
0003425384
-
-
AWWA-American Water Works Association. 20th ed. American Public Health Association, American Water Works Association and Water Environment Federation Washington, D.C., USA
-
th ed. American Public Health Association, American Water Works Association and Water Environment Federation, Washington, D.C., USA.
-
(1998)
Standard Methods for the Examination of Water and Wastewater
-
-
-
7
-
-
4344637030
-
The role of aquatic ecosystems as reservoirs of antibiotic resistant bacteria and antibiotic resistance genes
-
P.T. Biyela J. Lin C.C. Bezuidenhout 2004 The role of aquatic ecosystems as reservoirs of antibiotic resistant bacteria and antibiotic resistance genes Water Sci. Technol. 50 45 50 (Pubitemid 39139953)
-
(2004)
Water Science and Technology
, vol.50
, Issue.1
, pp. 45-50
-
-
Biyela, P.T.1
Lin, J.2
Bezuidenhout, C.C.3
-
8
-
-
0000257772
-
Facultatively anaerobic gram-negative rods
-
Williams & Wilkins Baltimore, USA
-
Brenner, D.J. 1986. Facultatively anaerobic gram-negative rods, p. 408-516. In N.R. Krieg and J.G. Holt (eds.), Bergey's Manual of Systematic Bacteriology, Vol. 1. Williams & Wilkins, Baltimore, USA.
-
(1986)
Bergey's Manual of Systematic Bacteriology, Vol. 1
, pp. 408-516
-
-
Brenner, D.J.1
Krieg, N.R.2
Holt, J.G.3
-
9
-
-
0034948532
-
Importance of integrons in the diffusion of resistance
-
A. Carattoli 2001 Importance of integrons in the diffusion of resistance Vet. Res. 32 243 259 (Pubitemid 32595208)
-
(2001)
Veterinary Research
, vol.32
, Issue.3-4
, pp. 243-259
-
-
Carattoli, A.1
-
11
-
-
34447563633
-
Increased incidence of class 1 integrons in trimethoprim/ sulfamethoxazole-resistant clinical isolates of Stenotrophomonas maltophila
-
L.L. Chang H.H. Lin C.Y. Chang P.L. Lu 2007 Increased incidence of class 1 integrons in trimethoprim/sulfamethoxazole-resistant clinical isolates of Stenotrophomonas maltophila J. Antimicrob. Chemother. 59 1038 1045
-
(2007)
J. Antimicrob. Chemother.
, vol.59
, pp. 1038-1045
-
-
Chang, L.L.1
Lin, H.H.2
Chang, C.Y.3
Lu, P.L.4
-
14
-
-
0023339489
-
Estimating worldwide current antibiotic usage: Report of task force i
-
N.F. Col R.W. O'Connor 1987 Estimating worldwide current antibiotic usage: Report of task force I Rev. Infect. Dis. 9 S232 243
-
(1987)
Rev. Infect. Dis.
, vol.9
, pp. 232-243
-
-
Col, N.F.1
O'Connor, R.W.2
-
15
-
-
1942472949
-
Resistance integrons and super-integrons
-
DOI 10.1111/j.1198-743X.2004.00858.x
-
A.C. Fluit F.J. Schmitz 2004 Resistance integrons and super-integrons Clin. Microbiol. Infect. 10 272 288 (Pubitemid 38519353)
-
(2004)
Clinical Microbiology and Infection
, vol.10
, Issue.4
, pp. 272-288
-
-
Fluit, A.C.1
Schmitz, F.-J.2
-
16
-
-
0025651190
-
The Tn21 subgroup of bacterial transposable elements
-
J. Grinsted F. De La Cruz R. Schmitt 1990 The Tn21 subgroup of bacterial transposable elements Plasmid 24 163 189
-
(1990)
Plasmid
, vol.24
, pp. 163-189
-
-
Grinsted, J.1
De La Cruz, F.2
Schmitt, R.3
-
17
-
-
0028962716
-
Mobile gene cassettes and integrons: Capture and spread of genes by site-specific recombination
-
R.M. Hall C.M. Collis 1995 Mobile gene cassettes and integrons: capture and spread of genes by site-specific recombination Mol. Microbiol. 15 593 600
