메뉴 건너뛰기




Volumn 67, Issue 1, 2013, Pages 80-94

Reconstructing the complex evolutionary origin of wild allopolyploid tobaccos (Nicotiana section Suaveolentes)

Author keywords

Gene tree; Hybridization; Network; Polyploid; Recombination; Reticulate evolution

Indexed keywords

CHROMOSOME; EVOLUTIONARY BIOLOGY; GENETIC ANALYSIS; GENETIC STRUCTURE; GENOME; HYBRIDIZATION; POLYPLOIDY; RECONSTRUCTION; TOBACCO; WILD POPULATION;

EID: 84871993104     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2012.01748.x     Document Type: Article
Times cited : (50)

References (72)
  • 1
    • 4344710831 scopus 로고    scopus 로고
    • Origins, establishment and evolution of two new polyploid species: Senecio cambrensis and S. eboracensis in the British Isles
    • Abbott, R. J., and A. J. Lowe. 2004. Origins, establishment and evolution of two new polyploid species: Senecio cambrensis and S. eboracensis in the British Isles. Biol. J. Linn. Soc. 82:467-474.
    • (2004) Biol. J. Linn. Soc. , vol.82 , pp. 467-474
    • Abbott, R.J.1    Lowe, A.J.2
  • 2
    • 1342309210 scopus 로고    scopus 로고
    • Parallel metropolis-coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
    • Altekar, G., S. Dwarkadas, J. P. Huelsenbeck, and F. Ronquist. 2004. Parallel metropolis-coupled Markov chain Monte Carlo for Bayesian phylogenetic inference. Bioinformatics 20:407-415.
    • (2004) Bioinformatics , vol.20 , pp. 407-415
    • Altekar, G.1    Dwarkadas, S.2    Huelsenbeck, J.P.3    Ronquist, F.4
  • 3
    • 0034049710 scopus 로고    scopus 로고
    • Molecular phylogeny of Nicotiana (Solanaceae) based on the nucleotide sequence of the matK gene
    • Aoki, S., and M. Ito. 2000. Molecular phylogeny of Nicotiana (Solanaceae) based on the nucleotide sequence of the matK gene. Plant. Biol. 2:316-324.
    • (2000) Plant. Biol. , vol.2 , pp. 316-324
    • Aoki, S.1    Ito, M.2
  • 4
    • 0031135337 scopus 로고    scopus 로고
    • Recombinant DNA sequences generated by PCR amplification
    • Bradley, R. D., and D. M. Hillis. 1997. Recombinant DNA sequences generated by PCR amplification. Mol. Biol. Evol. 14:592-593.
    • (1997) Mol. Biol. Evol. , vol.14 , pp. 592-593
    • Bradley, R.D.1    Hillis, D.M.2
  • 5
    • 78049272344 scopus 로고    scopus 로고
    • Origins and introgression of polyploid species in Mentzelia section Trachyphytum (Loasaceae)
    • Brokaw, J. M., and L. Hufford. 2010. Origins and introgression of polyploid species in Mentzelia section Trachyphytum (Loasaceae). Am. J. Bot. 97:1457-1473.
    • (2010) Am. J. Bot. , vol.97 , pp. 1457-1473
    • Brokaw, J.M.1    Hufford, L.2
  • 6
    • 1542347067 scopus 로고    scopus 로고
    • Neighbor-Net: an agglomerative method for the construction of phylogenetic networks
    • Bryant, D., and V. Moulton. 2004. Neighbor-Net: an agglomerative method for the construction of phylogenetic networks. Mol. Biol. Evol. 21:255-265.
    • (2004) Mol. Biol. Evol. , vol.21 , pp. 255-265
    • Bryant, D.1    Moulton, V.2
  • 7
    • 79955409280 scopus 로고    scopus 로고
    • Challenges in polyploid phylogenetic reconstruction: a case story from the Arctic-alpine Cerastium alpinum complex
    • Brysting, A. K., C. Mathiesen, and T. Marcussen. 2011. Challenges in polyploid phylogenetic reconstruction: a case story from the Arctic-alpine Cerastium alpinum complex. Taxon 60:333-347.
