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Volumn 78, Issue , 2013, Pages 211-220

The sarcoplasmic fish proteome: Pathways, metabolic networks and potential bioactive peptides for nutritional inferences

Author keywords

Functional networks; Mass spectrometry; Nutrition; Proteomics; Sarcoplasmic fish proteome; Seafood

Indexed keywords

PEPTIDE; PROTEOME;

EID: 84871731025     PISSN: 18743919     EISSN: 18767737     Source Type: Journal    
DOI: 10.1016/j.jprot.2012.11.016     Document Type: Article
Times cited : (51)

References (30)
  • 2
    • 0035805255 scopus 로고    scopus 로고
    • Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
    • Ideker T., Thorsson V., Ranish J., Christmas R., Buhler J., Eng J., et al. Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science 2001, 292(5518):929-934.
    • (2001) Science , vol.292 , Issue.5518 , pp. 929-934
    • Ideker, T.1    Thorsson, V.2    Ranish, J.3    Christmas, R.4    Buhler, J.5    Eng, J.6
  • 3
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold R., Mann M. Mass spectrometry-based proteomics. Nature 2003, 422(6928):198-207.
    • (2003) Nature , vol.422 , Issue.6928 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 4
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng J.K., McCormack A.L., Yates J.R. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J Am Soc Mass Spectrom 1994, 5(11):976-989.
    • (1994) J Am Soc Mass Spectrom , vol.5 , Issue.11 , pp. 976-989
    • Eng, J.K.1    McCormack, A.L.2    Yates, J.R.3
  • 5
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller A., Nesvizhskii A.I., Kolker E., Aebersold T. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal Chem 2002, 74(20):5383-5392.
    • (2002) Anal Chem , vol.74 , Issue.20 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, T.4
  • 6
    • 24644503098 scopus 로고    scopus 로고
    • Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research
    • Conesa A., Götz S., Garcia-Gomez J.M., Terol J., Talon M., Robles M. Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 2005, 21(18):3674-3676.
    • (2005) Bioinformatics , vol.21 , Issue.18 , pp. 3674-3676
    • Conesa, A.1    Götz, S.2    Garcia-Gomez, J.M.3    Terol, J.4    Talon, M.5    Robles, M.6
  • 7
    • 0242490780 scopus 로고    scopus 로고
    • Cytoscape: a software environment for integrated models of biomolecular interaction networks
    • Shannon P., Markiel A., Ozier O., Baliga N.S., Wang J.T., Ramage D., et al. Cytoscape: a software environment for integrated models of biomolecular interaction networks. Genome Res 2003, 13(11):2498-2504.
    • (2003) Genome Res , vol.13 , Issue.11 , pp. 2498-2504
    • Shannon, P.1    Markiel, A.2    Ozier, O.3    Baliga, N.S.4    Wang, J.T.5    Ramage, D.6
  • 11
    • 79951640840 scopus 로고    scopus 로고
    • The bovine milk proteome: cherishing, nourishing and fostering molecular complexity. An interactomics and functional overview
    • D'Alessandro A., Zolla L., Scaloni A. The bovine milk proteome: cherishing, nourishing and fostering molecular complexity. An interactomics and functional overview. Mol Biosyst 2011, 7(3):579-597.
    • (2011) Mol Biosyst , vol.7 , Issue.3 , pp. 579-597
    • D'Alessandro, A.1    Zolla, L.2    Scaloni, A.3
  • 12
    • 0028526562 scopus 로고
    • Enzymatic production of protein by hydrolysates for food use
    • Lahl W.L., Braun S.D. Enzymatic production of protein by hydrolysates for food use. Food Technol 1994, 48(10):68-71.
    • (1994) Food Technol , vol.48 , Issue.10 , pp. 68-71
    • Lahl, W.L.1    Braun, S.D.2
  • 15
    • 84862189137 scopus 로고    scopus 로고
    • Mass spectrometry for nutritional peptidomics: how to analyze food bioactives and their health effects
    • Panchaud A., Affolter M., Kussmann M. Mass spectrometry for nutritional peptidomics: how to analyze food bioactives and their health effects. J Proteomics 2012, 75(12):3546-3559.
    • (2012) J Proteomics , vol.75 , Issue.12 , pp. 3546-3559
    • Panchaud, A.1    Affolter, M.2    Kussmann, M.3
  • 17
    • 0000379923 scopus 로고
    • Characterization and study of sarcoplasmic proteins
    • Univ. of Wisconsin Press, Madison, Wis, E.J. Briskey, R.G. Cassens, B.B. Marsh (Eds.)
    • Scopes R.K. Characterization and study of sarcoplasmic proteins. Physiology and biochemistry of muscle as food 1970, 471-492. Univ. of Wisconsin Press, Madison, Wis. E.J. Briskey, R.G. Cassens, B.B. Marsh (Eds.).
    • (1970) Physiology and biochemistry of muscle as food , pp. 471-492
    • Scopes, R.K.1
  • 18
    • 84871737166 scopus 로고    scopus 로고
    • Potentiality of fish sarcoplasmic proteins as a functional protein ingredient
