Comparative Study of the Fatty Acid Binding Process of a New FABP from Cherax quadricarinatus by Fluorescence Intensity, Lifetime and Anisotropy

PLoS ONE

Volumn 7, Issue 12, 2012, Pages

  Li, Jiayao ^a,b   Henry, Etienne ^a   Wang, Lanmei ^b   Delelis, Olivier ^a   Wang, Huan ^a   Simon, Françoise ^a   Tauc, Patrick ^a   Brochon, Jean Claude ^a   Zhao, Yunlong ^b   Deprez, Eric ^a  

^a Ecole Normale Superieure de Cachan   (France)

^b EAST CHINA NORMAL UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

8 ANILINO 1 NAPHTHALENESULFONIC ACID; ARACHIDONIC ACID; CARBON; FATTY ACID; FATTY ACID BINDING PROTEIN; LINOLEIC ACID; OLEIC ACID; PALMITIC ACID; PARINARIC ACID; TRYPTOPHAN;

ANIMAL TISSUE; ANISOTROPY; ARTICLE; BINDING AFFINITY; BINDING SITE; CHERAX QUADRICARINATUS; CONTROLLED STUDY; CRAYFISH; FLUORESCENCE ANALYSIS; FLUORESCENCE RESONANCE ENERGY TRANSFER; HEPATOPANCREAS; MOLECULAR PROBE; NONHUMAN; STEADY STATE;

AMINO ACID SEQUENCE; ANIMAL FEED; ANIMALS; BASE SEQUENCE; DECAPODA (CRUSTACEA); FATTY ACID-BINDING PROTEINS; FATTY ACIDS; FLUORESCENCE POLARIZATION; MOLECULAR SEQUENCE DATA; PROTEIN BINDING;

ASTACOIDEA; CHERAX QUADRICARINATUS; INVERTEBRATA; VERTEBRATA;

EID: 84871351225     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0051079     Document Type: Article

References (64)