    • (2011) Taxon , vol.60 , pp. 333-347
    • Brysting, A.K.1    Mathiesen, C.2    Marcussen, T.3
  • 8
    • 12244309499 scopus 로고    scopus 로고
    • The origin and extinction of species through hybridization
    • C. A. Brigham and M. W. Schwartz, eds. Springer Verlag Berlin, Germany
    • Buerkle, C. A., D. E. Wolf, and L. H. Rieseberg. 2003. The origin and extinction of species through hybridization. Pp. 117-141 in C. A. Brigham and M. W. Schwartz, eds. Population viability in plants. Springer Verlag Berlin, Germany.
    • (2003) Population viability in plants , pp. 117-141
    • Buerkle, C.A.1    Wolf, D.E.2    Rieseberg, L.H.3
  • 9
    • 84970607183 scopus 로고
    • The Australian species of Nicotiana L. (Solanaceae)
    • Burbidge, N. T. 1960. The Australian species of Nicotiana L. (Solanaceae). Aust. J. Bot. 8:342-380.
    • (1960) Aust. J. Bot. , vol.8 , pp. 342-380
    • Burbidge, N.T.1
  • 12
    • 32944468604 scopus 로고    scopus 로고
    • Long-term genome diploidization in allopolyploid Nicotiana section Repandae (Solanaceae)
    • Clarkson, J. J., L. Y. Lim, A. Kovarik, M. W. Chase, S. Knapp, and A. R. Leitch. 2005. Long-term genome diploidization in allopolyploid Nicotiana section Repandae (Solanaceae). New Phytol. 168:241-252.
    • (2005) New Phytol. , vol.168 , pp. 241-252
    • Clarkson, J.J.1    Lim, L.Y.2    Kovarik, A.3    Chase, M.W.4    Knapp, S.5    Leitch, A.R.6
  • 13
    • 76849085431 scopus 로고    scopus 로고
    • Nuclear glutamine synthetase evolution in Nicotiana: phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids
    • Clarkson, J. J., L. J. Kelly, S. Knapp, A. R. Leitch, and M. W. Chase. 2010. Nuclear glutamine synthetase evolution in Nicotiana: phylogenetics and the origins of allotetraploid and homoploid (diploid) hybrids. Mol Phylogen. Evol. 55:99-112.
    • (2010) Mol Phylogen. Evol. , vol.55 , pp. 99-112
    • Clarkson, J.J.1    Kelly, L.J.2    Knapp, S.3    Leitch, A.R.4    Chase, M.W.5
  • 14
    • 0036935345 scopus 로고    scopus 로고
    • PCR-mediated recombination in amplification products derived from polyploid cotton
    • Cronn, R., M. Cedroni, T. Haselkorn, C. Grover, and J. F. Wendel. 2002. PCR-mediated recombination in amplification products derived from polyploid cotton. Theor. Appl. Genet. 104:482-489.
    • (2002) Theor. Appl. Genet. , vol.104 , pp. 482-489
    • Cronn, R.1    Cedroni, M.2    Haselkorn, T.3    Grover, C.4    Wendel, J.F.5
  • 15
    • 65649131928 scopus 로고    scopus 로고
    • Gene tree discordance, phylogenetic inference and the multispecies coalescent
    • Degnan, J. H., and N. A. Rosenberg. 2009. Gene tree discordance, phylogenetic inference and the multispecies coalescent. Trends Ecol. Evol. 24:332-340.
    • (2009) Trends Ecol. Evol. , vol.24 , pp. 332-340
    • Degnan, J.H.1    Rosenberg, N.A.2
  • 16
    • 77950931395 scopus 로고    scopus 로고
    • Dating the origins of polyploidy events
    • Doyle, J. J., and A. N. Egan. 2010. Dating the origins of polyploidy events. New Phytol. 186:73-85.