    • BITEC Bangna, Bangkok, Thailand
    • Yongsawatdigul J., Siriangkanakun S., Hemung B.O. Potentiality of fish sarcoplasmic proteins as a functional protein ingredient. The 12th ASEAN Food Conference 2011 2011, BITEC Bangna, Bangkok, Thailand.
    • (2011) The 12th ASEAN Food Conference 2011
    • Yongsawatdigul, J.1    Siriangkanakun, S.2    Hemung, B.O.3
  • 19
    • 33749590936 scopus 로고    scopus 로고
    • Identification of comercial hake and grenadier species by proteomic analysis of the parvalbumin fraction
    • Carrera M., Cañas B., Piñeiro C., Vázquez J., Gallardo J.M. Identification of comercial hake and grenadier species by proteomic analysis of the parvalbumin fraction. Proteomics 2006, 6(19):5278-5287.
    • (2006) Proteomics , vol.6 , Issue.19 , pp. 5278-5287
    • Carrera, M.1    Cañas, B.2    Piñeiro, C.3    Vázquez, J.4    Gallardo, J.M.5
  • 20
    • 33746930864 scopus 로고    scopus 로고
    • A uniform proteomics MS/MS analysis platform utilizing open XML file formats
    • [2005.0017]
    • Keller A., Eng J., Zhang N., Li X.J., Aebersold R. A uniform proteomics MS/MS analysis platform utilizing open XML file formats. Mol Syst Biol 2005, 1. [2005.0017].
    • (2005) Mol Syst Biol , vol.1
    • Keller, A.1    Eng, J.2    Zhang, N.3    Li, X.J.4    Aebersold, R.5
  • 21
    • 78651364359 scopus 로고    scopus 로고
    • ZFIN: enhancements and updates to the zebrafish model organism database
    • Bradford Y., Conlin T., Dunn N., Fashena D., Frazer K., Howe D.G., et al. ZFIN: enhancements and updates to the zebrafish model organism database. Nucleic Acids Res 2011, 39(Suppl. 1):D822-D829.
    • (2011) Nucleic Acids Res , vol.39 , Issue.SUPPL. 1
    • Bradford, Y.1    Conlin, T.2    Dunn, N.3    Fashena, D.4    Frazer, K.5    Howe, D.G.6
  • 22
    • 78651324347 scopus 로고    scopus 로고
    • The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
    • Szklarczyk D., Franceschini A., Kuhn M., Simonovic M., Roth A., Minguez P., et al. The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored. Nucleic Acids Res 2011, 39:D561-D568.
    • (2011) Nucleic Acids Res , vol.39
    • Szklarczyk, D.1    Franceschini, A.2    Kuhn, M.3    Simonovic, M.4    Roth, A.5    Minguez, P.6
  • 23
    • 80053937952 scopus 로고    scopus 로고
    • SCLpred: protein subcellular localization prediction by N-to-1 neural networks
    • Mooney C., Wang Y.H., Pollastri G. SCLpred: protein subcellular localization prediction by N-to-1 neural networks. Bioinformatics 2011, 27(20):2812-2819.
    • (2011) Bioinformatics , vol.27 , Issue.20 , pp. 2812-2819
    • Mooney, C.1    Wang, Y.H.2    Pollastri, G.3
  • 24
    • 84861660361 scopus 로고    scopus 로고
    • Rapid direct detection of the major fish allergen, parvalbumin, by selected MS/MS ion monitoring mass spectrometry
    • Carrera M., Cañas B., Gallardo J.M. Rapid direct detection of the major fish allergen, parvalbumin, by selected MS/MS ion monitoring mass spectrometry. J Proteomics 2012, 75(11):3211-3220.
    • (2012) J Proteomics , vol.75 , Issue.11 , pp. 3211-3220
    • Carrera, M.1    Cañas, B.2    Gallardo, J.M.3
  • 26
    • 0020328821 scopus 로고
    • Calcium-binding protein parvalbumin is associated with fast contracting muscle fibres
    • Celio M.R., Heizmann C.W. Calcium-binding protein parvalbumin is associated with fast contracting muscle fibres. Nature 1982, 297(5866):504-506.
    • (1982) Nature , vol.297 , Issue.5866 , pp. 504-506
    • Celio, M.R.1    Heizmann, C.W.2
  • 27
    • 0016814965 scopus 로고
    • The primary structure of allergen M from cod
    • Elsayed S., Bennich H. The primary structure of allergen M from cod. Scand J Immunol 1975, 4(2):203-208.
    • (1975) Scand J Immunol , vol.4 , Issue.2 , pp. 203-208
    • Elsayed, S.1    Bennich, H.2
  • 28
    • 33747503962 scopus 로고    scopus 로고
    • Bioactive peptides: production and functionality
    • Korhonen H., Pihlanto A. Bioactive peptides: production and functionality. Int Dairy J 2006, 16(9):945-960.
    • (2006) Int Dairy J , vol.16 , Issue.9 , pp. 945-960
    • Korhonen, H.1    Pihlanto, A.2
  • 29
    • 33644818932 scopus 로고    scopus 로고
    • Mimotopes identify conformational epitopes on parvalbumin, the major fish allergen
    • Untersmayr E., Szalai K., Riemer A.B., Hemmer W., Swoboda I., Hantusch B., et al. Mimotopes identify conformational epitopes on parvalbumin, the major fish allergen. Mol Immunol 2006, 43(9):1454-1461.
    • (2006) Mol Immunol , vol.43 , Issue.9 , pp. 1454-1461
    • Untersmayr, E.1    Szalai, K.2    Riemer, A.B.3    Hemmer, W.4    Swoboda, I.5    Hantusch, B.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.