1. Esteves A, Ehrlich R, (2006) Invertebrate intracellular fatty acid binding proteins. Comparative Biochemistry and Physiology C-Toxicology & Pharmacology 142: 262-274.
2. Soderhall I, Tangprasittipap A, Liu H, Sritunyalucksana K, Prasertsan P, et al. (2006) Characterization of a hemocyte intracellular fatty acid-binding protein from crayfish (Pacifastacus leniusculus) and shrimp (Penaeus monodon). Febs Journal 273: 2902-2912.
3. Storch J, Thumser AEA, (2000) The fatty acid transport function of fatty acid-binding proteins. Biochimica et Biophysica Acta-Molecular and Cell Biology of Lipids 1486: 28-44.
4. Zimmerman AW, Veerkamp JH, (2002) New insights into the structure and function of fatty acid-binding proteins. Cellular and Molecular Life Sciences 59: 1096-1116.
5. Levin LB, Ganoth A, Amram S, Nachliel E, Gutman M, et al. (2010) Insight into the interaction sites between fatty acid binding proteins and their ligands. Journal of Molecular Modeling 16: 929-938.
6. Jenkins AE, Hockenberry JA, Nguyen T, Bernlohr DA, (2002) Testing of the portal hypothesis: Analysis of a V32G, F57G, K58G mutant of the fatty acid binding protein of the murine adipocyte. Biochemistry 41: 2022-2027.
7. Ockner RK, Manning JA, Poppenhausen RB, Ho WK, (1972) A binding protein for fatty acids in cytosol of intestinal mucosa, liver, myocardium, and other tissues. Science 177: 56-58.
8. Atshaves BP, Martin GG, Hostetler HA, McIntosh AL, Kier AB, et al. (2010) Liver fatty acid-binding protein and obesity. Journal of Nutritional Biochemistry 21: 1015-1032.
9. Storch J, McDermott L, (2009) Structural and functional analysis of fatty acid-binding proteins. Journal of Lipid Research 50: S126-S131.
10. Chmurzynska A, (2006) The multigene family of fatty acid-binding proteins (FABPs): Function, structure and polymorphism. Journal of Applied Genetics 47: 39-48.
11. Yan J, Gong YW, She YM, Wang GQ, Roberts MS, et al. (2009) Molecular mechanism of recombinant liver fatty acid binding protein's antioxidant activity. Journal of Lipid Research 50: 2445-2454.
12. Duplus E, Forest C, (2002) Is there a single mechanism for fatty acid regulation of gene transcription? Biochemical Pharmacology 64: 893-901.
13. Cao HM, Gerhold K, Mayers JR, Wiest MM, Watkins SM, et al. (2008) Identification of a lipokine, a lipid hormone linking adipose tissue to systemic metabolism. Cell 134: 933-944.
14. Guillou H, Zadravec D, Martin PGP, Jacobsson A, (2010) The key roles of elongases and desaturases in mammalian fatty acid metabolism: Insights from transgenic mice. Progress in Lipid Research 49: 186-199.
15. Haunerland NH, Chisholm JM, (1990) Fatty-Acid Binding-Protein in Flight-Muscle of the Locust, Schistocerca-Gregaria. Biochimica et Biophysica Acta 1047: 233-238.
16. Evans JD, Wheeler DE, (1999) Differential gene expression between developing queens and workers in the honey bee, Apis mellifera. Proceedings of the National Academy of Sciences of the United States of America 96: 5575-5580.
17. Gong YN, Li WW, Sun JL, Ren F, He L, et al. (2010) Molecular cloning and tissue expression of the fatty acid-binding protein (Es-FABP) gene in female Chinese mitten crab (Eriocheir sinensis). Bmc Molecular Biology 11.
18. Esteves A, Portillo V, Ehrlich R, (2003) Genomic structure and expression of a gene coding for a new fatty acid binding protein from Echinococcus granulosus. Biochimica et Biophysica Acta-Molecular and Cell Biology of Lipids 1631: 26-34.
19. Jakobsson E, Alvite G, Bergfors T, Esteves A, Kleywegt GJ, (2003) The crystal structure of Echinococcus granulosus fatty-acid-binding protein 1. Biochimica et Biophysica Acta-Proteins and Proteomics 1649: 40-50.
20. Veerkamp JH, van Moerkerk HTB, Prinsen CFM, van Kuppevelt TH, (1999) Structural and functional studies on different human FABP types. Molecular and Cellular Biochemistry 192: 137-142.
21. Gu PL, Gunawardene YINS, Chow BCK, He JG, Chan SM, (2002) Characterization of a novel cellular retinoic acid/retinol binding protein from shrimp: expression of the recombinant protein for immunohistochemical detection and binding assay. Gene 288: 77-84.