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 593-600
-
-
Hall, R.M.1
Collis, C.M.2
-
18
-
-
0027130853
-
Integrons: Novel DNA elements which capture genes by site-specific recombination
-
R.M. Hall H.W. Stokes 1993 Integrons: novel DNA elements which capture genes by site-specific recombination Genetica 90 115 132 (Pubitemid 2032213)
-
(1993)
Genetica
, vol.90
, Issue.2-3
, pp. 115-132
-
-
Hall, R.M.1
Stokes, H.W.2
-
20
-
-
52049112343
-
Phenotyping and genotyping of antibiotic-resistant Escherichia coli isolated from a natural river basin
-
J. Hu J. Shi H. Chang D. Li M. Yang Y. Kamagata 2008 Phenotyping and genotyping of antibiotic-resistant Escherichia coli isolated from a natural river basin Environ. Sci. Technol. 42 3415 3420
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 3415-3420
-
-
Hu, J.1
Shi, J.2
Chang, H.3
Li, D.4
Yang, M.5
Kamagata, Y.6
-
21
-
-
0022992067
-
Antibiotic resistant bacteria in Windermere and two remote upland tarns in the English Lake District
-
J.G. Jones S. Gardener B.M. Simon R.W. Pickup 1986 Antibiotic resistant bacteria in Windermere and two remote upland tarns in the English Lake district J. Appl. Bacteriol. 60 443 453 (Pubitemid 17190533)
-
(1986)
Journal of Applied Bacteriology
, vol.60
, Issue.5
, pp. 443-453
-
-
Jones ., G.1
Gardener, S.2
Simon, B.M.3
Pickup, R.W.4
-
22
-
-
0019433725
-
Rapid procedure for detection and isolation of large and small plasmids
-
C.I. Kado S.T. Liu 1981 Rapid procedure for detection and isolation of large and small plasmids J. Bacteriol. 145 1365 1373 (Pubitemid 11097357)
-
(1981)
Journal of Bacteriology
, vol.145
, Issue.3
, pp. 1365-1373
-
-
Kado, C.I.1
Liu, S.-T.2
-
23
-
-
35348848541
-
Chronological study of antibiotic resistances and their relevant genes in Korean avian pathogenic Escherichia coli isolates
-
DOI 10.1128/JCM.01922-06
-
T.E. Kim Y.W. Jeong S.H. Cho S.J. Kim H.J. Kwon 2007 Chronological study of antibiotic resistances and their relevant genes in Korean avian pathogenic Escherichia coli isolates J. Clin. Microbiol. 45 3309 3315 (Pubitemid 47585656)
-
(2007)
Journal of Clinical Microbiology
, vol.45
, Issue.10
, pp. 3309-3315
-
-
Kim, T.-E.1
Jeong, Y.-W.2
Cho, S.-H.3
Kim, S.-J.4
Kwon, H.-J.5
-
24
-
-
33846463419
-
Prevalence and antimicrobial resistance patterns of Aeromonas strains isolated from drinking water samples in Istanbul, Turkey
-
DOI 10.1159/000098248
-
F. Koksal N. Oguzkurt M. Samasti K. Altas 2007 Prevalence and antimicrobial resistance patterns of Aeromonas strains isolated from drinking water samples in Istanbul, Turkey Chemotherapy 53 30 35 (Pubitemid 46143851)
-
(2007)
Chemotherapy
, vol.53
, Issue.1
, pp. 30-35
-
-
Koksal, F.1
Oguzkurt, N.2
Samasti, M.3
Altas, K.4
-
25
-
-
0036642409
-
Evidence of extensive interspecies transfer of integron-mediated antimicrobial resistance genes among multidrug-resistant Enterobacteriaceae in a clinical setting
-
M.A. Leverstein-van Hall A.T.A. Box H.E.M. Blok A. Paauw A.C. Fluit J. Verhoef 2001 Evidence of extensive interspecies transfer of integron-mediated antimicrobial resistance genes among multidrug-resistant Enterobacteriaceae in a clinical setting J. Infect. Dis. 186 49 56
-
(2001)