    • (2010) New Phytol. , vol.186 , pp. 73-85
    • Doyle, J.J.1    Egan, A.N.2
  • 17
    • 0346758118 scopus 로고    scopus 로고
    • Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine)
    • Doyle, J. J., J. L. Doyle, J. T. Rauscher, and A. H. D. Brown. 2004. Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine). New Phytol. 161:121-132.
    • (2004) New Phytol. , vol.161 , pp. 121-132
    • Doyle, J.J.1    Doyle, J.L.2    Rauscher, J.T.3    Brown, A.H.D.4
  • 18
    • 21744454112 scopus 로고    scopus 로고
    • Phylogenetics of modern birds in the era of genomics
    • Edwards, S. V., W. B. Jennings, and A. M. Shedlock. 2005. Phylogenetics of modern birds in the era of genomics. Proc. R. Soc. B 272:979-992.
    • (2005) Proc. R. Soc. B , vol.272 , pp. 979-992
    • Edwards, S.V.1    Jennings, W.B.2    Shedlock, A.M.3
  • 19
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 20
    • 0035957437 scopus 로고    scopus 로고
    • Speciation through homoploid hybridization between allotetraploids in peonies (Paeonia)
    • Ferguson, D., and T. Sang. 2001. Speciation through homoploid hybridization between allotetraploids in peonies (Paeonia). Proc. Natl. Acad. Sci. USA 98:3915-3919.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 3915-3919
    • Ferguson, D.1    Sang, T.2
  • 21
    • 49449105359 scopus 로고    scopus 로고
    • Nicotiana benthamiana: its history and future as a model for plant-pathogen interactions. Mol
    • Goodin, M. M., D. Zaitlin, R. A. Naidu, and S. A. Lommel. 2008. Nicotiana benthamiana: its history and future as a model for plant-pathogen interactions. Mol. Plant-Microbe Interact. 21:1015-1026.
    • (2008) Plant-Microbe Interact , vol.21 , pp. 1015-1026
    • Goodin, M.M.1    Zaitlin, D.2    Naidu, R.A.3    Lommel, S.A.4
  • 22
    • 0001997897 scopus 로고
    • The genus Nicotiana
    • Goodspeed, T. H. 1954. The genus Nicotiana. Chron. Bot. 16:1-536.
    • (1954) Chron. Bot. , vol.16 , pp. 1-536
    • Goodspeed, T.H.1
  • 24
    • 24744442298 scopus 로고
    • A taxonomic revision of Nicotiana (Solanaceae) in Australia
    • Horton, P. 1981. A taxonomic revision of Nicotiana (Solanaceae) in Australia. J. Adelaide Bot. Gard. 3:1-56.
    • (1981) J. Adelaide Bot. Gard. , vol.3 , pp. 1-56
    • Horton, P.1
  • 25
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogeny
    • Huelsenbeck, J. P., and F. Ronquist. 2001. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 26
    • 30744470609 scopus 로고    scopus 로고
    • Application of phylogenetic networks in evolutionary studies
    • Huson, D. H., and D. Bryant. 2006. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 23:254-267.
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 254-267
    • Huson, D.H.1    Bryant, D.2
  • 29
    • 64749105282 scopus 로고    scopus 로고
    • A Pleistocene inter-tribal allopolyploidization events precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand
    • Joly, S., P. B. Heenan, and P. J. Lockhart. 2009a. A Pleistocene inter-tribal allopolyploidization events precedes the species radiation of Pachycladon (Brassicaceae) in New Zealand. Mol. Phylogen. Evol. 51:365-372.
