Detection of VR-2332 strain of porcine reproductive and respiratory syndrome virus type II using an aptamer-based sandwich-type assay

Analytical Chemistry

Volumn 85, Issue 1, 2013, Pages 66-74

  Lee, Su Jin ^a   Kwon, Young Seop ^a   Lee, Ji Eun ^a   Choi, Eun Jin ^b   Lee, Chang Hee ^b   Song, Jae Young ^b   Gu, Man Bock ^a  

^a Korea University   (South Korea)

^b Animal Plant and Fisheries Quarantine and Inspection Agency   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ALTERNATIVE METHODS; APTAMERS; ASSAY METHODS; DETECTION LIMITS; ECONOMIC IMPACTS; HIGH SPECIFICITY; PCR-BASED DETECTION; SINGLE-STRANDED DNA; TYPE II;

DNA; POLYMERASE CHAIN REACTION; SURFACE PLASMON RESONANCE; VIRUSES;

CHEMICAL DETECTION;

APTAMER; MONOCLONAL ANTIBODY; SINGLE STRANDED DNA; VIRUS RNA;

ANIMAL; ARTERIVIRUS; ARTICLE; BLOOD; CHEMISTRY; ENZYME LINKED IMMUNOSORBENT ASSAY; EQUIPMENT; GENETICS; IMMUNOLOGY; ISOLATION AND PURIFICATION; NUCLEOTIDE SEQUENCE; PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME; SURFACE PLASMON RESONANCE; SWINE; VIROLOGY;

ANIMALS; ANTIBODIES, MONOCLONAL; APTAMERS, NUCLEOTIDE; BASE SEQUENCE; DNA, SINGLE-STRANDED; IMMUNOSORBENT TECHNIQUES; PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME; PORCINE RESPIRATORY AND REPRODUCTIVE SYNDROME VIRUS; RNA, VIRAL; SURFACE PLASMON RESONANCE; SWINE;

EID: 84871736815     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac3026866     Document Type: Article

References (46)

