메뉴 건너뛰기




Volumn 8, Issue 12, 2012, Pages

Systematic Identification of Rhythmic Genes Reveals camk1gb as a New Element in the Circadian Clockwork

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL EXPERIMENT; ANIMAL TISSUE; ARTICLE; CALCIUM CALMODULIN DEPENDENT PROTEIN KINASE IGB GENE; CIRCADIAN RHYTHM; CONTROLLED STUDY; DNA MICROARRAY; EMBRYO; GENE; GENE EXPRESSION; GENE FUNCTION; GENE IDENTIFICATION; GENETIC ANALYSIS; LOCOMOTION; NONHUMAN; NUCLEOTIDE SEQUENCE; PINEAL BODY; RNA SEQUENCE; ZEBRA FISH;

EID: 84872038509     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003116     Document Type: Article
Times cited : (38)

References (72)
  • 1
    • 0037118077 scopus 로고    scopus 로고
    • Circadian rhythms from flies to human
    • Panda S, Hogenesch JB, Kay SA, (2002) Circadian rhythms from flies to human. Nature 417: 329-335.
    • (2002) Nature , vol.417 , pp. 329-335
    • Panda, S.1    Hogenesch, J.B.2    Kay, S.A.3
  • 2
    • 33749031807 scopus 로고    scopus 로고
    • Molecular components of the mammalian circadian clock
    • Ko CH, Takahashi JS, (2006) Molecular components of the mammalian circadian clock. Hum Mol Genet 15: R271-277.
    • (2006) Hum Mol Genet , vol.15
    • Ko, C.H.1    Takahashi, J.S.2
  • 3
    • 84860264490 scopus 로고    scopus 로고
    • Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β
    • Cho H, Zhao X, Hatori M, Yu RT, Barish GD, et al. (2012) Regulation of circadian behaviour and metabolism by REV-ERB-α and REV-ERB-β. Nature 485: 123-127.
    • (2012) Nature , vol.485 , pp. 123-127
    • Cho, H.1    Zhao, X.2    Hatori, M.3    Yu, R.T.4    Barish, G.D.5
  • 4
    • 84860291442 scopus 로고    scopus 로고
    • Regulation of circadian behaviour and metabolism by synthetic REV-ERB agonists
    • Solt LA, Wang Y, Banerjee S, Hughes T, Kojetin DJ, et al. (2012) Regulation of circadian behaviour and metabolism by synthetic REV-ERB agonists. Nature 485: 62-68.
    • (2012) Nature , vol.485 , pp. 62-68
    • Solt, L.A.1    Wang, Y.2    Banerjee, S.3    Hughes, T.4    Kojetin, D.J.5
  • 5
    • 33745329809 scopus 로고    scopus 로고
    • The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification
    • Gachon F, Olela FF, Schaad O, Descombes P, Schibler U, (2006) The circadian PAR-domain basic leucine zipper transcription factors DBP, TEF, and HLF modulate basal and inducible xenobiotic detoxification. Cell Metabolism 4: 25-36.
    • (2006) Cell Metabolism , vol.4 , pp. 25-36
    • Gachon, F.1    Olela, F.F.2    Schaad, O.3    Descombes, P.4    Schibler, U.5
  • 6
    • 0030021710 scopus 로고    scopus 로고
    • Circadian regulation of melatonin production in cultured zebrafish pineal and retina
    • Cahill GM, (1996) Circadian regulation of melatonin production in cultured zebrafish pineal and retina. Brain Res 708: 177-181.
    • (1996) Brain Res , vol.708 , pp. 177-181
    • Cahill, G.M.1
  • 7
    • 65449158440 scopus 로고    scopus 로고
    • Structural and functional evolution of the pineal melatonin system in vertebrates
    • Falcón J, Besseau L, Fuentès M, Sauzet S, Magnanou E, et al. (2009) Structural and functional evolution of the pineal melatonin system in vertebrates. Ann N Y Acad Sci 1163: 101-111.
    • (2009) Ann N Y Acad Sci , vol.1163 , pp. 101-111
    • Falcón, J.1    Besseau, L.2    Fuentès, M.3    Sauzet, S.4    Magnanou, E.5
  • 8
    • 70449524303 scopus 로고    scopus 로고
    • Pineal projections in the zebrafish (Danio rerio): overlap with retinal and cerebellar projections
    • Yáñez J, Busch J, Anadón R, Meissl H, (2009) Pineal projections in the zebrafish (Danio rerio): overlap with retinal and cerebellar projections. Neuroscience 164: 1712-1720.
