Molecular tagging of a novel rust resistance gene R12 in sunflower (Helianthus annuus L.)

Theoretical and Applied Genetics

Volumn 126, Issue 1, 2013, Pages 93-99

  Gong, L ^a   Hulke, B S ^b   Gulya, T J ^b   Markell, S G ^a   Qi, L L ^b  

^a NORTH DAKOTA STATE UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELISM TESTS; BREEDING LINES; BULKED SEGREGANT ANALYSIS; DOMINANT GENES; ECONOMIC LOSS; GENETIC DISTANCES; GENETIC MAPPING; HELIANTHUS ANNUUS; LINKAGE GROUPS; MALE FERTILITY; MOLECULAR MARKER; MOLECULAR TAGGING; NORTHERN GREAT PLAINS; REPULSION PHASE; RUST RESISTANCE; RUST RESISTANCE GENES; SEED QUALITY;

LOSSES;

GENES;

ALLELE; ARTICLE; BASIDIOMYCETES; CHROMOSOME MAP; CROSS BREEDING; DISEASE RESISTANCE; GENETIC LINKAGE; GENETIC MARKER; GENETICS; HOMOZYGOTE; IMMUNOLOGY; METHODOLOGY; MOLECULAR CLONING; PHENOTYPE; PLANT DISEASE; PLANT GENE; SUNFLOWER; VIRULENCE;

ALLELES; BASIDIOMYCOTA; CHROMOSOME MAPPING; CLONING, MOLECULAR; CROSSES, GENETIC; DISEASE RESISTANCE; GENES, PLANT; GENETIC LINKAGE; GENETIC MARKERS; HELIANTHUS; HOMOZYGOTE; PHENOTYPE; PLANT DISEASES; VIRULENCE;

HELIANTHUS; HELIANTHUS ANNUUS; PUCCINIA HELIANTHI;

EID: 84871922179     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-012-1962-z     Document Type: Article

References (55)