    • (2009) Mol. Phylogen. Evol. , vol.51 , pp. 365-372
    • Joly, S.1    Heenan, P.B.2    Lockhart, P.J.3
  • 30
    • 70149100417 scopus 로고    scopus 로고
    • A statistical approach for distinguishing hybridization and incomplete lineage sorting
    • Joly, S., P. B. Heenan, and P. J. Lockhart. 2009b. A statistical approach for distinguishing hybridization and incomplete lineage sorting. Am. Nat. 174:E54-E70.
    • (2009) Am. Nat. , vol.174
    • Joly, S.1    Heenan, P.B.2    Lockhart, P.J.3
  • 31
    • 77952300042 scopus 로고    scopus 로고
    • Intragenic recombination events and evidence for hybrid speciation in Nicotiana (Solanaceae)
    • Kelly, L. J., A. R. Leitch, J. J. Clarkson, R. B. Hunter, S. Knapp, and M. W. Chase. 2010. Intragenic recombination events and evidence for hybrid speciation in Nicotiana (Solanaceae). Mol. Biol. Evol. 27:781-799.
    • (2010) Mol. Biol. Evol. , vol.27 , pp. 781-799
    • Kelly, L.J.1    Leitch, A.R.2    Clarkson, J.J.3    Hunter, R.B.4    Knapp, S.5    Chase, M.W.6
  • 32
    • 0034777473 scopus 로고    scopus 로고
    • Relationships among Nicotiana species revealed by the 5S rDNA spacer sequence and fluorescence in situ hybridization
    • Kitamura, S., M. Inoue, N. Shikazono, and A. Tanaka. 2001. Relationships among Nicotiana species revealed by the 5S rDNA spacer sequence and fluorescence in situ hybridization. Theor. Appl. Genet. 103:678-686.
    • (2001) Theor. Appl. Genet. , vol.103 , pp. 678-686
    • Kitamura, S.1    Inoue, M.2    Shikazono, N.3    Tanaka, A.4
  • 33
    • 27744567990 scopus 로고    scopus 로고
    • Genomic relationships among Nicotiana species with different ploidy levels revealed by 5S rDNA spacer sequences and FISH/GISH
    • Kitamura, S., A. Tanaka, and M. Inoue. 2005. Genomic relationships among Nicotiana species with different ploidy levels revealed by 5S rDNA spacer sequences and FISH/GISH. Genes Genet. Syst. 80:251-60.
    • (2005) Genes Genet. Syst. , vol.80 , pp. 251-260
    • Kitamura, S.1    Tanaka, A.2    Inoue, M.3
  • 34
    • 1542350589 scopus 로고    scopus 로고
    • Nomenclatural changes and a new sectional classification in Nicotiana (Solanaceae)
    • Knapp, S., M. W. Chase, and J. J. Clarkson. 2004. Nomenclatural changes and a new sectional classification in Nicotiana (Solanaceae). Taxon 53:73-82.
    • (2004) Taxon , vol.53 , pp. 73-82
    • Knapp, S.1    Chase, M.W.2    Clarkson, J.J.3
  • 35
    • 48849101871 scopus 로고    scopus 로고
    • Evolution of rDNA in Nicotiana allopolyploids: a potential link between rDNA homogenization and epigenetics
    • Kovarik, A., M. Dadejova, K. Y. Lim, M. W. Chase, J. J. Clarkson, S. Knapp, and A. R. Leitch. 2008. Evolution of rDNA in Nicotiana allopolyploids: a potential link between rDNA homogenization and epigenetics. Ann. Bot. 101:815-823.
    • (2008) Ann. Bot. , vol.101 , pp. 815-823
    • Kovarik, A.1    Dadejova, M.2    Lim, K.Y.3    Chase, M.W.4    Clarkson, J.J.5    Knapp, S.6    Leitch, A.R.7
  • 36
    • 79961047536 scopus 로고    scopus 로고
    • Biogeography of Nicotiana section Suaveolentes (Solanaceae) reveals geographical tracks in arid Australia
    • Ladiges, P. Y., C. E. Marks, and G. Nelson. 2011. Biogeography of Nicotiana section Suaveolentes (Solanaceae) reveals geographical tracks in arid Australia. J. Biogeogr. 38:2066-2077.