    • (2009) Neuroscience , vol.164 , pp. 1712-1720
    • Yáñez, J.1    Busch, J.2    Anadón, R.3    Meissl, H.4
  • 9
    • 84946825893 scopus 로고    scopus 로고
    • Pineal photoreception and temporal physiology in fish
    • In: Kulczykowska E, Popek W, Kapoor B, editors
    • Ekström P, Meissl H (2010) Pineal photoreception and temporal physiology in fish. In: Kulczykowska E, Popek W, Kapoor B, editors. Biological clock in fish. Science Publishers. pp. 35-70.
    • (2010) Biological clock in fish. Science Publishers , pp. 35-70
    • Ekström, P.1    Meissl, H.2
  • 10
    • 79955909193 scopus 로고    scopus 로고
    • It's time to swim! Zebrafish and the circadian clock
    • Vatine G, Vallone D, Gothilf Y, Foulkes NS, (2011) It's time to swim! Zebrafish and the circadian clock. FEBS Letters 585: 1485-1494.
    • (2011) FEBS Letters , vol.585 , pp. 1485-1494
    • Vatine, G.1    Vallone, D.2    Gothilf, Y.3    Foulkes, N.S.4
  • 11
    • 33645233954 scopus 로고    scopus 로고
    • Circadian time-keeping during early stages of development
    • Ziv L, Gothilf Y, (2006) Circadian time-keeping during early stages of development. Proc Natl Acad Sci USA 103: 4146-4151.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 4146-4151
    • Ziv, L.1    Gothilf, Y.2
  • 12
    • 70350518303 scopus 로고    scopus 로고
    • Light directs zebrafish period2 expression via conserved D and E boxes
    • doi:10.1371/journal.pbio.1000223
    • Vatine G, Vallone D, Appelbaum L, Mracek P, Ben-Moshe Z, et al. (2009) Light directs zebrafish period2 expression via conserved D and E boxes. PLoS Biol 7: e1000223 doi: 10.1371/journal.pbio.1000223.
    • (2009) PLoS Biol , vol.7
    • Vatine, G.1    Vallone, D.2    Appelbaum, L.3    Mracek, P.4    Ben-Moshe, Z.5
  • 13
    • 0036337918 scopus 로고    scopus 로고
    • Otx5 regulates genes that show circadian expression in the zebrafish pineal complex
    • Gamse JT, Shen YC, Thisse C, Thisse B, Raymond PA, et al. (2001) Otx5 regulates genes that show circadian expression in the zebrafish pineal complex. Nature Genetics 30: 117-121.
    • (2001) Nature Genetics , vol.30 , pp. 117-121
    • Gamse, J.T.1    Shen, Y.C.2    Thisse, C.3    Thisse, B.4    Raymond, P.A.5
  • 14
    • 0141557951 scopus 로고    scopus 로고
    • DNA microarray analyses of circadian timing: the genomic basis of biological time
    • Duffield GE, (2003) DNA microarray analyses of circadian timing: the genomic basis of biological time. Journal of Neuroendocrinology 15: 991-1002.
    • (2003) Journal of Neuroendocrinology , vol.15 , pp. 991-1002
    • Duffield, G.E.1
  • 15
    • 0142056949 scopus 로고    scopus 로고
    • Transcriptional profiling of the chick pineal gland, a photoreceptive circadian oscillator and pacemaker
    • Bailey MJ, Beremand PD, Hammer R, Bell-Pedersen D, Thomas TL, et al. (2003) Transcriptional profiling of the chick pineal gland, a photoreceptive circadian oscillator and pacemaker. Mol Endocrinol 17: 2084-2095.
    • (2003) Mol Endocrinol , vol.17 , pp. 2084-2095
    • Bailey, M.J.1    Beremand, P.D.2    Hammer, R.3    Bell-Pedersen, D.4    Thomas, T.L.5
  • 16
    • 65549145079 scopus 로고    scopus 로고
    • Night/day changes in pineal expression of >600 genes: central role of adrenergic/cAMP signaling
    • Bailey MJ, Coon SL, Carter DA, Humphries A, Kim JS, et al. (2009) Night/day changes in pineal expression of >600 genes: central role of adrenergic/cAMP signaling. J Biol Chem 284: 7606-7622.
