-
2
-
-
30944444021
-
Sarcomeric proteins and familial hypertrophic cardiomyopathy: linking mutations in structural proteins to complex cardiovascular phenotypes
-
Tardiff JCJ, (2005) Sarcomeric proteins and familial hypertrophic cardiomyopathy: linking mutations in structural proteins to complex cardiovascular phenotypes. Heart Failure Rev 10: 237-248.
-
(2005)
Heart Failure Rev
, vol.10
, pp. 237-248
-
-
Tardiff, J.C.J.1
-
3
-
-
24744463882
-
Mutations in human cardiac Troponin I that are associated with restrictive cardiomyopathy affect basal ATPase activity and the calcium sensitivity of force development
-
Gomes A, Liang J, Potter J, (2005) Mutations in human cardiac Troponin I that are associated with restrictive cardiomyopathy affect basal ATPase activity and the calcium sensitivity of force development. J Biol Chem 280: 30909-30915.
-
(2005)
J Biol Chem
, vol.280
, pp. 30909-30915
-
-
Gomes, A.1
Liang, J.2
Potter, J.3
-
4
-
-
79960564849
-
How Do Mutations in Contractile Proteins Cause the Primary Familial Cardiomyopathies?
-
Marston SB, (2011) How Do Mutations in Contractile Proteins Cause the Primary Familial Cardiomyopathies? J Cardio Trans Res 4: 245-255.
-
(2011)
J Cardio Trans Res
, vol.4
, pp. 245-255
-
-
Marston, S.B.1
-
5
-
-
77649170228
-
Molecular basis of hereditary cardiomyopathy: abnormalities in calcium sensitivity, stretch response, stress response and beyond
-
Kimura A, (2010) Molecular basis of hereditary cardiomyopathy: abnormalities in calcium sensitivity, stretch response, stress response and beyond. J Hum Genet 55: 81-90.
-
(2010)
J Hum Genet
, vol.55
, pp. 81-90
-
-
Kimura, A.1
-
6
-
-
43649089498
-
A novel mutant cardiac troponin C disrupts molecular motions critical for calcium binding affinity and cardiomyocyte contractility
-
Lim CC, Yang H, Yang M, Wang CK, Shi J, et al. (2008) A novel mutant cardiac troponin C disrupts molecular motions critical for calcium binding affinity and cardiomyocyte contractility. Biophys J 94: 3577-3589.
-
(2008)
Biophys J
, vol.94
, pp. 3577-3589
-
-
Lim, C.C.1
Yang, H.2
Yang, M.3
Wang, C.K.4
Shi, J.5
-
7
-
-
0034625062
-
Bepridil opens the regulatory N-terminal lobe of cardiac troponin C
-
Li Y, Love ML, Cohen C 4, (2000) Bepridil opens the regulatory N-terminal lobe of cardiac troponin C. Proc Natl Acad Sci 97: 5140-5145.
-
(2000)
Proc Natl Acad Sci
, vol.97
, pp. 5140-5145
-
-
Li, Y.1
Love, M.L.2
Cohen, C.3
-
8
-
-
77956236251
-
Predicting cardiomyopathic phenotypes by altering the Ca2+ affinity of cardiac troponin C
-
Parvatiyar MS, Pinto JR, Liang J, Potter JD, (2010) Predicting cardiomyopathic phenotypes by altering the Ca2+ affinity of cardiac troponin C. The J Biol Chem 285: 27785-27797.
-
(2010)
The J Biol Chem
, vol.285
, pp. 27785-27797
-
-
Parvatiyar, M.S.1
Pinto, J.R.2
Liang, J.3
Potter, J.D.4
-
9
-
-
67650544956
-
A functional and structural study of troponin C mutations related to hypertrophic cardiomyopathy
-
Pinto J, Parvatiyar M, Jones M, Liang J, Ackerman M, et al. (2009) A functional and structural study of troponin C mutations related to hypertrophic cardiomyopathy. The J Biol Chem 284: 19090.
-
(2009)
The J Biol Chem
, vol.284
, pp. 19090
-
-
Pinto, J.1
Parvatiyar, M.2
Jones, M.3
Liang, J.4
Ackerman, M.5
-
10
-
-
4143085980
-
Designing Calcium-sensitizing Mutations in the Regulatory Domain of Cardiac Troponin C
-
Tikunova SB, Davis J, (2004) Designing Calcium-sensitizing Mutations in the Regulatory Domain of Cardiac Troponin C. J Biol Chem 279: 35341-35352.
-
(2004)
J Biol Chem
, vol.279
, pp. 35341-35352
-
-
Tikunova, S.B.1
Davis, J.2
-
11
-
-
80755181365
-
Visualizing the principal component of 1 H, 15 N-HSQC NMR spectral changes that reflect protein structural or functional properties: application to troponin C
-
Robertson I, Boyko R, Sykes B, (2011) Visualizing the principal component of 1 H, 15 N-HSQC NMR spectral changes that reflect protein structural or functional properties: application to troponin C. J Biomol NMR 51: 115-122.