22. Folli C, Ramazzina I, Percudani R, Berni R, (2005) Ligand-binding specificity of an invertebrate (Manduca sexta) putative cellular retinoic acid binding protein. Biochimica et Biophysica Acta-Proteins and Proteomics 1747: 229-237.
23. Li JY, Guo ZL, Gan XH, Wang DL, Zhang MF, et al. (2011) Effect of different dietary lipid sources on growth and gonad maturation of pre-adult female Cherax quadricarinatus (von Martens). Aquaculture Nutrition 17: E853-E860.
24. Glatz JF, Veerkamp JH, (1983) A radiochemical procedure for the assay of fatty acid binding by proteins. Anal Biochem 132: 89-95.
25. Mita R, Beaulieu MJ, Field C, Godbout R, (2010) Brain fatty acid-binding protein and omega-3/omega-6 fatty acids: mechanistic insight into malignant glioma cell migration. J Biol Chem 285: 37005-37015.
26. Hohoff C, Borchers T, Rustow B, Spener F, van Tilbeurgh H, (1999) Expression, purification, and crystal structure determination of recombinant human epidermal-type fatty acid binding protein. Biochemistry 38: 12229-12239.
27. Lakowics JR (2006) Principles of Fluorescence Spectroscopy, 3rd Ed., Springer-Verlag New York Inc., New York.
28. Delelis O, Carayon K, Guiot E, Leh H, Tauc P, et al. (2008) Insight into the integrase-DNA recognition mechanism: A specific DNA-binding mode revealed by an enzymatically labeled integrase. J Biol Chem.
29. Deprez E, Tauc P, Leh H, Mouscadet JF, Auclair C, et al. (2001) DNA binding induces dissociation of the multimeric form of HIV-1 integrase: a time-resolved fluorescence anisotropy study. Proc Natl Acad Sci U S A 98: 10090-10095.
30. Deprez E, Tauc P, Leh H, Mouscadet JF, Auclair C, et al. (2000) Oligomeric states of the HIV-1 integrase as measured by time-resolved fluorescence anisotropy. Biochemistry 39: 9275-9284.
31. Guiot E, Carayon K, Delelis O, Simon F, Tauc P, et al. (2006) Relationship between the oligomeric status of HIV-1 integrase on DNA and enzymatic activity. J Biol Chem 281: 22707-22719.
32. Brochon JC, (1994) Maximum entropy method of data analysis in time-resolved spectroscopy. Methods Enzymol 240: 262-311.
33. Kurian E, Kirk WR, Prendergast FG, (1996) Affinity of fatty acid for rRat intestinal fatty acid binding protein: Further examination. Biochemistry 35: 3865-3874.
34. Kane CD, Bernlohr DA, (1996) A simple assay for intracellular lipid-binding proteins using displacement of 1-anilinonaphthalene 8-sulfonic acid. Analytical Biochemistry 233: 197-204.
35. Arnold K, Bordoli L, Kopp J, Schwede T, (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22: 195-201.
36. Sirangelo I, Malmo C, Casillo M, Irace G, (2002) Resolution of tryptophan-ANS fluorescence energy transfer in apomyoglobin by site-directed mutagenesis. Photochemistry and Photobiology 76: 381-384.
37. Zimmerman AW, van Moerkerk HT, Veerkamp JH, (2001) Ligand specificity and conformational stability of human fatty acid-binding proteins. Int J Biochem Cell Biol 33: 865-876.
38. Di Pietro SM, Veerkamp JH, Santome JA, (1999) Isolation, amino acid sequence determination and binding properties of two fatty-acid-binding proteins from axolotl (Ambistoma mexicanum) liver. Evolutionary relationship. Eur J Biochem 259: 127-134.
39. Prinsen CF, Veerkamp JH, (1996) Fatty acid binding and conformational stability of mutants of human muscle fatty acid-binding protein. Biochem J 314 (Pt 1):: 253-260.
40. Thumser AE, Storch J, (2007) Characterization of a BODIPY-labeled fluorescent fatty acid analogue. Binding to fatty acid-binding proteins, intracellular localization, and metabolism. Molecular and Cellular Biochemistry 299: 67-73.
41. Klimtchuk E, Venyaminov S, Kurian E, Wessels W, Kirk W, et al. (2007) Photophysics of ANS. I. Protein-ANS complexes: Intestinal fatty acid binding protein and single-trp mutants. Biophysical Chemistry 125: 1-12.
42. Norris AW, Spector AA, (2002) Very long chain n-3 and n-6 polyunsaturated fatty acids bind strongly to liver fatty acid-binding protein. Journal of Lipid Research 43: 646-653.
43. Velkov T, Chuang S, Wielens J, Sakellaris H, Charman WN, et al. (2005) The interaction of lipophilic drugs with intestinal fatty acid-binding protein. Journal of Biological Chemistry 280: 17769-17776.
