-
1
-
-
0038744804
-
SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines
-
Ching A, Caldwell KS, Jung M, Dolan M, Smith OS, et al. (2002) SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines. BMC Genet 3: 19.
-
(2002)
BMC Genet
, vol.3
, pp. 19
-
-
Ching, A.1
Caldwell, K.S.2
Jung, M.3
Dolan, M.4
Smith, O.S.5
-
2
-
-
0036017145
-
Single nucleotide polymorphism (SNP) discovery in porcine expressed genes
-
Fahrenkrug SC, Freking BA, Smith TPL, Rohrer GA, Keele JW, (2002) Single nucleotide polymorphism (SNP) discovery in porcine expressed genes. Anim Genet 33: 186-195.
-
(2002)
Anim Genet
, vol.33
, pp. 186-195
-
-
Fahrenkrug, S.C.1
Freking, B.A.2
Smith, T.P.L.3
Rohrer, G.A.4
Keele, J.W.5
-
3
-
-
4644353880
-
An SNP resource for rice genetics and breeding based on subspecies Indica and Japonica genome alignments
-
Feltus FA, Wan J, Schulze SR, Estill JC, Jiang N, et al. (2004) An SNP resource for rice genetics and breeding based on subspecies Indica and Japonica genome alignments. Genome Res 14: 1812-1819.
-
(2004)
Genome Res
, vol.14
, pp. 1812-1819
-
-
Feltus, F.A.1
Wan, J.2
Schulze, S.R.3
Estill, J.C.4
Jiang, N.5
-
4
-
-
28344445873
-
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress
-
Rostoks N, Mudie S, Cardle L, Russell J, Ramsay L, et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Mol Genet and Genomics 274: 515-527.
-
(2005)
Mol Genet and Genomics
, vol.274
, pp. 515-527
-
-
Rostoks, N.1
Mudie, S.2
Cardle, L.3
Russell, J.4
Ramsay, L.5
-
5
-
-
0037355118
-
Single-nucleotide polymorphisms in soybean
-
Zhu YL, Song QJ, Hyten DL, Van Tassell CP, Matukumalli LK, et al. (2003) Single-nucleotide polymorphisms in soybean. Genet 163: 1123-1134.
-
(2003)
Genet
, vol.163
, pp. 1123-1134
-
-
Zhu, Y.L.1
Song, Q.J.2
Hyten, D.L.3
van Tassell, C.P.4
Matukumalli, L.K.5
-
6
-
-
42149108480
-
High-throughput genotyping with the GoldenGate assay in the complex genome of soybean
-
Hyten DL, Song Q, Choi I-Y, Yoon M-S, Specht JE, et al. (2008) High-throughput genotyping with the GoldenGate assay in the complex genome of soybean. Theor Appl Genet 116: 945-952.
-
(2008)
Theor Appl Genet
, vol.116
, pp. 945-952
-
-
Hyten, D.L.1
Song, Q.2
Choi, I.-Y.3
Yoon, M.-S.4
Specht, J.E.5
-
7
-
-
67651107321
-
Development and characterization of a high density SNP genotyping assay for cattle
-
Matukumalli LK, Lawley CT, Schnabel RD, Taylor JF, Allan MF, et al. (2009) Development and characterization of a high density SNP genotyping assay for cattle. PLoS ONE 4 (4): e5350.
-
(2009)
PLoS ONE
, vol.4
, Issue.4
-
-
Matukumalli, L.K.1
Lawley, C.T.2
Schnabel, R.D.3
Taylor, J.F.4
Allan, M.F.5
-
8
-
-
68349137618
-
Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology
-
Ramos AM, Crooijmans RPMA, Affara NA, Amaral AJ, Archibald AL, et al. (2009) Design of a high density SNP genotyping assay in the pig using SNPs identified and characterized by next generation sequencing technology. PLoS ONE 4 (8): e6524.
-
(2009)
PLoS ONE
, vol.4
, Issue.8
-
-
Ramos, A.M.1
Crooijmans, R.P.M.A.2
Affara, N.A.3
Amaral, A.J.4
Archibald, A.L.5
-
9
-
-
79961230602
-
Progress towards a reference genome for sunflower
-
Kane NC, Gill N, King MG, Bowers JE, Berges H, et al. (2011) Progress towards a reference genome for sunflower. Botany 89: 429-437.
-
(2011)
Botany
, vol.89
, pp. 429-437
-
-
Kane, N.C.1
Gill, N.2
King, M.G.3
Bowers, J.E.4
Berges, H.5
-
10
-
-
27744574369
-
Identification and mapping of SNPs and candidate genes in sunflower: towards a functional map
-
Lai Z, Livingstone K, Zou Y, Church SA, Knapp SJ, et al. (2005) Identification and mapping of SNPs and candidate genes in sunflower: towards a functional map. Theor Appl Genet 111: 1532-1544.