-
(2011)
J Biomol NMR
, vol.51
, pp. 115-122
-
-
Robertson, I.1
Boyko, R.2
Sykes, B.3
-
12
-
-
0037588762
-
Structure of the core domain of human cardiac troponin in the Ca2+-saturated form
-
Takeda S, Yamashita A, Maeda K, Ma'eda Y, (2003) Structure of the core domain of human cardiac troponin in the Ca2+-saturated form. Nature 424: 35-41.
-
(2003)
Nature
, vol.424
, pp. 35-41
-
-
Takeda, S.1
Yamashita, A.2
Maeda, K.3
Ma'eda, Y.4
-
13
-
-
0035940465
-
Temperature Dependence of Dynamics and Thermodynamics of the Regulatory Domain of Human Cardiac Troponin C
-
Spyracopoulos L, Lavigne P, Crump MP, Gagn'e SM, Kay CM, et al. (2001) Temperature Dependence of Dynamics and Thermodynamics of the Regulatory Domain of Human Cardiac Troponin C. Biochemistry 40: 12541-12551.
-
(2001)
Biochemistry
, vol.40
, pp. 12541-12551
-
-
Spyracopoulos, L.1
Lavigne, P.2
Crump, M.P.3
Gagn'e, S.M.4
Kay, C.M.5
-
14
-
-
0032558982
-
Dynamics and Thermodynamics of the Regulatory Domain of Human Cardiac Troponin C in the Apo- and Calcium-Saturated States
-
Spyracopoulos L, Gagn'e SM, Li MX, Sykes BD, (1998) Dynamics and Thermodynamics of the Regulatory Domain of Human Cardiac Troponin C in the Apo- and Calcium-Saturated States. Biochemistry 37: 18032-18044.
-
(1998)
Biochemistry
, vol.37
, pp. 18032-18044
-
-
Spyracopoulos, L.1
Gagn'e, S.M.2
Li, M.X.3
Sykes, B.D.4
-
15
-
-
0030856717
-
Calcium-Induced Structural Transition in the Regulatory Domain of Human Cardiac Troponin C
-
Spyracopoulos L, Li MX, Sia SK, Gagné SM, Chandra M, et al. (1997) Calcium-Induced Structural Transition in the Regulatory Domain of Human Cardiac Troponin C,. Biochemistry 36: 12138-12146.
-
(1997)
Biochemistry
, vol.36
, pp. 12138-12146
-
-
Spyracopoulos, L.1
Li, M.X.2
Sia, S.K.3
Gagné, S.M.4
Chandra, M.5
-
16
-
-
84860497627
-
Dynamics and Calcium Association to the N-Terminal Regulatory Domain of Human Cardiac Troponin C: A Multiscale Computational Study
-
Lindert S, Kekenes-Huskey PM, Huber G, Pierce L, McCammon JA, (2012) Dynamics and Calcium Association to the N-Terminal Regulatory Domain of Human Cardiac Troponin C: A Multiscale Computational Study. J Phys Chem B 116: 8449-59.
-
(2012)
J Phys Chem B
, vol.116
, pp. 8449-8459
-
-
Lindert, S.1
Kekenes-Huskey, P.M.2
Huber, G.3
Pierce, L.4
McCammon, J.A.5
-
17
-
-
79959405666
-
Molecular Dynamics and Docking Studies on Cardiac Troponin C
-
Varughese JF, Li Y, (2011) Molecular Dynamics and Docking Studies on Cardiac Troponin C. J Biomol Struct Dyn 29: 123-135.
-
(2011)
J Biomol Struct Dyn
, vol.29
, pp. 123-135
-
-
Varughese, J.F.1
Li, Y.2
-
19
-
-
84861857352
-
Structural and functional consequences of the cardiac troponin C L48Q Ca2+-sensitizing mutation
-
Wang D, Robertson I, Li M, McCully M, (2012) Structural and functional consequences of the cardiac troponin C L48Q Ca2+-sensitizing mutation. Biochemistry 51: 4473-87.
-
(2012)
Biochemistry
, vol.51
, pp. 4473-4487
-
-
Wang, D.1
Robertson, I.2
Li, M.3
McCully, M.4
-
20
-
-
0035935802
-
Calculating free energies using average force
-
Darve E, Pohorille A, (2001) Calculating free energies using average force. J Chem Phys 115: 9169.
-
(2001)
J Chem Phys
, vol.115
, pp. 9169
-
-
Darve, E.1
Pohorille, A.2
-
21
-
-
77951623621
-
Solution structure of the regulatory domain of human cardiac troponin C in complex with the switch region of cardiac troponin I and W7: The basis of W7 as an inhibitor of cardiac muscle contraction
-
Oleszczuk M, Robertson IM, Li MX, Sykes BD, (2010) Solution structure of the regulatory domain of human cardiac troponin C in complex with the switch region of cardiac troponin I and W7: The basis of W7 as an inhibitor of cardiac muscle contraction. J Mol Cell Cardiol 48: 925-933.