1. Adv) resistance genes reside in close proximity to tandemly duplicated clusters of non-TIR-like NBS-LRR-encoding genes on sunflower chromosomes 1 and 13. Theor Appl Genet 122: 1211-1221.
2. Bachlava E, Taylor CA, Tang S, Bowers JE, Mandel JR, Burke JM, Knapp SJ (2012) SNP discovery and development of a high-density genotyping array for sunflower. PLoS ONE 7(1): e29814. doi: 10. 1371/journal. pone. 0029814.
3. Bert PF, De Labrouhe DT, Philippon J, Mouzeyar S, Jouan I, Nicolas P, Vear F (2001) Identification of a second linkage group carrying genes controlling resistance to downy mildew (Plasmopara halstedii) in sunflower (Helianthus annuus L.). Theor Appl Genet 103: 992-997.
4. Bouzidi MF, Badaoui S, Cambon F, Vear F, De Labrouhe DT, Nicolas P, Mouzeyar S (2002) Molecular analysis of a major locus for resistance to downy mildew in sunflower with specific PCR-based markers. Theor Appl Genet 104: 592-600.
5. Bowers JE, Bachlava E, Brunick RL, Rieseberg LH, Knapp SJ, Burke JM (2012) Development of a 10, 000 locus genetic map of the sunflower genome based on multiple crosses. Genes Genomes Genetics 2: 721-729.
6. Burke JM, Tang S, Knapp SJ, Rieseberg LH (2002) Genetic analysis of sunflower domestication. Genetics 161: 1257-1267.
7. de Romano AB, Romano C, Bulos M, Altieri E, Sala C (2010) A new gene for resistance to downy mildew in sunflower. In: Proc Int Symposium "Sunflower breeding on resistance to diseases", Krasnodar, Russia, June 23-24.
8. Del Moral L, Fernández-Martínez JM, Velasco L, Pérez-Vich B (2012) Quantitative trait loci for seed tocopherol content in sunflower. Crop Sci 52: 786-794.
9. Arg from Helianthus argophyllus is unlinked to other known downy mildew resistance genes in sunflower. Theor Appl Genet 109: 1083-1086.
10. Friskop A, Gulya T, Jordahl J, Ramsett M, Harveson R, Acevedo M, Harveson R, Markell S (2012) Determination of Puccinia helianthi races in the Unites States Northern Great Plains. In: Proceedings of the 18th international sunflower conference, Mardel plata and Balcarce, Argentina Feb 27-Mar 1, 2012. pp 214-218.
11. 1. Genome 44: 205-212.
12. Gentzbittel L, Mouzeyar F, Badaoui S, Mestries E, Vear F, de Labrouhe DT, Nicolas P (1998) Cloning of molecular markers for disease resistance in sunflower, Helianthus annuus L. Theor Appl Genet 96: 519-525.
13. Goulter KC (1990) Breeding of a rust differential sunflower line. In: Proceedings of the 8th Australian sunflower association workshop, Toowoomba, 19-22 Mar 1990, pp 120-124.
14. Gulya TJ (2006) The sunflower rust situation: current races in the northern and central Great Plains, and resistance in oilseed and confection hybrids. In: Proceedings of 28th sunflower research workshop. Fargo, ND. 11-12 Jan 2006. http://www. sunflowernsa. com/research/research-workshop/documents/Gulya_Rust_06. pdf.
15. Gulya TJ, Markell S (2009) Sunflower rust status-2008. Race frequency across the midwest and resistance among commercial hybrids. http://www. sunflowernsa. com/uploads/Gulya_RustStatus_09. pdf.
16. Gulya TJ, Masirevic S (1996) Inoculation and evaluation methods for sunflower rust. In: Proceedings of 18th sunflower research workshop. Fargo, ND, 11-12 Jan 1996, pp 31-38.
17. Gulya TJ, Venette R, Venette JR, Lamey HA (1990) Sunflower rust. NDSU Ext. Ser. Bull., Fargo, p 998. http://www. ag. ndsu. edu/pubs/plantsci/rowcrops/pp998w. htm.
18. Gulya TJ, Markell S, McMullen M, Harveson B, Osborne L (2011) New virulent races of downy mildew: distribution, status of DM resistant hybrids, and USDA sources of resistance. In: Proc 33th Sunflower Research Forum. Fargo ND, January 12-13 http://www. sunflowernsa. com/uploads/resources/575/gulya_virulentracesdownymildew. pdf.
19. Heesacker A, Kishore VK, Gao W, Tang S, Kolkman JM, Gingle A, Matvienko M, Kozik A, Michelmore RM, Lai Z, Rieseberg LH, Knapp SJ (2008) SSRs and INDELs mined from the sunflower EST database: abundance, polymorphisms, and cross-taxa utility. Theor Appl Genet 117: 1021-1029.
20. Hulke BS, Miller JF, Gulya TJ (2010) Registration of the restorer oilseed sunflower germplasm RHA 464 possessing genes for resistance to downy mildew and sunflower rust. J Plant Regist 4: 249-254.
21. Jan CC, Gulya TJ (2006) Registration of a sunflower germplasm resistant to rust, downy mildew and virus. Crop Sci 46: 1829.
22. Jan CC, Quresh Z, Gulya TJ (2004) Registration of seven rust resistance sunflower germplasms. Crop Sci 44: 1887-1888.
23. Kane NC, Gill N, King MG, Bowers JE, Berges H, Gouzy J, Bachlava E, Langlade NB, Lai Z, Stewart M, Burke JM, Vincourt P, Knapp SJ, Rieseberg LH (2011) Progress towards a reference genome for sunflower. Botany 89: 429-437.
24. Lambrides CJ, Miller JF (1994) Inheritance of rust resistance in a source of MC29 sunflower germplasm. Crop Sci 34: 1225-1230.
25. Lawson WR, Goulter KC, Henry RJ, Kong GA, Kochman JK (1998) Marker-assisted selection for two rust resistance genes in sunflower. Mol Breeding 4: 227-234.