    • (2009) J Biol Chem , vol.284 , pp. 7606-7622
    • Bailey, M.J.1    Coon, S.L.2    Carter, D.A.3    Humphries, A.4    Kim, J.S.5
  • 17
    • 67649624678 scopus 로고    scopus 로고
    • Transcriptome analysis of the zebrafish pineal gland
    • Toyama R, Chen X, Jhawar N, Aamar E, Epstein J, et al. (2009) Transcriptome analysis of the zebrafish pineal gland. Dev Dyn 238: 1813-1826.
    • (2009) Dev Dyn , vol.238 , pp. 1813-1826
    • Toyama, R.1    Chen, X.2    Jhawar, N.3    Aamar, E.4    Epstein, J.5
  • 18
    • 36949004698 scopus 로고    scopus 로고
    • Meta-analysis of drosophila circadian microarray studies identifies a novel set of rhythmically expressed genes
    • doi:10.1371/journal.pcbi.0030208
    • Keegan KP, Pradhan S, Wang JP, Allada R, (2007) Meta-analysis of drosophila circadian microarray studies identifies a novel set of rhythmically expressed genes. PLoS Comput Biol 3: e208 doi:10.1371/journal.pcbi.0030208.
    • (2007) PLoS Comput Biol , vol.3
    • Keegan, K.P.1    Pradhan, S.2    Wang, J.P.3    Allada, R.4
  • 20
    • 31444431754 scopus 로고    scopus 로고
    • Reliability and reproducibility issues in DNA microarray measurements
    • Draghici S, Khatri P, Eklund AC, Szallasi Z, (2006) Reliability and reproducibility issues in DNA microarray measurements. Trends in Genetics 22: 101-109.
    • (2006) Trends in Genetics , vol.22 , pp. 101-109
    • Draghici, S.1    Khatri, P.2    Eklund, A.C.3    Szallasi, Z.4
  • 21
    • 50649089207 scopus 로고    scopus 로고
    • RNA-Seq: an assessment of technical reproducibility and comparison with gene expression arrays
    • Marioni JC, Mason CE, Mane SM, Stephens M, Gilad Y, (2008) RNA-Seq: an assessment of technical reproducibility and comparison with gene expression arrays. Genome Res 18: 1509-1517.
    • (2008) Genome Res , vol.18 , pp. 1509-1517
    • Marioni, J.C.1    Mason, C.E.2    Mane, S.M.3    Stephens, M.4    Gilad, Y.5
  • 22
    • 84860231981 scopus 로고    scopus 로고
    • RNA studies under fire
    • Hayden EC, (2012) RNA studies under fire. Nature 484: 428.
    • (2012) Nature , vol.484 , pp. 428
    • Hayden, E.C.1
  • 23
  • 24
    • 57149085481 scopus 로고    scopus 로고
    • Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms
    • 't Hoen PAC, Ariyurek Y, Thygesen HH, Vreugdenhil E, Vossen RHAM, et al. (2008) Deep sequencing-based expression analysis shows major advances in robustness, resolution and inter-lab portability over five microarray platforms. Nucl Acids Res 36: e141-e141.
    • (2008) Nucl Acids Res , vol.36
    • 't Hoen, P.A.C.1    Ariyurek, Y.2    Thygesen, H.H.3    Vreugdenhil, E.4    Vossen, R.H.A.M.5
  • 25
    • 61449129514 scopus 로고    scopus 로고
    • A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland
    • Alon S, Eisenberg E, Jacob-Hirsch J, Rechavi G, Vatine G, et al. (2009) A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland. Bioinformatics 25: 559-562.
    • (2009) Bioinformatics , vol.25 , pp. 559-562
    • Alon, S.1    Eisenberg, E.2    Jacob-Hirsch, J.3    Rechavi, G.4    Vatine, G.5
  • 26
    • 78651364359 scopus 로고    scopus 로고
    • ZFIN: enhancements and updates to the zebrafish model organism database
    • Bradford Y, Conlin T, Dunn N, Fashena D, Frazer K, et al. (2011) ZFIN: enhancements and updates to the zebrafish model organism database. Nucleic Acids Res 39: D822-829.
    • (2011) Nucleic Acids Res , vol.39
    • Bradford, Y.1    Conlin, T.2    Dunn, N.3    Fashena, D.4    Frazer, K.5
  • 27
    • 19044392845 scopus 로고    scopus 로고
    • Functional development of the zebrafish pineal gland: light-induced expression of period2 is required for onset of the circadian clock
    • Ziv L, Levkovitz S, Toyama R, Falcon J, Gothilf Y, (2005) Functional development of the zebrafish pineal gland: light-induced expression of period2 is required for onset of the circadian clock. Journal of Neuroendocrinology 17: 314-320.
