Reversible optical control of cyanine fluorescence in fixed and living cells: Optical lock-in detection immunofluorescence imaging microscopy

Philosophical Transactions of the Royal Society B: Biological Sciences

Volumn 368, Issue 1611, 2013, Pages

  Yan, Yuling ^a   Petchprayoon, Chutima ^b   Mao, Shu ^b   Marriott, Gerard ^b  

^a Department of Computer Science and Engineering   (United States)

^b University of California   (United States)

Author keywords

High contrast fluorescence imaging; Optical lock in detection; Optical switches

Indexed keywords

ANTIBODY; ANTIGEN; DETECTION METHOD; FLUORESCENCE; IMAGING METHOD; OPTICAL METHOD; PIGMENT; PROBE; PROTEIN;

ACTIN; ANTIBODY; BENZOPYRAN DERIVATIVE; BETA 2 ADRENERGIC RECEPTOR; FLUORESCENT DYE; INDOLE DERIVATIVE; MEROCYANINE; OXAZINE DERIVATIVE; SPIRO COMPOUND; SPIRONAPHTHOXAZINE;

ANIMAL; ARTICLE; CELL STRAIN 3T3; CHEMICAL STRUCTURE; CHEMISTRY; FIBROBLAST; FLUORESCENCE; FLUORESCENCE IMAGING; FLUORESCENCE MICROSCOPY; FLUORESCENCE RESONANCE ENERGY TRANSFER; METHODOLOGY; MOUSE; STAINING;

ACTINS; ANIMALS; ANTIBODIES; BENZOPYRANS; FIBROBLASTS; FLUORESCENCE; FLUORESCENCE RESONANCE ENERGY TRANSFER; FLUORESCENT DYES; INDOLES; MICE; MICROSCOPY, FLUORESCENCE; MOLECULAR STRUCTURE; NIH 3T3 CELLS; OPTICAL IMAGING; OXAZINES; RECEPTORS, ADRENERGIC, BETA-2; SPIRO COMPOUNDS; STAINING AND LABELING;

EID: 84871676170     PISSN: 09628436     EISSN: 14712970     Source Type: Journal    
DOI: 10.1098/rstb.2012.0031     Document Type: Article

References (30)