44. Matulis D, Lovrien R, (1998) 1-anilino-8-naphthalene sulfonate anion-protein binding depends primarily on ion pair formation. Biophysical Journal 74: 422-429.
45. Chuang S, Velkov T, Horne J, Porter CJ, Scanlon MJ, (2008) Characterization of the drug binding specificity of rat liver fatty acid binding protein. J Med Chem 51: 3755-3764.
46. Velkov T, Chuang S, Prankerd R, Sakellaris H, Porter CJ, et al. (2005) An improved method for the purification of rat liver-type fatty acid binding protein from Escherichia coli. Protein Expr Purif 44: 23-31.
47. Huang H, Starodub O, McIntosh A, Atshaves BP, Woldegiorgis G, et al. (2004) Liver fatty acid-binding protein colocalizes with peroxisome proliferator activated receptor alpha and enhances ligand distribution to nuclei of living cells. Biochemistry 43: 2484-2500.
48. Maatman RG, van Moerkerk HT, Nooren IM, van Zoelen EJ, Veerkamp JH, (1994) Expression of human liver fatty acid-binding protein in Escherichia coli and comparative analysis of its binding characteristics with muscle fatty acid-binding protein. Biochim Biophys Acta 1214: 1-10.
49. Richieri GV, Ogata RT, Kleinfeld AM, (1995) Thermodynamics of fatty acid binding to fatty acid-binding proteins and fatty acid partition between water and membranes measured using the fluorescent probe ADIFAB. J Biol Chem 270: 15076-15084.
50. Richieri GV, Ogata RT, Zimmerman AW, Veerkamp JH, Kleinfeld AM, (2000) Fatty acid binding proteins from different tissues show distinct patterns of fatty acid interactions. Biochemistry 39: 7197-7204.
51. Hanhoff T, Lucke C, Spener F, (2002) Insights into binding of fatty acids by fatty acid binding proteins. Mol Cell Biochem 239: 45-54.
52. Thompson J, Ory J, Reese-Wagoner A, Banaszak L, (1999) The liver fatty acid binding protein-comparison of cavity properties of intracellular lipid-binding proteins. Mol Cell Biochem 192: 9-16.
53. Shechter A, Aflalo ED, Davis C, Sagi A, (2005) Expression of the reproductive female-specific vitellogenin gene in endocrinologically induced male and intersex Cherax quadricarinatus crayfish. Biol Reprod 73: 72-79.
54. Wouters R, Lavens P, Nieto J, Sorgeloos P, (2001) Penaeid shrimp broodstock nutrition: an updated review on research and development. Aquaculture 202: 1-21.
55. Wen XB, Chen LQ, Zhou ZL, Ai CX, Deng GY, (2002) Reproduction response of Chinese mitten-handed crab (Eriocheir sinensis) fed different sources of dietary lipid. Comp Biochem Physiol A Mol Integr Physiol 131: 675-681.
56. Pangantihon-Kühlmann MP, Millamena O, Chern Y, (1998) Effect of dietary astaxanthin and vitamin A on the reproductive performance of Penaeus monodon broodstock. Aquat Living Resour 11: 403-409.
57. Distel RJ, Robinson GS, Spiegelman BM, (1992) Fatty acid regulation of gene expression. Transcriptional and post-transcriptional mechanisms. J Biol Chem 267: 5937-5941.
58. Jump DB, (2002) Dietary polyunsaturated fatty acids and regulation of gene transcription. Curr Opin Lipidol 13: 155-164.
59. Liu RZ, Li X, Godbout R, (2008) A novel fatty acid-binding protein (FABP) gene resulting from tandem gene duplication in mammals: transcription in rat retina and testis. Genomics 92: 436-445.
60. Di Nunzio M, Danesi F, Bordoni A, (2009) n-3 PUFA as regulators of cardiac gene transcription: a new link between PPAR activation and fatty acid composition. Lipids 44: 1073-1079.
61. Motojima K, (2000) Differential effects of PPARalpha activators on induction of ectopic expression of tissue-specific fatty acid binding protein genes in the mouse liver. Int J Biochem Cell Biol 32: 1085-1092.
62. Cheng Y, Du N, Lai W, (1998) Lipid composition in hepatopancreas of Chinese mitten crab Eriocheir sinensis at different stages. Acta Zool Sinica 44: 420-429.
63. Ying X, Yang W, Zhang Y, (2006) Comparative studies on fatty acid composition of the ovaries and hepatopancreas at different physiological stages of the Chinese mitten crab. Aquaculture 256: 617-623.
64. Arnold K, Bordoli L, Kopp J, Schwede T, (2006) The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling. Bioinformatics 22: 195-201.