    • (2005) Journal of Neuroendocrinology , vol.17 , pp. 314-320
    • Ziv, L.1    Levkovitz, S.2    Toyama, R.3    Falcon, J.4    Gothilf, Y.5
  • 28
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang DW, Sherman BT, Lempicki RA, (2008) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nature Protocols 4: 44-57.
    • (2008) Nature Protocols , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 29
    • 0033305569 scopus 로고    scopus 로고
    • Zebrafish serotonin N-acetyltransferase-2: marker for development of pineal photoreceptors and circadian clock function
    • Gothilf Y, Coon SL, Toyama R, Chitnis A, Namboodiri MA, et al. (1999) Zebrafish serotonin N-acetyltransferase-2: marker for development of pineal photoreceptors and circadian clock function. Endocrinology 140: 4895-4903.
    • (1999) Endocrinology , vol.140 , pp. 4895-4903
    • Gothilf, Y.1    Coon, S.L.2    Toyama, R.3    Chitnis, A.4    Namboodiri, M.A.5
  • 30
    • 0037705378 scopus 로고    scopus 로고
    • Molecular cloning and characterization of CLICK-III/CaMKIgamma, a novel membrane-anchored neuronal Ca2+/calmodulin-dependent protein kinase (CaMK)
    • Takemoto-Kimura S, Terai H, Takamoto M, Ohmae S, Kikumura S, et al. (2003) Molecular cloning and characterization of CLICK-III/CaMKIgamma, a novel membrane-anchored neuronal Ca2+/calmodulin-dependent protein kinase (CaMK). J Biol Chem 278: 18597-18605.
    • (2003) J Biol Chem , vol.278 , pp. 18597-18605
    • Takemoto-Kimura, S.1    Terai, H.2    Takamoto, M.3    Ohmae, S.4    Kikumura, S.5
  • 31
    • 0037903487 scopus 로고    scopus 로고
    • Cloning, characterization and expression of two alternatively splicing isoforms of Ca2+/calmodulin-dependent protein kinase Iγ in the rat brain
    • Nishimura H, Sakagami H, Uezu A, Fukunaga K, Watanabe M, et al. (2003) Cloning, characterization and expression of two alternatively splicing isoforms of Ca2+/calmodulin-dependent protein kinase Iγ in the rat brain. Journal of Neurochemistry 85: 1216-1227.
    • (2003) Journal of Neurochemistry , vol.85 , pp. 1216-1227
    • Nishimura, H.1    Sakagami, H.2    Uezu, A.3    Fukunaga, K.4    Watanabe, M.5
  • 32
    • 34248582943 scopus 로고    scopus 로고
    • Automated video image analysis of larval zebrafish locomotor rhythms
    • Cahill GM, (2007) Automated video image analysis of larval zebrafish locomotor rhythms. Methods Mol Biol 362: 83-94.
    • (2007) Methods Mol Biol , vol.362 , pp. 83-94
    • Cahill, G.M.1
  • 33
    • 0036676369 scopus 로고    scopus 로고
    • Entraining signals initiate behavioral circadian rhythmicity in larval zebrafish
    • Hurd MW, Cahill GM, (2002) Entraining signals initiate behavioral circadian rhythmicity in larval zebrafish. J Biol Rhythms 17: 307-314.
    • (2002) J Biol Rhythms , vol.17 , pp. 307-314
    • Hurd, M.W.1    Cahill, G.M.2
  • 34
    • 34547766473 scopus 로고    scopus 로고
    • Modulation of locomotor activity in larval zebrafish during light adaptation
    • Burgess HA, Granato M, (2007) Modulation of locomotor activity in larval zebrafish during light adaptation. J Exp Biol 210: 2526-2539.
    • (2007) J Exp Biol , vol.210 , pp. 2526-2539
    • Burgess, H.A.1    Granato, M.2
  • 35
    • 33947510169 scopus 로고    scopus 로고
    • Arylalkylamine N-acetyltransferase: "the Timezyme."
    • Klein DC, (2007) Arylalkylamine N-acetyltransferase: "the Timezyme.". J Biol Chem 282: 4233-4237.