J. Infect. Dis.
, vol.186
, pp. 49-56
-
-
Leverstein-Van Hall, M.A.1
Box, A.T.A.2
Blok, H.E.M.3
Paauw, A.4
Fluit, A.C.5
Verhoef, J.6
-
27
-
-
0017980782
-
A multiple plasmid containing Escherichia coli strain: Convention source of size reference plasmid molecules
-
F.L. Macrina D.J. Kopecko K.R. Jones D.J. Ayers S.M. tmp McCowen 1978 A multiple plasmid containing Escherichia coli strain: convention source of size reference plasmid molecules Plasmid 1 417 420
-
(1978)
Plasmid
, vol.1
, pp. 417-420
-
-
MacRina, F.L.1
Kopecko, D.J.2
Jones, K.R.3
Ayers, D.J.4
Tmp M. M, S.5
-
28
-
-
33645034091
-
Incidence of class 1 integrons in multiple antibiotic-resistant Gram-negative copiotrophic bacteria from the River Torsa in India
-
S. Mukherjee R. Chakraborty 2006 Incidence of class 1 integrons in multiple antibiotic-resistant Gram-negative copiotrophic bacteria from the River Torsa in India Res. Microbiol. 157 220 226
-
(2006)
Res. Microbiol.
, vol.157
, pp. 220-226
-
-
Mukherjee, S.1
Chakraborty, R.2
-
29
-
-
38449098882
-
Conjugation potential and class 1 integron carriage of resident plasmids in river water capiotrophs
-
S. Mukherjee R. Chakraborty 2007 Conjugation potential and class 1 integron carriage of resident plasmids in river water capiotrophs Acta Microbiol. Immunol. Hung. 54 379 397
-
(2007)
Acta Microbiol. Immunol. Hung.
, vol.54
, pp. 379-397
-
-
Mukherjee, S.1
Chakraborty, R.2
-
30
-
-
24644466428
-
Emergence of plasmid-mediated resistance to quinolones in Enterobacteriaceae
-
DOI 10.1093/jac/dki245
-
P. Nordmann L. Poirel 2005 Emergence of plasmid-mediated resistance to quinolones in Enterobacteriaceae J. Antimicrob. Chemother. 56 463 469 (Pubitemid 41264121)
-
(2005)
Journal of Antimicrobial Chemotherapy
, vol.56
, Issue.3
, pp. 463-469
-
-
Nordmann, P.1
Poirel, L.2
-
31
-
-
35648964766
-
Molecular characterization of antibiotic resistant Escherichia coli strains isolated from tap and spring waters in a coastal region in Turkey
-
O.B. Ozgumus E. Celik-Sevim S. Alpay-Karaoglu C. Sandalli A. Sevim 2007 Molecular characterization of antibiotic resistant Escherichia coli strains isolated from tap and spring waters in a coastal region in Turkey J. Microbiol. 45 379 387 (Pubitemid 350023371)
-
(2007)
Journal of Microbiology
, vol.45
, Issue.5
, pp. 379-387
-
-
Ozgumus, O.B.1
Celik-Sevim, E.2
Alpay-Karaoglu, S.3
Sandalli, C.4
Sevim, A.5
-
32
-
-
39849105349
-
Prevalence of bacterial contamination with antibiotic-resistant and enterotoxigenic fecal coliforms in treated drinking water
-
S.P. Pathak K. Gopak 2008 Prevalence of bacterial contamination with antibiotic-resistant and enterotoxigenic fecal coliforms in treated drinking water J. Toxicol. Environ. Health A 71 427 433
-
(2008)
J. Toxicol. Environ. Health A
, vol.71
, pp. 427-433
-
-
Pathak, S.P.1
Gopak, K.2
-
33
-
-
0033987149
-
Class i integrons containing a dhfrI trimethoprim resistance gene cassette in aquatic Acinetobacter spp.
