Complex quantum network model of energy transfer in photosynthetic complexes

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 86, Issue 6, 2012, Pages

  Ai, Bao Quan ^a   Zhu, Shi Liang ^a  

^a SOUTH CHINA NORMAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

HOPPING TERMS; MULTIPLE PATHWAYS; OPTIMAL SPACE; PHASE COHERENCE; PHASE FACTOR; PHASE REGION; QUANTUM INTERFERENCE; QUANTUM NETWORK; QUANTUM PHASE; QUANTUM PHASIS; SPACE STRUCTURE; TRANSFER EFFICIENCY;

EFFICIENCY; ENERGY TRANSFER; OPTIMIZATION;

QUANTUM THEORY;

EID: 84871893822     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.86.061917     Document Type: Article

References (56)

1. G. D. Scholes, G. R. Fleming, A. Olaya-Castro, and R. V. Grondelle, Nat. Chem. 1755-4330 10.1038/nchem.1145 3, 763 (2011);
2. Y. C. Cheng and G. R. Fleming, Annu. Rev. Phys. Chem. ARPLAP 0066-426X 10.1146/annurev.physchem.040808.090259 60, 241 (2009).
3. R. V. Grondelle and V. I. Novoderezhkin, Nature (London) NATUAS 0028-0836 10.1038/463614a 463, 614 (2010);
4. R. V. Grondelle, J. P. Dekker, T. Gillbro, and V. Sundstrom, Biochim. Biophys. Acta 0005-2728 10.1016/0005-2728(94)90166-X 1187, 1 (1994). (Pubitemid 24262887)
5. M. K. Sener, J. D. Olsen, C. N. Hunter, and K. Schulten, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.0706861104 104, 15723 (2007). (Pubitemid 350035367)
6. G. S. Engel, T. R. Calhoun, E. L. Read, T. K. Ahn, T. Manal, Y. C. Cheng, R. E. Blankenship, and G. R. Fleming, Nature (London) NATUAS 0028-0836 10.1038/nature05678 446, 782 (2007). (Pubitemid 46582029)
7. H. Lee, Y. C. Cheng, and G. R. Fleming, Science SCIEAS 0036-8075 10.1126/science.1142188 316, 1462 (2007). (Pubitemid 46906609)
8. E. Collini, C. Y. Wong, K. E. Wilk, P. M. G. Curmi, P. Brumer, and G. D. Scholes, Nature (London) NATUAS 0028-0836 10.1038/nature08811 463, 644 (2010).
9. G. Panitchayangkoona, D. Hayesa, K. A. Fransteda, J. R. Carama, E. Harela, J. Wenb, R. E. Blankenshipb, and G. S. Engel, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.1005484107 107, 12766 (2010).
10. M. B. Plenio and S. F. Huelga, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/10/11/113019 10, 113019 (2008);
11. M. Mohseni, P. Rebentrost, S. Lloyd, and A. Aspuru-Guzik, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3002335 129, 174106 (2008).
12. S. Hoyer, M. Sarovar, and K. B. Whaley, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/12/6/065041 12, 065041 (2010);
13. F. Fassioli and A. Olaya-Castro, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/12/8/085006 12, 085006 (2010).
14. F. Caruso, A. W. Chin, A. Datta, S. F. Huelga, and M. B. Plenio, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3223548 131, 105106 (2009);
15. F. Caruso, S. Montangero, T. Calarco, S. F. Huelga, and M. B. Plenio, Phys. Rev. A PLRAAN 1050-2947 10.1103/PhysRevA.85.042331 85, 042331 (2012).
16. A. W. Chin, A. Datta, F. Caruso, S. F. Huelga, and M. B. Plenio, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/12/6/065002 12, 065002 (2010).
17. G. Panitchayangkoon, D. Hayes, K. A. Fransted, J. R. Caram, E. Harel, J. Wen, R. E. Blankenship, and G. S. Engel, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.1005484107 107, 12766 (2010).
18. Y. C. Cheng and R. J. Silbey, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.96.028103 96, 028103 (2006). (Pubitemid 43248297)
19. A. Nazir, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.103. 146404 103, 146404 (2009).
20. T. R. Calhoun, N. S. Ginsberg, G. S. Schlau-Cohen, Y. C. Cheng, M. Ballottari, R. Bassi, and G. R. Fleming, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp908300c 113, 16291 (2009).
21. P. Rebentrost, M. Mohseni, I. Kassal, S. Lloyd, and A. Aspuru-Guzik, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/11/3/033003 11, 033003 (2009);
22. P. Rebentrost, M. Mohseni, and A. Aspuru-Guzik, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp901724d 113, 9942 (2009).