    • (2007) J Biol Chem , vol.282 , pp. 4233-4237
    • Klein, D.C.1
  • 36
    • 0031738168 scopus 로고    scopus 로고
    • Transcripts encoding two melatonin synthesis enzymes in the teleost pineal organ: circadian regulation in pike and zebrafish, but not in trout
    • Bégay V, Falcón J, Cahill GM, Klein DC, Coon SL, (1998) Transcripts encoding two melatonin synthesis enzymes in the teleost pineal organ: circadian regulation in pike and zebrafish, but not in trout. Endocrinology 139: 905-912.
    • (1998) Endocrinology , vol.139 , pp. 905-912
    • Bégay, V.1    Falcón, J.2    Cahill, G.M.3    Klein, D.C.4    Coon, S.L.5
  • 37
    • 47049105571 scopus 로고    scopus 로고
    • Molecular and cellular regulation of pineal organ responses
    • Academic Press
    • Falcón J, Besseau L, Boeuf G (2006) Molecular and cellular regulation of pineal organ responses. Sensory Systems Neuroscience. Academic Press. pp. 243-306.
    • (2006) Sensory Systems Neuroscience , pp. 243-306
    • Falcón, J.1    Besseau, L.2    Boeuf, G.3
  • 38
    • 0035798639 scopus 로고    scopus 로고
    • Identification of a calcium/calmodulin-dependent protein kinase that phosphorylates the Neurospora circadian clock protein FREQUENCY
    • Yang Y, Cheng P, Zhi G, Liu Y, (2001) Identification of a calcium/calmodulin-dependent protein kinase that phosphorylates the Neurospora circadian clock protein FREQUENCY. J Biol Chem 276: 41064-41072.
    • (2001) J Biol Chem , vol.276 , pp. 41064-41072
    • Yang, Y.1    Cheng, P.2    Zhi, G.3    Liu, Y.4
  • 39
    • 33745101711 scopus 로고    scopus 로고
    • Second messenger and Ras/MAPK signalling pathways regulate CLOCK/CYCLE-dependent transcription
    • Weber F, Hung H-C, Maurer C, Kay SA, (2006) Second messenger and Ras/MAPK signalling pathways regulate CLOCK/CYCLE-dependent transcription. J Neurochem 98: 248-257.
    • (2006) J Neurochem , vol.98 , pp. 248-257
    • Weber, F.1    Hung, H.-C.2    Maurer, C.3    Kay, S.A.4
  • 40
    • 1542298186 scopus 로고    scopus 로고
    • Diurnal, circadian and photic regulation of calcium/calmodulin-dependent kinase II and neuronal nitric oxide synthase in the hamster suprachiasmatic nuclei
    • Agostino PV, Ferreyra GA, Murad AD, Watanabe Y, Golombek DA, (2004) Diurnal, circadian and photic regulation of calcium/calmodulin-dependent kinase II and neuronal nitric oxide synthase in the hamster suprachiasmatic nuclei. Neurochem Int 44: 617-625.
    • (2004) Neurochem Int , vol.44 , pp. 617-625
    • Agostino, P.V.1    Ferreyra, G.A.2    Murad, A.D.3    Watanabe, Y.4    Golombek, D.A.5
  • 41
    • 0030610224 scopus 로고    scopus 로고
    • The involvement of calmodulin and Ca2+/calmodulin-dependent protein kinase II in the circadian rhythms controlled by the suprachiasmatic nucleus
    • Fukushima T, Shimazoe T, Shibata S, Watanabe A, Ono M, et al. (1997) The involvement of calmodulin and Ca2+/calmodulin-dependent protein kinase II in the circadian rhythms controlled by the suprachiasmatic nucleus. Neurosci Lett 227: 45-48.
    • (1997) Neurosci Lett , vol.227 , pp. 45-48
    • Fukushima, T.1    Shimazoe, T.2    Shibata, S.3    Watanabe, A.4    Ono, M.5
  • 42
    • 77955983063 scopus 로고    scopus 로고
    • Circadian control of global gene expression patterns
    • Doherty CJ, Kay SA, (2010) Circadian control of global gene expression patterns. Annu Rev Genet 44: 419-444.
    • (2010) Annu Rev Genet , vol.44 , pp. 419-444
    • Doherty, C.J.1    Kay, S.A.2
  • 43
    • 77955883388 scopus 로고    scopus 로고
    • Biases in Illumina transcriptome sequencing caused by random hexamer priming
    • Hansen KD, Brenner SE, Dudoit S, (2010) Biases in Illumina transcriptome sequencing caused by random hexamer priming. Nucl Acids Res 38: e131.