    • (2011) J. Biogeogr. , vol.38 , pp. 2066-2077
    • Ladiges, P.Y.1    Marks, C.E.2    Nelson, G.3
  • 37
    • 48849097481 scopus 로고    scopus 로고
    • The ups and downs of genome size evolution in polyploidy species of Nicotiana (Solanaceae)
    • Leitch, I. J., L. Hanson, K. Y. Lim, A. Kovarik, J. J. Clarkson, M. W. Chase, and A. R. Leitch. 2008. The ups and downs of genome size evolution in polyploidy species of Nicotiana (Solanaceae). Ann. Bot. 101:805-814.
    • (2008) Ann. Bot. , vol.101 , pp. 805-814
    • Leitch, I.J.1    Hanson, L.2    Lim, K.Y.3    Kovarik, A.4    Clarkson, J.J.5    Chase, M.W.6    Leitch, A.R.7
  • 38
    • 34547662934 scopus 로고    scopus 로고
    • Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years
    • Lim, K. Y., A. Kovarik, R. Matyasek, M. W. Chase, J. J. Clarkson, M. A. Grandbastien, and A. R. Leitch. 2007. Sequence of events leading to near-complete genome turnover in allopolyploid Nicotiana within five million years. New Phytol. 175:756-763.
    • (2007) New Phytol , vol.175 , pp. 756-763
    • Lim, K.Y.1    Kovarik, A.2    Matyasek, R.3    Chase, M.W.4    Clarkson, J.J.5    Grandbastien, M.A.6    Leitch, A.R.7
  • 39
    • 17044416291 scopus 로고    scopus 로고
    • Reconstructing patterns of reticulate evolution in plants
    • Linder, C. R., and L. H. Rieseberg. 2004. Reconstructing patterns of reticulate evolution in plants. Am. J. Bot. 91:1700-1708.
    • (2004) Am. J. Bot. , vol.91 , pp. 1700-1708
    • Linder, C.R.1    Rieseberg, L.H.2
  • 40
    • 46249095233 scopus 로고    scopus 로고
    • Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis
    • Löytynoja A., and N. Goldman. 2008. Phylogeny-aware gap placement prevents errors in sequence alignment and evolutionary analysis. Science 320:1632-1635.
    • (2008) Science , vol.320 , pp. 1632-1635
    • Löytynoja, A.1    Goldman, N.2
  • 41
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison, W. P. 1997. Gene trees in species trees. Syst. Biol. 46:523-536.
    • (1997) Syst. Biol , vol.46 , pp. 523-536
    • Maddison, W.P.1
  • 43
    • 33644606488 scopus 로고    scopus 로고
    • Inferring phylogeny despite incomplete lineage sorting
    • Maddison, W. P., and L. L. Knowles. 2006. Inferring phylogeny despite incomplete lineage sorting. Syst. Biol. 55:21-30.
    • (2006) Syst. Biol. , vol.55 , pp. 21-30
    • Maddison, W.P.1    Knowles, L.L.2
  • 44
    • 84871982888 scopus 로고    scopus 로고
    • Mesquite: a modular system for evolutionary analysis. Version 2.5.
    • Maddison, W. P., and D. R. Maddison. 2008. Mesquite: a modular system for evolutionary analysis. Version 2.5. Available at http://mesquiteproject.org.
    • (2008)
    • Maddison, W.P.1    Maddison, D.R.2
  • 45
    • 77749245870 scopus 로고    scopus 로고
    • Definition of South Pacific taxa of Nicotiana section Suaveolentes
    • Marks, C. E. 2010. Definition of South Pacific taxa of Nicotiana section Suaveolentes. Muelleria 28:74-84.