-
DOI 10.1016/S0378-1097(99)00563-7, PII S0378109799005637
-
A. Petersen L. Guardabassi A. Dalsgaard J.E. Olsen 2000 Class 1 integrons containing a dhfrI trimethoprim resistance gene cassette in aquatic Acinetobacter spp FEMS Microbiol. Lett. 182 73 76 (Pubitemid 30001568)
-
(2000)
FEMS Microbiology Letters
, vol.182
, Issue.1
, pp. 73-76
-
-
Petersen, A.1
Guardabassi, L.2
Dalsgaard, A.3
Olsen, J.E.4
-
35
-
-
0029567996
-
Gene cassettes: A new class of mobile element
-
G.D. Recchia R.M. Hall 1995 Gene cassettes: a new class of mobile element Microbiology 141 3015 3027 (Pubitemid 26011340)
-
(1995)
Microbiology
, vol.141
, Issue.12
, pp. 3015-3027
-
-
Recchia, G.D.1
Hall, R.M.2
-
36
-
-
0025087292
-
Outbreak of ceftazidime resistance caused by extended-spectrum -lactamases at a Massachusetts chronic-care facility
-
L.B. Rice S.H. Willey G.A. Papanicolaou A.A. Medeiros G.M. Eliopoulos R.C. Moellering G.A. Jacoby 1990 Outbreak of ceftazidime resistance caused by extended-spectrum β-lactamases at a Massachusetts chronic care facility Antimicrob. Agents Chemother. 34 2193 2199 (Pubitemid 20373856)
-
(1990)
Antimicrobial Agents and Chemotherapy
, vol.34
, Issue.11
, pp. 2193-2199
-
-
Rice, L.B.1
Willey, S.H.2
Papanicolaou, G.A.3
Medeiros, A.A.4
Eliopoulos, G.M.5
Moellering Jr., R.C.6
Jacoby, G.A.7
-
37
-
-
0037710463
-
Antimicrobial resistance markers of class 1 and class 2 integron-bearing Escherichia coli from irrigation water and sediments
-
M.T. Roe E. Vega S.D. Pillai 2003 Antimicrobial resistance markers of class 1 and class 2 integron bearing Escherichia coli from irrigation water and sediments Emerg. Infect. Dis. 9 822 826 (Pubitemid 36801582)
-
(2003)
Emerging Infectious Diseases
, vol.9
, Issue.7
, pp. 822-826
-
-
Roe, M.T.1
Vega, E.2
Pillai, S.D.3
-
38
-
-
0003627813
-
-
Applied Biostatistics New York, N.Y., USA
-
Rohlf, F.J. 1990. NTSYS-pc numerical taxonomy and multivariate analysis system, p. 1-145. Version 1.8, Applied Biostatistics, New York, N.Y., USA.
-
(1990)
NTSYS-pc Numerical Taxonomy and Multivariate Analysis System
, pp. 1-145
-
-
Rohlf, F.J.1
-
39
-
-
0035992371
-
The role of integrons in antibiotic resistance gene capture
-
D.A. Rowe-Magnus D. Mazel 2002 The role of integrons in antibiotic resistance gene capture Int. J. Med. Microbiol. 292 115 125
-
(2002)
Int. J. Med. Microbiol.
, vol.292
, pp. 115-125
-
-
Rowe-Magnus, D.A.1
Mazel, D.2
-
40
-
-
0346625821
-
Horizontal transfer of genes in bacteria
-
P.H. Roy 1999 Horizontal transfer of genes in bacteria Microbiol. Today 26 168 170
-
(1999)
Microbiol. Today
, vol.26
, pp. 168-170
-
-
Roy, P.H.1
-
41
-
-
0042529200
-
Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli isolates to identify nonpoint fecal sources
-
DOI 10.1128/AEM.69.8.4942-4950.2003
-
S. Seurinck W. Verstraete S.D. Siciliano 2003 Use of 16S-23S rRNA intergenic spacer region PCR and repetitive extragenic palindromic PCR analyses of Escherichia coli isolates to identify nonpoint fecal sources Appl. Environ. Microbiol. 69 4942 4950 (Pubitemid 36992960)
-
(2003)
Applied and Environmental Microbiology
, vol.69
, Issue.8
, pp. 4942-4950
-
-
Seurinck, S.1
Verstraete, W.2
Siciliano, S.D.3
-
42
-
-
33748092031
-
Characterization of antimicrobial resistance and class 1 and 2 integrons in Salmonella enterica isolates from different sources in Portugal
-
DOI 10.1093/jac/dkl242
-
A.A. Shehabi J.B. Odeh M. Fayyad 2006 Characterization of antimicrobial resistance and class 1 integron found in Escherichia coli isolates from human stools and drinking water sources in Jordan J. Chemother. 18 468 472 (Pubitemid 44294938)
-
(2006)
Journal of Antimicrobial Chemotherapy
, vol.58
, Issue.2
, pp. 297-304
-
-
Antunes, P.1
MacHado, J.2
Peixe, L.3
-
44
-
-
33645902870
-
Origin of Class 1 and 2 integrons and gene cassettes in a population-based sample of uropathogenic Escherichia coli
-
O.D. Solberg R.M. Ajiboye L.W. Riley 2006 Origin of Class 1 and 2 integrons and gene cassettes in a population-based sample of uropathogenic Escherichia coli J. Clin. Microbiol. 44 1347 1351
-
(2006)