1. Tian, H.; Wu, J.; Shang, Y.; Cheng, Y.; Liu, X. Virol. J. 2010, 7, 90
2. Song, S. P.; Wang, L. H.; Li, J.; Zhao, J. L.; Fan, C. H. TrAC, Trends Anal. Chem. 2008, 27, 108-117
3. Fetzer, C.; Pesch, S.; Ohlinger, V. F. Vet. Microbiol. 2006, 115, 21-31
4. Nelsen, C. J.; Murtaugh, M. P.; Faaberg, K. S. J. Virol. 1999, 73, 270-280
5. Nelson, E. A.; Christopher-Hennings, J.; Drew, T.; Wensvoort, G.; Collins, J. E.; Benfield, D. A. J. Clin. Microbiol. 1993, 31, 3184-3189
6. Song, J. Y.; Lee, C. H.; Choi, E. J.; Kim, K.; Yoon, J. Y. J. Virol. Methods 2011, 178, 31-38
7. Yoon, K. J.; Zimmerman, J. J.; Chan, C. C.; Cancel-Tirado, S.; Harmon, K. M.; McGinley, M. J. Vet. Res. 1999, 30, 629-638
8. Balka, G.; Hornyak, A.; Balint, A.; Benyeda, Z.; Rusvai, M. J. Virol. Methods 2009, 158, 41-45
9. Chung, H. K.; Choi, C.; Kim, J.; Chae, C. J. Vet. Diagn. Invest. 2002, 14, 56-60
10. Li, Q.; Zhou, Q. F.; Xue, C. Y.; Ma, J. Y.; Zhu, D. Z.; Cao, Y. C. J. Virol. Methods 2009, 155, 55-60
11. Christopher-Hennings, J.; Faaberg, K. S.; Murtaugh, M. P.; Nelson, E. A.; Roof, M. B.; Vaughn, E. M.; Yoon, K. J.; Zimmerman, J. J. J. Swine Health Prod. 2002, 10, 213-218
12. Mengeling, W. L.; Lager, K. M. Vet. Res. 2000, 31, 61-69
13. Stoltenburg, R.; Reinemann, C.; Strehlitz, B. Anal. Bioanal. Chem. 2005, 383, 83-91
14. Lee, S. J.; Youn, B. S.; Park, J. W.; Niazi, J. H.; Kim, Y. S.; Gu, M. B. Anal. Chem. 2008, 80, 2867-2873
15. Wilson, D. S.; Szostak, J. W. Annu. Rev. Biochem. 1999, 68, 611-647
16. Irvine, D.; Tuerk, C.; Gold, L. J. Mol. Biol. 1991, 222, 739-761
17. Willner, I.; Zayats, M. Angew. Chem., Int. Ed. 2007, 46, 6408-6418
18. Niazi, J. H.; Lee, S. J.; Gu, M. B. Bioorg. Med. Chem. 2008, 16, 7245-7253
19. Gopinath, S. C. B.; Misono, T. S.; Kawasaki, K.; Mizuno, T.; Imai, M.; Odagiri, T.; Kumar, P. K. R. J. Gen. Virol. 2006, 87, 479-487
20. Shangguan, D. H.; Meng, L.; Cao, Z. H. C.; Xiao, Z. Y.; Fang, X. H.; Li, Y.; Cardona, D.; Witek, R. P.; Liu, C.; Tan, W. H. Anal. Chem. 2008, 80, 721-728
21. Kubik, M. F.; Stephens, A. W.; Schneider, D.; Marlar, R. A.; Tasset, D. Nucleic Acids Res. 1994, 22, 2619-2626
22. Brody, E. N. Anticancer Res. 2008, 28, 3220-3220
23. Chaloin, L.; Lehmann, M. J.; Sczakiel, G.; Restle, T. Nucleic Acids Res. 2002, 30, 4001-4008
24. Lu, Y.; Liu, J. Nat. Protoc. 2006, 1, 246-252
25. James, W. J. Gen. Virol. 2007, 88, 351-364
26. Khati, M.; Schuman, M.; Ibrahim, J.; Sattentau, Q.; Gordon, S.; James, W. J. Virol. 2003, 77, 12692-12698
27. Jang, K. J.; Lee, N. R.; Yeo, W. S.; Jeong, Y. J.; Kim, D. E. Biochem. Biophys. Res. Commun. 2008, 366, 738-744
28. Fukuda, K.; Vishnuvardhan, D.; Sekiya, S.; Hwang, J.; Kakiuchi, N.; Kazunari, T.; Shimotohno, K.; Kumar, P. K. R.; Nishikawa, S. Eur. J. Biochem. 2000, 267, 3685-3694
29. Yamamoto, R.; Katahira, M.; Nishikawa, S.; Baba, T.; Taira, K.; Kumar, P. K. R. Genes Cells 2000, 5, 371-388
30. Ahn, D. G.; Jeon, I. J.; Kim, J. D.; Song, M. S.; Han, S. R.; Lee, S. W.; Jung, H.; Oh, J. W. Analyst 2009, 134, 1896-1901
31. Jang, K. J.; Lee, N. R.; Yeo, W. S.; Jeong, Y. J.; Kim, D. E. Biochem. Biophys. Res. Commun. 2008, 366, 738-744
32. Jeon, S. H.; Kayhan, B.; Ben-Yedidia, T.; Arnon, R. J. Biol. Chem. 2004, 279, 48410-48419
33. Gopinath, S. C. B.; Sakamaki, Y.; Kawasaki, K.; Kumar, P. K. R. J. Biochem. 2006, 139, 837-846
34. Darfeuille, F.; Arzumanov, A.; Gait, M. J.; Di Primo, C.; Toulme, J. J. Biochemistry-Us 2002, 41, 12186-12192
35. Reed, M. Am. J. Epidemiol 1938, 27, 493-497
36. Swenson, S. L. F. P. L.; Olsen, C. W. OIE Terrestrial Manual; OIE: Paris, France, 2010.
37. Wasilk, A.; Callahan, J. D.; Christopher-Hennings, J.; Gay, T. A.; Fang, Y.; Dammen, M.; Reos, M. E.; Torremorell, M.; Polson, D.; Mellencamp, M.; Nelson, E.; Nelson, W. M. J. Clin. Microbiol. 2004, 42, 4453-4461
38. Lee, S. J.; P., J.-W.; Kim, I.-A.; Youn, B.-S.; Gu, M. B. Sens. Actuators, B 2012, 168, 243-248
39. Torres-Chavolla, E.; Alocilja, E. C. Biosens. Bioelectron. 2009, 24, 3175-3182
40. Kikin, O.; D'Antonio, L.; Bagga, P. S. Nucleic Acids Res. 2006, 34, W676-W682
41. Teramura, Y.; Arima, Y.; Iwata, H. Anal. Biochem. 2006, 357, 208-215
42. Pultar, J.; Sauer, U.; Domnanich, P.; Preininger, C. Biosens. Bioelectron. 2009, 24, 1456-1461
43. Chen, M. P.; Chung, F. M.; Chang, D. M.; Tsai, J. C. R.; Huang, H. F.; Shin, S. J.; Lee, Y. J. J. Clin. Endocr. Metab. 2006, 91, 295-299
44. van Rijn, P. A.; Wellenberg, G. J.; Hakze-van der Honing, R.; Jacobs, L.; Moonen, P. L.; Feitsma, H. J. Virol. Methods 2004, 120, 151-160
45. Kleiboeker, S. B.; Schommer, S. K.; Lee, S. M.; Watkins, S.; Chittick, W.; Polson, D. J. Vet. Diagn. Invest. 2005, 17, 165-170
46. Legeay, O.; Bounaix, S.; Denis, M.; Arnauld, C.; Hutet, E.; Cariolet, R.; Albina, E.; Jestin, A. J. Virol. Methods 1997, 68, 65-80