    • (2010) Nucl Acids Res , vol.38
    • Hansen, K.D.1    Brenner, S.E.2    Dudoit, S.3
  • 44
    • 80052990473 scopus 로고    scopus 로고
    • Systematic bias in high-throughput sequencing data and its correction by BEADS
    • Cheung MS, Down TA, Latorre I, Ahringer J, (2011) Systematic bias in high-throughput sequencing data and its correction by BEADS. Nucl Acids Res 39: e103.
    • (2011) Nucl Acids Res , vol.39
    • Cheung, M.S.1    Down, T.A.2    Latorre, I.3    Ahringer, J.4
  • 45
    • 79551632681 scopus 로고    scopus 로고
    • Detection and removal of biases in the analysis of next-generation sequencing reads
    • doi:10.1371/journal.pone.0016685
    • Schwartz S, Oren R, Ast G, (2011) Detection and removal of biases in the analysis of next-generation sequencing reads. PLoS ONE 6: e16685 doi:10.1371/journal.pone.0016685.
    • (2011) PLoS ONE , vol.6
    • Schwartz, S.1    Oren, R.2    Ast, G.3
  • 47
    • 33750708917 scopus 로고    scopus 로고
    • Neurobiology of the sleep-wake cycle: sleep architecture, circadian regulation, and regulatory feedback
    • Fuller PM, Gooley JJ, Saper CB, (2006) Neurobiology of the sleep-wake cycle: sleep architecture, circadian regulation, and regulatory feedback. J Biol Rhythms 21: 482-493.
    • (2006) J Biol Rhythms , vol.21 , pp. 482-493
    • Fuller, P.M.1    Gooley, J.J.2    Saper, C.B.3
  • 48
    • 33745579027 scopus 로고    scopus 로고
    • Sleep in Zebrafish
    • Zhdanova IV, (2006) Sleep in Zebrafish. Zebrafish 3: 215-226.
    • (2006) Zebrafish , vol.3 , pp. 215-226
    • Zhdanova, I.V.1
  • 49
    • 68549123700 scopus 로고    scopus 로고
    • Transient receptor potential canonical 5 channels activate Ca2+/calmodulin kinase Igamma to promote axon formation in hippocampal neurons
    • Davare MA, Fortin DA, Saneyoshi T, Nygaard S, Kaech S, et al. (2009) Transient receptor potential canonical 5 channels activate Ca2+/calmodulin kinase Igamma to promote axon formation in hippocampal neurons. J Neurosci 29: 9794-9808.
    • (2009) J Neurosci , vol.29 , pp. 9794-9808
    • Davare, M.A.1    Fortin, D.A.2    Saneyoshi, T.3    Nygaard, S.4    Kaech, S.5
  • 50
    • 34249711392 scopus 로고    scopus 로고
    • Regulation of dendritogenesis via a lipid-raft-associated Ca2+/calmodulin-dependent protein kinase CLICK-III/CaMKIgamma
    • Takemoto-Kimura S, Ageta-Ishihara N, Nonaka M, Adachi-Morishima A, Mano T, et al. (2007) Regulation of dendritogenesis via a lipid-raft-associated Ca2+/calmodulin-dependent protein kinase CLICK-III/CaMKIgamma. Neuron 54: 755-770.
    • (2007) Neuron , vol.54 , pp. 755-770
    • Takemoto-Kimura, S.1    Ageta-Ishihara, N.2    Nonaka, M.3    Adachi-Morishima, A.4    Mano, T.5
  • 51
    • 33744900895 scopus 로고    scopus 로고
    • Activity-dependent dendritic arborization mediated by CaM-kinase I activation and enhanced CREB-dependent transcription of Wnt-2
    • Wayman GA, Impey S, Marks D, Saneyoshi T, Grant WF, et al. (2006) Activity-dependent dendritic arborization mediated by CaM-kinase I activation and enhanced CREB-dependent transcription of Wnt-2. Neuron 50: 897-909.
    • (2006) Neuron , vol.50 , pp. 897-909
    • Wayman, G.A.1    Impey, S.2    Marks, D.3    Saneyoshi, T.4    Grant, W.F.5
  • 52
    • 0029894818 scopus 로고    scopus 로고
    • Melatonin synthesis: analysis of the more than 150-fold nocturnal increase in serotonin N-acetyltransferase messenger ribonucleic acid in the rat pineal gland
    • Roseboom PH, Coon SL, Baler R, McCune SK, Weller JL, et al. (1996) Melatonin synthesis: analysis of the more than 150-fold nocturnal increase in serotonin N-acetyltransferase messenger ribonucleic acid in the rat pineal gland. Endocrinology 137: 3033-3045.