-
(2005)
Theor Appl Genet
, vol.111
, pp. 1532-1544
-
-
Lai, Z.1
Livingstone, K.2
Zou, Y.3
Church, S.A.4
Knapp, S.J.5
-
11
-
-
40749103376
-
Identification of single nucleotide polymorphisms and analysis of linkage disequilibrium in sunflower elite inbred lines using the candidate gene approach
-
Fusari CM, Lia VV, Hopp HE, Heinz RA, Paniego NB, (2008) Identification of single nucleotide polymorphisms and analysis of linkage disequilibrium in sunflower elite inbred lines using the candidate gene approach. BMC Plant Bio 8: 7.
-
(2008)
BMC Plant Bio
, vol.8
, pp. 7
-
-
Fusari, C.M.1
Lia, V.V.2
Hopp, H.E.3
Heinz, R.A.4
Paniego, N.B.5
-
12
-
-
35048890118
-
Single Nucleotide Polymorphisms and Linkage Disequilibrium in Sunflower
-
Kolkman JM, Berry ST, Leon AJ, Slabaugh MB, Tang S, Gao W, et al. (2007) Single Nucleotide Polymorphisms and Linkage Disequilibrium in Sunflower. Genet 177: 457-468.
-
(2007)
Genet
, vol.177
, pp. 457-468
-
-
Kolkman, J.M.1
Berry, S.T.2
Leon, A.J.3
Slabaugh, M.B.4
Tang, S.5
Gao, W.6
-
13
-
-
33744502414
-
Patterns of nucleotide diversity in wild and cultivated sunflower
-
Liu A, Burke JM, (2006) Patterns of nucleotide diversity in wild and cultivated sunflower. Genet 173: 321-330.
-
(2006)
Genet
, vol.173
, pp. 321-330
-
-
Liu, A.1
Burke, J.M.2
-
14
-
-
3042615882
-
Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs
-
Chevreux B, Pfisterer T, Drescher B, Driesel AJ, Muller WEG, et al. (2004) Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs. Genome Res 14: 1147-1159.
-
(2004)
Genome Res
, vol.14
, pp. 1147-1159
-
-
Chevreux, B.1
Pfisterer, T.2
Drescher, B.3
Driesel, A.J.4
Muller, W.E.G.5
-
15
-
-
0037460985
-
TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets
-
Pertea G, Huang XQ, Liang F, Antonescu V, Sultana R, et al. (2003) TIGR Gene Indices clustering tools (TGICL): a software system for fast clustering of large EST datasets. Bioinformatics 19: 651-652.
-
(2003)
Bioinformatics
, vol.19
, pp. 651-652
-
-
Pertea, G.1
Huang, X.Q.2
Liang, F.3
Antonescu, V.4
Sultana, R.5
-
16
-
-
33645467566
-
MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools
-
Liang C, Sun F, Wang HM, Qu JF, Freeman RM, et al. (2006) MAGIC-SPP: a database-driven DNA sequence processing package with associated management tools. BMC Bioinformatics 7: 115.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 115
-
-
Liang, C.1
Sun, F.2
Wang, H.M.3
Qu, J.F.4
Freeman, R.M.5
-
17
-
-
24644503098
-
Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa A, Gotz S, Garcia-Gomez JM, Terol J, Talon M, et al. (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21: 3674-3676.
-
(2005)
Bioinformatics
, vol.21
, pp. 3674-3676
-
-
Conesa, A.1
Gotz, S.2
Garcia-Gomez, J.M.3
Terol, J.4
Talon, M.5
-
18
-
-
45549089420
-
High-throughput functional annotation and data mining with the Blast2GO suite
-
Götz S, Garcia-Gomez JM, Terol J, Williams TD, Nagaraj SH, et al. (2008) High-throughput functional annotation and data mining with the Blast2GO suite. Nucleic Acids Res 36: 3420-3435.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 3420-3435
-
-
Götz, S.1
Garcia-Gomez, J.M.2
Terol, J.3
Williams, T.D.4
Nagaraj, S.H.5
-
19
-
-
33747860914
-
Additional Gene Ontology structure for improved biological reasoning
-
Myhre S, Tveit H, Mollestad T, Laegreid A, (2006) Additional Gene Ontology structure for improved biological reasoning. Bioinformatics 22: 2020-2027.
-
(2006)
Bioinformatics
, vol.22
, pp. 2020-2027
-
-
Myhre, S.1
Tveit, H.2
Mollestad, T.3
Laegreid, A.4
-
20
-
-
0034800374
-
InterProScan - an integration platform for the signature-recognition methods in InterPro
-
Zdobnov EM, Apweiler R, (2001) InterProScan- an integration platform for the signature-recognition methods in InterPro. Bioinformatics 17: 847-848.
-
(2001)
Bioinformatics
, vol.17
, pp. 847-848
-
-
Zdobnov, E.M.1
Apweiler, R.2
-
21
-
-
75549090213
-
KEGG for representation and analysis of molecular networks involving diseases and drugs
-
Kanehisa M, Goto S, Furumichi M, Tanabe M, Hirakawa M, (2010) KEGG for representation and analysis of molecular networks involving diseases and drugs. Nucleic Acids Res 38: D355-D360.