    • (2010) Muelleria , vol.28 , pp. 74-84
    • Marks, C.E.1
  • 46
    • 79961043839 scopus 로고    scopus 로고
    • Comparative morphology and phylogeny of Nicotiana section Suaveolentes (Solanaceae) in Australia and the South Pacific
    • Marks, C. E., E. Newbigin, and P. Y. Ladiges. 2011a. Comparative morphology and phylogeny of Nicotiana section Suaveolentes (Solanaceae) in Australia and the South Pacific. Aust. Syst. Bot. 24:61-86.
    • (2011) Aust. Syst. Bot. , vol.24 , pp. 61-86
    • Marks, C.E.1    Newbigin, E.2    Ladiges, P.Y.3
  • 47
  • 48
    • 77955235237 scopus 로고    scopus 로고
    • Unraveling cryptic reticulate relationships and the origin of orphan hybrid disjunct populations in Narcissus
    • Marques, I., G. Nieto Feliner, D. D. Munt, M. A. Martins-Loução, and J. F. Aguilar. 2010. Unraveling cryptic reticulate relationships and the origin of orphan hybrid disjunct populations in Narcissus. Evolution 64:2353-2368.
    • (2010) Evolution , vol.64 , pp. 2353-2368
    • Marques, I.1    Nieto Feliner, G.2    Munt, D.D.3    Martins-Loução, M.A.4    Aguilar, J.F.5
  • 49
  • 50
    • 77949654029 scopus 로고    scopus 로고
    • Fossil record and age of the Asteridae
    • Martínez-Millán, M. 2010. Fossil record and age of the Asteridae. Bot. Rev. 76:83-135.
    • (2010) Bot. Rev. , vol.76 , pp. 83-135
    • Martínez-Millán, M.1
  • 51
    • 77956212117 scopus 로고    scopus 로고
    • Reticulate evolutionary history of a complex group of grasses: phylogeny of Elymus StStHH allotetraploids based on three nuclear genes
    • Mason-Gamer, R. J., M. M. Burns, and M. Naum. 2010. Reticulate evolutionary history of a complex group of grasses: phylogeny of Elymus StStHH allotetraploids based on three nuclear genes. PLoS ONE 5:e10989.
    • (2010) PLoS ONE , vol.5
    • Mason-Gamer, R.J.1    Burns, M.M.2    Naum, M.3
  • 52
    • 0029110268 scopus 로고
    • A theoretical assessment of recombinational speciation
    • McCarthy, E. M., M. A. Asmussen, and W. W. Anderson. 1995. A theoretical assessment of recombinational speciation. Heredity 74:502-509.
    • (1995) Heredity , vol.74 , pp. 502-509
    • McCarthy, E.M.1    Asmussen, M.A.2    Anderson, W.W.3
  • 53
    • 84871995035 scopus 로고    scopus 로고
    • The effect of molecular, morphological and spectral reflectance evolution on Nicotiana polyploids of different ages. Ph.D. thesis, Queen Mary, University of London, U. K
    • McCarthy, E. W. 2010. The effect of molecular, morphological and spectral reflectance evolution on Nicotiana polyploids of different ages. Ph.D. thesis, Queen Mary, University of London, U. K.
    • (2010)
    • McCarthy, E.W.1
  • 54
    • 0002062617 scopus 로고
    • Nicotiana in der Afrikanischen Namib-ein Plflanzengeographiches und phylogenetisches Ratsel
    • Merxmüller, H., and K. P. Butler. 1975. Nicotiana in der Afrikanischen Namib-ein Plflanzengeographiches und phylogenetisches Ratsel. Mitt. Bot. Staatssammlung München 12:91-104.
    • (1975) Mitt. Bot. Staatssammlung München , vol.12 , pp. 91-104
    • Merxmüller, H.1    Butler, K.P.2
  • 55
    • 0036302420 scopus 로고    scopus 로고
    • The origin of tobacco's T genome is traced to a particular lineage within Nicotiana tomentosiformis (Solanaceae)
    • Murad, L., K. Y. Lim, V. Christopodulou, R. Matyasek, C. P. Lichtenstein, A. Kovarik, and A. R. Leitch. 2002. The origin of tobacco's T genome is traced to a particular lineage within Nicotiana tomentosiformis (Solanaceae). Am. J. Bot. 89:921-928.