26. 2 rust resistance gene in sunflower (Helianthus annuus L.) facilitate anticipatory breeding for this disease variant. Mol Breed 28: 569-576.
27. 16 downy mildew resistance gene from HA-R4 to facilitate marker-assisted selection in sunflower. Theor Appl Genet. doi: 10. 1007/s00122-012-1820-z.
28. Markell S, Gulya T, McKay K, Hutter M, Hollingsworth C, Ulstad V, Koch R, Knudsvig A (2009) Widespread occurrence of the aecial stage of sunflower rust caused by Puccinia helianthi in North Dakota and Minnesota in 2008. Plant Dis 93: 668-669.
29. Miah MAJ, Sackston WE (1970) Genetics of host-pathogen interaction in sunflower. Phytoprotection 51: 1-16.
30. Michelmore RW, Paran I, Kesseli RV (1991) Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations. Proc Natl Acad Sci USA 88: 9828-9832.
31. Miller JF, Gulya TJ (1997) Registration of eight maintainer (HA 393, HA 394 and HA 402 to HA 407) and seven restorer (RHA 395 to RHA 401) sunflower germplasm lines. Crop Sci 37: 1988-1989.
32. Miller JF, Gulya TJ (2001) Registration of three rust resistant sunflower germplasm populations. Crop Sci 41: 601.
33. Miller JF, Rodriguez RH, Gulya TJ (1988) Evaluation of genetic materials for inheritance of resistance to Race 4 rust in sunflower. In: Proceedings of the 12th international sunflower conference, Novi Sad, Yugoslavia, 25-29 July 1988. International Sunflower Association, Paris, pp 361-365.
34. Moreno PS, de Romano AB, Romano MC, Vergani P, Sposaro M, Bulos M, Altieri E, Ramos ML, Sala C (2012) A survey of physiological races of Puccinia helianthi in Argentina. In: Proceedings of the 18th international sunflower conference, Mardel plata & Balcarce, Argentina Feb 27-Mar 1, 2012. pp 278-279.
35. 1 locus for resistance to Plasmopara halstedii race 1. Theor Appl Genet 91: 733-737.
36. 13 in cultivated sunflower (Helianthus annuus L.). Theor Appl Genet 119: 795-803.
37. Panković D, Radovanović N, Jocić S, Satovic Z, Skorić D (2007) Development of co-dominant amplified polymorphic sequence markers for resistance of sunflower to downy mildew race 730. Plant Breed 126: 440-444.
38. 2 for resistance in the host. Can J Plant Sci 43: 490-496.
39. Qi LL, Gulya TJ, Seiler GJ, Hulke BS, Vick BA (2011a) Identification of resistance to new virulent races of rust in sunflowers and validation of DNA markers in the gene pool. Phytopathology 101: 241-249.
40. 4 to a large NBS-LRR cluster on linkage group 13 of sunflower. Theor Appl Genet 123: 351-358.
41. 5. Mol Breed 30: 745-756.
42. 11 gene conferring resistance to recently emerged rust races, tightly linked to male fertility restoration, in sunflower (Helianthus annuus L.) Theor Appl Genet. doi: 10. 1007/s00122-012-1883-x.
43. 8 locus for resistance to downy mildew in sunflower. Theor Appl Genet 106: 1438-1446.
44. 8 locus for resistance to Plasmopara halstedii in sunflower, Helianthus annuus L. from complete CC-NBS-LRR sequences. Theor Appl Genet 109: 176-185.
45. Roeckel-Drevet P, Gagne G, Mouzeyar S, Gentzbittel L, Philippon J, Nicolas P, de Labrouhe DT, Vear F (1996) Colocation of downy mildew (Plasmopara halstedii) resistance genes in sunflower (Helianthus annuus L.). Euphytica 91: 225-228.
46. Seiler GJ, Jan CC (1997) Registration of 10 interspecific germplasm fertility restoration populations for sunflower PET1 male-sterile cytoplasm. Crop Sci 37: 1989-1991.
47. Stam P (1993) Construction of integrated genetic linkage maps by means of a new computer package: JoinMap. Plant J 3: 739-744.
48. Tang S, Yu JK, Slabaugh MB, Shintani DK, Knapp SJ (2002) Simple sequence repeat map of the sunflower genome. Theor Appl Genet 105: 1124-1136.
49. Tang S, Kishore VK, Knapp SJ (2003) PCR-multiplexes for a genome-wide framework of simple sequence repeat marker loci in cultivated sunflower. Theor Appl Genet 107: 6-19.
50. Vear F, Gentzbittel L, Philippon J, Mouzeyar S, Mestries E, Roeckel-Drevet P, de Labroube DT, Nicolas P (1997) The genetics of resistance to five races of downy mildew (Plasmopara halstedii) in sunflower (Helianthus annuus L.). Theor Appl Genet 95: 584-589.
51. Venkatramana P, Hulke B, Qi LL, Schultz Q (2012) SNP assisted breeding for sunflower development. In: Proceedings of the 18th international sunflower conference, Argentina, Feb 27-Mar 2012. International Sunflower Association, Paris, pp 1018-1019.
52. ARG introduced from the wild species Helianthus argophyllus. Theor Appl Genet 121: 1633-1644.
53. Yang SM, Antonelli EF, Luciano A, Luciani ND (1986) Reactions of Argentine and Australian sunflower rust differentials to four North American cultures of Puccinia helianthi from North Dakota. Plant Dis 70: 883-886.
54. 6: a new gene in sunflower for resistance to Puccinia helianthi. Phytopathology 79: 474-477.
55. Yu JK, Tang S, Slabaugh MB, Heesacker A, Cole G, Herring M et al (2003) Towards a saturated molecular genetic linkage map for cultivated sunflower. Crop Sci 43: 367-387.