-
(2010)
Nucleic Acids Res
, vol.38
-
-
Kanehisa, M.1
Goto, S.2
Furumichi, M.3
Tanabe, M.4
Hirakawa, M.5
-
22
-
-
0019321718
-
Rapid isolation of high molecular weight plant DNA
-
Murray MG, Thompson WF, (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8: 4321-4325.
-
(1980)
Nucleic Acids Res
, vol.8
, pp. 4321-4325
-
-
Murray, M.G.1
Thompson, W.F.2
-
23
-
-
33644871292
-
GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research
-
Peakall R, Smouse PE, (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6: 288-295.
-
(2006)
Mol Ecol Notes
, vol.6
, pp. 288-295
-
-
Peakall, R.1
Smouse, P.E.2
-
24
-
-
0034118493
-
Inference of population structure using multilocus genotype data
-
Pritchard JK, Stephens M, Donnelly P, (2000) Inference of population structure using multilocus genotype data. Genet 155: 945-956.
-
(2000)
Genet
, vol.155
, pp. 945-956
-
-
Pritchard, J.K.1
Stephens, M.2
Donnelly, P.3
-
25
-
-
21244479740
-
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
-
Evanno, Regnaut S, Goudet J, (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol Ecol 14: 2611-2620.
-
(2005)
Mol Ecol
, vol.14
, pp. 2611-2620
-
-
Evanno1
Regnaut, S.2
Goudet, J.3
-
26
-
-
0018147653
-
Estimation of average heterozygosity and genetic distance from a small number of individuals
-
Nei M, (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genet 89: 583-590.
-
(1978)
Genet
, vol.89
, pp. 583-590
-
-
Nei, M.1
-
27
-
-
33644772171
-
Variation in mutation dynamics across the maize genome as a function of regional and flanking base composition
-
Morton BR, Bi IV, McMullen MD, Gaut BS, (2006) Variation in mutation dynamics across the maize genome as a function of regional and flanking base composition. Genet 172: 569-577.
-
(2006)
Genet
, vol.172
, pp. 569-577
-
-
Morton, B.R.1
Bi, I.V.2
McMullen, M.D.3
Gaut, B.S.4
-
28
-
-
4744359031
-
The influence of neighboring-nucleotide composition on single nucleotide polymorphisms (SNPs) in the mouse genome and its comparison with human SNPs
-
Zhang F, Zhao Z, (2004) The influence of neighboring-nucleotide composition on single nucleotide polymorphisms (SNPs) in the mouse genome and its comparison with human SNPs. Genomics 84: 785-795.
-
(2004)
Genomics
, vol.84
, pp. 785-795
-
-
Zhang, F.1
Zhao, Z.2
-
29
-
-
36249009795
-
High-resolution phylogeny for Helianthus (Asteraceae) using the 18S-26S ribosomal DNA external transcribed spacer
-
Timme R, Simpson BB, Linder CR, (2007) High-resolution phylogeny for Helianthus (Asteraceae) using the 18S-26S ribosomal DNA external transcribed spacer. Am J Bot 94: 1837-1852.
-
(2007)
Am J Bot
, vol.94
, pp. 1837-1852
-
-
Timme, R.1
Simpson, B.B.2
Linder, C.R.3
-
30
-
-
80054784331
-
Genetic diversity and population structure in cultivated sunflower and a comparison to its wild progenitor, Helianthus annuus L
-
Mandel JR, Dechaine JM, Marek LF, Burke JM, (2011) Genetic diversity and population structure in cultivated sunflower and a comparison to its wild progenitor, Helianthus annuus L. Theor Appl Genet 123: 693-704.
-
(2011)
Theor Appl Genet
, vol.123
, pp. 693-704
-
-
Mandel, J.R.1
Dechaine, J.M.2
Marek, L.F.3
Burke, J.M.4
-
31
-
-
0000080049
-
The sunflower among the North American Indians
-
Heiser CB, (1951) The sunflower among the North American Indians. P Am Philos Soc 95: 432-448.
-
(1951)
P Am Philos Soc
, vol.95
, pp. 432-448
-
-
Heiser, C.B.1
-
32
-
-
0001794351
-
Hopi crop diversity and change
-
Soleri D, Cleveland D, (1993) Hopi crop diversity and change. J Ethnobiol 13: 203-231.
-
(1993)
J Ethnobiol
, vol.13
, pp. 203-231
-
-
Soleri, D.1
Cleveland, D.2
-
33
-
-
85103046475
-
Early history of sunflower
-
In: Scheiter AA, editors, Madison, WI, American Society Agronomy
-
Putt ED, (1997) Early history of sunflower. In: Scheiter AA, editors. Sunflower Production and Technology Madison, WI American Society Agronomy pp. 1-19.
-
(1997)
Sunflower Production and Technology
, pp. 1-19
-
-
Putt, E.D.1
|