23. L. James, R. Junghee, L. Changhyoup, Y. Seokwon, J. Hyunseok, and L. Jinhyoung, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/13/10/103002 13, 103002 (2011).
24. B. Cui, X. X. Yi, and C. H. Oh, J. Phys. B: At. Mol. Opt. Phys. JPAPEH 0953-4075 10.1088/0953-4075/45/8/085501 45, 085501 (2012);
25. B. Cui, X. Y. Zhang, and X. X. Yi, arXiv: 1106.4429.
26. A. K. Ringsmuth, G. J. Milburn, and T. M. Stace, Nat. Phys. 1745-2473 10.1038/nphys2332 8, 562 (2012).
27. T. Scholak, F. de Melo, T. Wellens, F. Mintert, and A. Buchleitner, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.83.021912 83, 021912 (2011).
28. M. Sarovar, A. Ishizaki, G. R. Fleming, and K. Birgitta Whaley, Nat. Phys. 1745-2473 10.1038/nphys1652 6, 462 (2010);
29. A. Ishizaki and G. R. Fleming, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.0908989106 106, 17255 (2009).
30. A. Ishizaki and G. R. Fleming, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3155372 130, 234111 (2009).
31. S. Yang, D. Z. Xu, Z. Song, and C. P. Sun, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3435213 132, 234501 (2011);
32. J. Q. Liao, J. F. Huang, L. M. Kuang, and C. P. Sun, Phys. Rev. A PLRAAN 1050-2947 10.1103/PhysRevA.82.052109 82, 052109 (2010);
33. H. Dong, D.-Z. Xu, J.-F. Huang, and C.-P. Sun, Light: Sci. Appl. 2047-7538 10.1038/lsa.2012.2 1, e2 (2012).
34. P. K. Ghosh, A. Y. Smirnov, and F. Nori, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3600341 134, 244103 (2011).
35. J. S. Cao, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.474670 107, 3204 (1997);
36. J. L. Wu, F. Liu, Y. Shen, J. S. Cao, and R. J. Silbey, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/12/10/105012 12, 105012 (2010);
37. J. Ye, K. Sun, Y. Zhao, Y. Yu, C. K. Lee, and J. S. Cao, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.4729786 136, 245104 (2012).
38. J. Prior, A. W. Chin, S. F. Huelga, and M. B. Plenio, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.105.050404 105, 050404 (2010).
39. X. T. Liang, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.82.051918 82, 051918 (2010);
40. X. T. Liang, W. M. Zhang, and Y. Z. Zhuo, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.81.011906 81, 011906 (2010).
41. B. Q. Ai and S. L. Zhu, arXiv: 1201.1740.
42. Y. Y. Jing, R. H. Zheng, H. X. Li, and Q. Shi, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp209575q 116, 1164 (2012);
43. P. K. Ghosh, A. Y. Smirnov, and F. Nori, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3600341 134, 244103 (2011);
44. P. K. Ghosh, A. Y. Smirnov, and F. Nori, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3170939 131, 035102 (2009);
45. G. Ritschel, J. Roden, W. T. Strunz, and A. Eisfeld, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/13/11/113034 13, 113034 (2011).
46. J. S. Cao and R. J. Silbey, J. Phys. Chem. A JPCAFH 1089-5639 10.1021/jp9032589 113, 13825 (2009);
47. A. Kelly and Y. M. Rhee, J. Phys. Chem. Lett. 1948-7185 10.1021/jz200059t 2, 808 (2011).
48. N. Christensson, H. F. Kauffmann, T. Pullerits, and T. Mancal, J. Phys. Chem. B 1520-6106 10.1021/jp304649c 116, 7449 (2012);
49. A. W. Chin, J. Prior, R. Rosenbach, F. Caycedo-Soler, S. F. Huelga, and M. B. Plenio, arXiv: 1203.0776.
50. For a review, see S. Gnutzman and U. Smilansky, Adv. Phys. ADPHAH 0001-8732 10.1080/00018730600908042 55, 527 (2006). (Pubitemid 44773296)
51. A. Ben-Shem, F. Frolow, and N. Nelson, FEBS Lett. FEBLAL 0014-5793 10.1016/S0014-5793(04)00360-6 564, 274 (2004); (Pubitemid 38520933)
52. J. Wen, H. Zhang, M. L. Gross, and R. E. Blankenship, Biochemistry 0006-2960 10.1021/bi200239k 50, 3502 (2011);
53. D. E. Tronrud, J. Wen, L. Gay, and R. E. Blankenship, Photosynth. Res. PHRSDI 0166-8595 10.1007/s11120-009-9430-6 100, 79 (2009);
54. M. Schmidt Busch, F. Muh, M. El-Amine Madjet, and T. Renger, J. Phys. Chem. Lett. 1948-7185 10.1021/jz101541b 2, 93 (2011).
55. J. Adolphs and T. Renger, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.105.079483 91, 2778 (2006). (Pubitemid 44526469)
56. X. X. Yi, X. Y. Zhang, and C. H. Oh, arXiv: 1208.4671.