    • (2002) Am. J. Bot. , vol.89 , pp. 921-928
    • Murad, L.1    Lim, K.Y.2    Christopodulou, V.3    Matyasek, R.4    Lichtenstein, C.P.5    Kovarik, A.6    Leitch, A.R.7
  • 57
    • 39149141072 scopus 로고    scopus 로고
    • AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
    • Nylander, J. A. A., J. C. Wilgenbusch, D. L. Warren, L. David, and D. L. Swofford. 2008. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 24:581-583.
    • (2008) Bioinformatics , vol.24 , pp. 581-583
    • Nylander, J.A.A.1    Wilgenbusch, J.C.2    Warren, D.L.3    David, L.4    Swofford, D.L.5
  • 59
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: testing the model of DNA substitution
    • Posada, D., and K. A. Crandall. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 60
    • 84871966065 scopus 로고    scopus 로고
    • Tracer v1.4
    • Rambaut, A and A. J. Drummond. 2007. Tracer v1.4, Available at http://beast.bio.ed.ac.uk/Tracer.
    • (2007)
    • Rambaut, A.1    Drummond, A.J.2
  • 61
  • 62
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist, F., and J. P. Huelsenbeck. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 64
    • 77956360994 scopus 로고    scopus 로고
    • Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes
    • Russell, A., S. Samuel, V. Klejna, M. H. J. Barfuss, B. Rupp, and M. W. Chase. 2010. Reticulate evolution in diploid and tetraploid species of Polystachya (Orchidaceae) as shown by plastid DNA sequences and low-copy nuclear genes. Ann. Bot. 106:37-56.
    • (2010) Ann. Bot. , vol.106 , pp. 37-56
    • Russell, A.1    Samuel, S.2    Klejna, V.3    Barfuss, M.H.J.4    Rupp, B.5    Chase, M.W.6
  • 66
    • 78149250431 scopus 로고    scopus 로고
    • What we still don't know about polyploidy
    • Soltis, D. E., R. J. A. Buggs, J. J. Doyle, and P. S. Soltis. 2010. What we still don't know about polyploidy. Taxon 59:1387-1403.
    • (2010) Taxon , vol.59 , pp. 1387-1403
    • Soltis, D.E.1    Buggs, R.J.A.2    Doyle, J.J.3    Soltis, P.S.4
  • 69
    • 34247098318 scopus 로고    scopus 로고
    • Deciphering ancient rapid radiations
    • Whitfield, J. B., and P. J. Lockhart. 2007. Deciphering ancient rapid radiations. Trends Ecol. Evol. 22:258-265.
    • (2007) Trends Ecol. Evol. , vol.22 , pp. 258-265
    • Whitfield, J.B.1    Lockhart, P.J.2
  • 70
    • 58149239791 scopus 로고    scopus 로고
    • Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees
    • Whitfield, J. B., S. A. Cameron, D. H. Huson, and M. A. Steel. 2008. Filtered Z-closure supernetworks for extracting and visualizing recurrent signal from incongruent gene trees. Syst. Biol. 57:939-947.
    • (2008) Syst. Biol. , vol.57 , pp. 939-947
    • Whitfield, J.B.1    Cameron, S.A.2    Huson, D.H.3    Steel, M.A.4
  • 72
    • 33747847975 scopus 로고    scopus 로고
    • Evolution of proteinase inhibitor defences in North American allopolyploid species of Nicotiana
    • Wu, J., C. Hettenhausen, and I. T. Baldwin. 2006. Evolution of proteinase inhibitor defences in North American allopolyploid species of Nicotiana. Planta 224:750-760.
    • (2006) Planta , vol.224 , pp. 750-760
    • Wu, J.1    Hettenhausen, C.2    Baldwin, I.T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.