    • (1996) Endocrinology , vol.137 , pp. 3033-3045
    • Roseboom, P.H.1    Coon, S.L.2    Baler, R.3    McCune, S.K.4    Weller, J.L.5
  • 53
    • 0030903999 scopus 로고    scopus 로고
    • The rat arylalkylamine N-acetyltransferase gene promoter. cAMP activation via a cAMP-responsive element-CCAAT complex
    • Baler R, Covington S, Klein DC, (1997) The rat arylalkylamine N-acetyltransferase gene promoter. cAMP activation via a cAMP-responsive element-CCAAT complex. J Biol Chem 272: 6979-6985.
    • (1997) J Biol Chem , vol.272 , pp. 6979-6985
    • Baler, R.1    Covington, S.2    Klein, D.C.3
  • 54
    • 37249086610 scopus 로고    scopus 로고
    • Rev-erbalpha, a heme sensor that coordinates metabolic and circadian pathways
    • Yin L, Wu N, Curtin JC, Qatanani M, Szwergold NR, et al. (2007) Rev-erbalpha, a heme sensor that coordinates metabolic and circadian pathways. Science 318: 1786-1789.
    • (2007) Science , vol.318 , pp. 1786-1789
    • Yin, L.1    Wu, N.2    Curtin, J.C.3    Qatanani, M.4    Szwergold, N.R.5
  • 55
    • 65549100013 scopus 로고    scopus 로고
    • Cytochrome P450 and the biological clock in mammals
    • Froy O, (2009) Cytochrome P450 and the biological clock in mammals. Curr Drug Metab 10: 104-115.
    • (2009) Curr Drug Metab , vol.10 , pp. 104-115
    • Froy, O.1
  • 56
    • 35648973259 scopus 로고    scopus 로고
    • Circadian control by the reduction/oxidation pathway: catalase represses light-dependent clock gene expression in the zebrafish
    • Hirayama J, Cho S, Sassone-Corsi P, (2007) Circadian control by the reduction/oxidation pathway: catalase represses light-dependent clock gene expression in the zebrafish. Proc Natl Acad Sci USA 104: 15747-15752.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 15747-15752
    • Hirayama, J.1    Cho, S.2    Sassone-Corsi, P.3
  • 57
    • 77951889295 scopus 로고    scopus 로고
    • The mammalian circadian timing system: organization and coordination of central and peripheral clocks
    • Dibner C, Schibler U, Albrecht U, (2010) The mammalian circadian timing system: organization and coordination of central and peripheral clocks. Annu Rev Physiol 72: 517-549.
    • (2010) Annu Rev Physiol , vol.72 , pp. 517-549
    • Dibner, C.1    Schibler, U.2    Albrecht, U.3
  • 58
    • 11144228014 scopus 로고    scopus 로고
    • Isolation and phenogenetics of a novel circadian rhythm mutant in zebrafish
    • DeBruyne J, Hurd MW, Gutiérrez L, Kaneko M, Tan Y, et al. (2004) Isolation and phenogenetics of a novel circadian rhythm mutant in zebrafish. J Neurogenet 18: 403-428.
    • (2004) J Neurogenet , vol.18 , pp. 403-428
    • DeBruyne, J.1    Hurd, M.W.2    Gutiérrez, L.3    Kaneko, M.4    Tan, Y.5
  • 59
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad BM, Irizarry RA, Astrand M, Speed TP, (2003) A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 60
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL, (2009) TopHat: discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 61
    • 77956340995 scopus 로고    scopus 로고
    • Comprehensive comparative analysis of strand-specific RNA sequencing methods
    • Levin JZ, Yassour M, Adiconis X, Nusbaum C, Thompson DA, et al. (2010) Comprehensive comparative analysis of strand-specific RNA sequencing methods. Nat Methods 7: 709-715.
    • (2010) Nat Methods , vol.7 , pp. 709-715
    • Levin, J.Z.1    Yassour, M.2    Adiconis, X.3    Nusbaum, C.4    Thompson, D.A.5
  • 62
    • 0034069495 scopus 로고    scopus 로고
    • Gene ontology: tool for the unification of biology. The Gene Ontology Consortium
    • Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, et al. (2000) Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 25: 25-29.
    • (2000) Nat Genet , vol.25 , pp. 25-29
    • Ashburner, M.1    Ball, C.A.2    Blake, J.A.3    Botstein, D.4    Butler, H.5
  • 63
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: kyoto encyclopedia of genes and genomes
    • Kanehisa M, Goto S, (2000) KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 28: 27-30.