1. Giepmans BNG, Adams SR, Ellisman MH, Tsien RY. (2006). The fluorescent toolbox for assessing protein location and function. Science 312, 217-224. (doi:10.1126/science.1124618)
2. Theriot JA, Mitchison TJ. (1991). Actin microfilament dynamics in locomoting cells. Nature 352, 126-131. (doi:10.1038/352126a0)
3. Yan Y, Marriott G. (2003). Analysis of protein interactions using fluorescence technologies. Curr. Opin. Chem. Biol. 7, 1-6. (doi:10.1016/S1367-5931(03)00002-4)
4. Hell SW, Dyba M, Jakobs S. (2004). Concepts for nanoscale resolution in fluorescence microscopy. Curr. Opin. Neurobiol. 14, 599-609. (doi:10.1016/j. conb.2004.08.015)
5. Zhuang X. (2009). Nano-imaging with STORM. Nat. Photon. 3, 365-367. (doi:10.1038/nphoton.2009.101)
6. Yan Y, Marriott ME, Petchprayoon C, Marriott G. (2011). Optical switch probes and optical lock-in detection (OLID) imaging microscopy: high-contrast fluorescence imaging within living systems. Biochem. J. 433, 411-422. (doi:10.1042/BJ20100992)
7. Hell SW, Wichmann J. (1994). Breaking the diffraction resolution limit by stimulated emission: stimulated emission depletion microscopy. Opt. Lett. 19, 780-782. (doi:10.1364/OL.19.000780)
8. Hoffmann M, Eggeling C, Jakobs S, Hell SW. (2005). Breaking the diffraction barrier in fluorescence microscopy at low light intensities by using reversibly photoswitchable proteins. Proc. Natl Acad. Sci. USA 102, 17 565-17 569. (doi:10.1073/pnas. 0506010102)
9. Betzig E, Patterson GH, Sougrat R, Lindwasser OW, Olenych S, Bonifacino JS, Davidson MW, Lippincott-Schwartz J, Hess HF. (2006). Imaging intracellular fluorescent proteins at nanometer resolution. Science 313, 1642-1645. (doi:10.1126/science. 1127344)
10. Rust MJ, Bates M, Zhuang X. (2006). Sub-diffractionlimit imaging by stochastic optical reconstruction microscopy (STORM). Nat. Methods 3, 793-796. (doi:10.1038/nmeth929)
11. Richards CI, Hsiang JC, Dickson RM. (2010). Synchronously amplified fluorescence image recovery (SAFIRe). J. Phys. Chem. B 114, 660-665. (doi:10.1021/jp909167j)
12. Lippincott-Schwartz J, Patterson GH. (2009). Photoactivatable fluorescent proteins for diffractionlimited and super-resolution imaging. Trends Cell Biol. 19, 555-565. (doi:10.1016/j.tcb.2009.09.003)
13. Aubin JE. (1979). Autofluorescence of viable cultured mammalian cells. J. Histochem. Cytochem. 27, 36-43. (doi:10.1177/27.1.220325)
14. Axelrod D. (2003). Total internal reflection fluorescence microscopy in cell biology. Methods Enzymol. 361, 1-33. (doi:10.1016/S0076-6879(03)61003-7)
15. Marriott G, Mao S, Sakata T, Jackson D, Gomez T, Aaron H, Isacoff EY, Yan Y. (2008). High contrast imaging based on optical lock-in detection imaging of synthetic and genetically encoded optical switches. Proc. Natl Acad. Sci. USA 46, 17 789-17 794. (doi:10.1073/pnas.0808882105)
16. Song L, Jares-Erijman E, Jovin T. (2002). A photochromic acceptor as a reversible light-driven switch in fluorescence resonance energy transfer (FRET). J. Photochem. Photobiol. A 150, 177-185. (doi:10.1016/S1010-6030(02)00129-6)
17. Keppler A, Kindermann M, Gendreizig S, Pick H, Vogel H, Johnsson K. (2004). Labeling of fusion proteins of O6-alkylguanine-DNA alkyltransferase with small molecules in vivo and in vitro. Methods 32, 437-444. (doi:10.1016/j.ymeth.2003.10.007)
18. Sakata T, Yan Y, Marriott G. (2005). Optical switching of dipolar interactions on proteins. Proc. Natl Acad. Sci. USA 102, 4759-4764. (doi:10.1073/pnas. 0405265102)
19. Petchprayoon C, Yan Y, Mao S, Marriott G. (2011). Rational design, synthesis, and characterization of highly fluorescent optical switches for high-contrast optical lock-in detection (OLID) imaging microscopy in living cells. Bioorg. Med. Chem. 19, 1030-1040. (doi:10.1016/j.bmc.2010.07.015)
20. Sakata T, Yan Y, Marriott G. (2005). A family of site selective optical switches. J. Organic Chem. 70, 2009-2013. (doi:10.1021/jo048207o)
21. Mao S, Benninger RKP, Yan Y, Petchprayoon C, Jackson D, Easley CJ, Piston DW, Marriott G. (2008). Optical lock-in detection of FRET using synthetic and genetically encoded optical switches. Biophys. J. 94, 4515-4524. (doi:10.1529/biophysj.107.124859)
22. Wu YI, Frey D, Lungu OI, Jaehrig A, Schlichting I, Kuhlman B, Hahn K. (2009). A genetically encoded photoactivatable Rac controls the motility of living cells. Nature 463, 104-108. (doi:10.1038/nature08241)
23. Choidas A, Jungbluth A, Sechi A, Ullrich A, Marriott G. (1998). The suitability and application of a GFPactin fusion protein for long-term imaging of the organization and dynamics of the cytoskeleton in mammalian cells. Eur. J. Cell Biol. 77, 81-90. (doi:10.1016/S0171-9335(98)80075-7)
24. Kolmakov K, Belov VN, Bierwagen J, Ringemann C, Muller V, Eggeling C, Hell SW. (2010). Red-emitting rhodamine dyes for fluorescence microscopy and nanoscopy. Chem. Eur. J. 16, 158-166. (doi:10. 1002/chem.200902309)
25. Ando R, Flors C, Mizuno H, Hofkens J, Miyawaki A. (2007). Highlighted generation of fluorescence signals using simultaneous two-color irradiation on Dronpa mutants. Biophys. J. 92, 97-99. (doi:10.1529/biophysj.107.105882)
26. Stiel AC et al. (2008). Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy. Biophys. J. 96, 2989-2997. (doi:10.1529/biophysj.108.130146)
27. Fernandez-Suarez M, Ting AY. (2008). Fluorescent probes for super-resolution imaging in living cells. Nat. Rev. Mol. Cell Biol. 9, 929-943. (doi:10.1038/nrm2531)
28. Hess ST, Gould TJ, Gudheti MV, Maas SA, Mills KD, Zimmerberg J. (2007). Dynamic clustered distribution of hemagglutinin resolved at 40 nm in living cell membranes discriminates between raft theories. Proc. Natl Acad. Sci. USA 104, 17 370-17 375. (doi:10.1073/pnas.0708066104)
29. Shroff H, Galbraith CG, Galbraith JA, Betzig E. (2008). Live-cell photoactivated localization microscopy of nanoscale adhesion dynamics. Nat. Methods 5, 417-423. (doi:10.1038/nmeth.1202)
30. Jones SA, Shim SH, He J, Zhuang X. (2011). Fast, three-dimensional super-resolution imaging of live cells. Nat. Methods 8, 499-508. (doi:10.1038/nmeth.1605)