J. Clin. Microbiol.
, vol.44
, pp. 1347-1351
-
-
Solberg, O.D.1
Ajiboye, R.M.2
Riley, L.W.3
-
45
-
-
29444436826
-
Prevalence and characterization of class 1 and class 2 integrons in Escherichia coli isolated from meat and meat products of Norwegian origin
-
DOI 10.1093/jac/dki377
-
M. Sunde 2005 Prevalence and characterization of class 1 and class 2 integrons in Escherichia coli isolated from meat and meat products of Norwegian origin J. Antimicrob. Chemother. 56 1019 1024 (Pubitemid 43009814)
-
(2005)
Journal of Antimicrobial Chemotherapy
, vol.56
, Issue.6
, pp. 1019-1024
-
-
Sunde, M.1
-
46
-
-
26444458825
-
Antibiotic resistance in Gram negative bacteria isolated from Aksu River in (Kahramanmaras) Turkey
-
S. Toroglu S. Dincer H. Korkmaz 2005 Antibiotic resistance in Gram-negative bacteria isolated from Aksu River in (Kahramanmaras) Turkey Ann. Microbiol. 55 229 233 (Pubitemid 41426798)
-
(2005)
Annals of Microbiology
, vol.55
, Issue.3
, pp. 229-233
-
-
Toroglu, S.1
Dincer, S.2
Korkmaz, H.3
-
47
-
-
34250018642
-
Occurrence and characteristics of class 1, 2 and 3 integrons in Escherichia coli, Salmonella and Campylobacter spp. in the Netherlands
-
DOI 10.1093/jac/dkl549
-
A. Van Essen-Zandbergen H. Smith K. Veldman D. Mevius 2007 Occurrence and characteristics of class 1, 2 and 3 integrons in Escherichia coli, Salmonella and Campylobacter spp. in the Netherlands J. Antimicrob. Chemother. 59 746 750 (Pubitemid 47073411)
-
(2007)
Journal of Antimicrobial Chemotherapy
, vol.59
, Issue.4
, pp. 746-750
-
-
Van Essen-Zandbergen, A.1
Smith, H.2
Veldman, K.3
Mevius, D.4
-
49
-
-
34247477606
-
Novel method for rapid assessment of antibiotic resistance in Escherichia coli isolates from environmental waters by use of a modified chromogenic agar
-
DOI 10.1128/AEM.02099-06
-
A.J. Watkinson G.R. Micalizzi J.R. Bates S.D. Costanzo 2007 Novel method for rapid assessment of antibiotic resistance in Escherichia coli isolates from environmental waters by use modified chromogenic agar Appl. Environ. Microbiol. 73 2224 2229 (Pubitemid 46649513)
-
(2007)
Applied and Environmental Microbiology
, vol.73
, Issue.7
, pp. 2224-2229
-
-
Watkinson, A.J.1
Micalizzi, G.R.2
Bates, J.R.3
Costanzo, S.D.4
-
50
-
-
0034863970
-
Integrons and gene cassettes in the Enterobacteriaceae
-
DOI 10.1128/AAC.45.9.2658-2661.2001
-
P.A. White C.J. tmp McIver W.D. Rawlinson 2001 Integrons and gene cassettes in the Enterobacteriaceae Antimicrob. Agents Chemother. 45 2658 6261 (Pubitemid 32801929)
-
(2001)
Antimicrobial Agents and Chemotherapy
, vol.45
, Issue.9
, pp. 2658-2661
-
-
White, P.A.1
McIver, C.J.2
Rawlinson, W.D.3
|