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 64
    • 80053299067 scopus 로고    scopus 로고
    • A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception
    • doi:10.1371/journal.pbio.1001142
    • Cavallari N, Frigato E, Vallone D, Fröhlich N, Lopez-Olmeda JF, et al. (2011) A blind circadian clock in cavefish reveals that opsins mediate peripheral clock photoreception. PLoS Biol 9: e1001142 doi:10.1371/journal.pbio.1001142.
    • (2011) PLoS Biol , vol.9
    • Cavallari, N.1    Frigato, E.2    Vallone, D.3    Fröhlich, N.4    Lopez-Olmeda, J.F.5
  • 66
    • 33750892607 scopus 로고    scopus 로고
    • Molecular analysis of Dec1 and Dec2 in the peripheral circadian clock of zebrafish photosensitive cells
    • Abe T, Ishikawa T, Masuda T, Mizusawa K, Tsukamoto T, et al. (2006) Molecular analysis of Dec1 and Dec2 in the peripheral circadian clock of zebrafish photosensitive cells. Biochem Biophys Res Commun 351: 1072-1077.
    • (2006) Biochem Biophys Res Commun , vol.351 , pp. 1072-1077
    • Abe, T.1    Ishikawa, T.2    Masuda, T.3    Mizusawa, K.4    Tsukamoto, T.5
  • 67
    • 0034636050 scopus 로고    scopus 로고
    • Asynchronous oscillations of two zebrafish CLOCK partners reveal differential clock control and function
    • Cermakian N, Whitmore D, Foulkes NS, Sassone-Corsi P, (2000) Asynchronous oscillations of two zebrafish CLOCK partners reveal differential clock control and function. Proc Natl Acad Sci USA 97: 4339-4344.
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 4339-4344
    • Cermakian, N.1    Whitmore, D.2    Foulkes, N.S.3    Sassone-Corsi, P.4
  • 69
    • 33645542833 scopus 로고    scopus 로고
    • Crossveinless 2 is an essential positive feedback regulator of Bmp signaling during zebrafish gastrulation
    • Rentzsch F, Zhang J, Kramer C, Sebald W, Hammerschmidt M, (2006) Crossveinless 2 is an essential positive feedback regulator of Bmp signaling during zebrafish gastrulation. Development 133: 801-811.
    • (2006) Development , vol.133 , pp. 801-811
    • Rentzsch, F.1    Zhang, J.2    Kramer, C.3    Sebald, W.4    Hammerschmidt, M.5
  • 70
    • 0033834420 scopus 로고    scopus 로고
    • Molecular analysis of zebrafish photolyase/cryptochrome family: two types of cryptochromes present in zebrafish
    • Kobayashi Y, Ishikawa T, Hirayama J, Daiyasu H, Kanai S, et al. (2000) Molecular analysis of zebrafish photolyase/cryptochrome family: two types of cryptochromes present in zebrafish. Genes Cells 5: 725-738.
    • (2000) Genes Cells , vol.5 , pp. 725-738
    • Kobayashi, Y.1    Ishikawa, T.2    Hirayama, J.3    Daiyasu, H.4    Kanai, S.5
  • 71
    • 77956972497 scopus 로고    scopus 로고
    • Multiple PAR and E4BP4 bZIP transcription factors in zebrafish: diverse spatial and temporal expression patterns
    • Ben-Moshe Z, Vatine G, Alon S, Tovin A, Mracek P, et al. (2010) Multiple PAR and E4BP4 bZIP transcription factors in zebrafish: diverse spatial and temporal expression patterns. Chronobiol Int 27: 1509-1531.
    • (2010) Chronobiol Int , vol.27 , pp. 1509-1531
    • Ben-Moshe, Z.1    Vatine, G.2    Alon, S.3    Tovin, A.4    Mracek, P.5
  • 72
    • 84255190045 scopus 로고    scopus 로고
    • Circadian expression of clock and putative clock-controlled genes in skeletal muscle of the zebrafish
    • Amaral IPG, Johnston IA, (2012) Circadian expression of clock and putative clock-controlled genes in skeletal muscle of the zebrafish. Am J Physiol Regul Integr Comp Physiol 302: R193-R206.
    • (2012) Am J Physiol Regul Integr Comp Physiol , vol.302
    • Amaral, I.P.G.1    Johnston, I.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.