-
(2010)
J Mol Cell Cardiol
, vol.48
, pp. 925-933
-
-
Oleszczuk, M.1
Robertson, I.M.2
Li, M.X.3
Sykes, B.D.4
-
22
-
-
0032463337
-
The NMR angle on troponin C
-
Gagn'e SMS, Li MXM, McKay RTR, Sykes BDB, (1998) The NMR angle on troponin C. Biochem Cell Biol 76: 302-312.
-
(1998)
Biochem Cell Biol
, vol.76
, pp. 302-312
-
-
Gagn'e, S.M.S.1
Li, M.X.M.2
McKay, R.T.R.3
Sykes, B.D.B.4
-
23
-
-
0034760077
-
Dynamic activation of protein function: a view emerging from NMR spectroscopy
-
Wand A, (2001) Dynamic activation of protein function: a view emerging from NMR spectroscopy. Nat Struct Mol Biol 8: 926-931.
-
(2001)
Nat Struct Mol Biol
, vol.8
, pp. 926-931
-
-
Wand, A.1
-
24
-
-
77951281285
-
The role of conformational entropy in molecular recognition by calmodulin
-
Marlow MS, Dogan J, Frederick KK, Valentine KG, Wand AJ, (2010) The role of conformational entropy in molecular recognition by calmodulin. Nat Chem Biol 6: 352-358.
-
(2010)
Nat Chem Biol
, vol.6
, pp. 352-358
-
-
Marlow, M.S.1
Dogan, J.2
Frederick, K.K.3
Valentine, K.G.4
Wand, A.J.5
-
26
-
-
40549134985
-
Electrostatic rate enhancement and transient complex of proteinprotein association
-
Alsallaq R, Zhou HX, (2008) Electrostatic rate enhancement and transient complex of proteinprotein association. Prot Func Bioinformatics 71: 320-335.
-
(2008)
Prot Func Bioinformatics
, vol.71
, pp. 320-335
-
-
Alsallaq, R.1
Zhou, H.X.2
-
27
-
-
0021953047
-
Calcium binding to troponin C and troponin: effects of Mg2+, ionic strength and pH
-
Ogawa Y, (1985) Calcium binding to troponin C and troponin: effects of Mg2+, ionic strength and pH. J Biochem 97: 1011-1023.
-
(1985)
J Biochem
, vol.97
, pp. 1011-1023
-
-
Ogawa, Y.1
-
28
-
-
0031793436
-
The kinetic cycle of cardiac troponin C: Calcium binding and dissociation at site II trigger slow conformational rearrangements
-
Hazard AL, Kohout SC, Stricker NL, Putkey JA, Falke JJ, (1998) The kinetic cycle of cardiac troponin C: Calcium binding and dissociation at site II trigger slow conformational rearrangements. Prot Sci 7: 2451-2459.
-
(1998)
Prot Sci
, vol.7
, pp. 2451-2459
-
-
Hazard, A.L.1
Kohout, S.C.2
Stricker, N.L.3
Putkey, J.A.4
Falke, J.J.5
-
29
-
-
0037059456
-
Myofilament Calcium Sensitivity in Skinned Rat Cardiac Trabeculae: Role of Interfilament Spacing
-
Konhilas JP, (2001) Myofilament Calcium Sensitivity in Skinned Rat Cardiac Trabeculae: Role of Interfilament Spacing. Circ Res 90: 59-65.
-
(2001)
Circ Res
, vol.90
, pp. 59-65
-
-
Konhilas, J.P.1
-
30
-
-
0037188409
-
Effect of hydrophobic residue substitutions with glutamine on Ca2+ binding and exchange with the N-domain of troponin C
-
Tikunova S, Rall J, Davis J, (2002) Effect of hydrophobic residue substitutions with glutamine on Ca2+ binding and exchange with the N-domain of troponin C. Biochemistry 41: 6697-6705.
-
(2002)
Biochemistry
, vol.41
, pp. 6697-6705
-
-
Tikunova, S.1
Rall, J.2
Davis, J.3
-
31
-
-
0017751668
-
The Protein Data Bank. A Computer-Based Archival File for Macromolecular Structures
-
BERNSTEIN FC, KOETZLE TF, WILLIAMS GJB, MEYER EF, BRICE MD, et al. (1977) The Protein Data Bank. A Computer-Based Archival File for Macromolecular Structures. Eur J Biochem 80: 319-324.
-
(1977)
Eur J Biochem
, vol.80
, pp. 319-324
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.J.B.3
Meyer, E.F.4
Brice, M.D.5
-
33
-
-
67650500988
-
CHARMM: The biomolecular simulation program
-
Brooks BR, Brooks CL III, Mackerell AD Jr, Nilsson L, Petrella RJ, et al. (2009) CHARMM: The biomolecular simulation program. J Comp Chem 30: 1545-1614.
-
(2009)
J Comp Chem
, vol.30
, pp. 1545-1614
-
-
Brooks, B.R.1
Brooks III, C.L.2
Mackerell Jr., A.D.3
Nilsson, L.4
Petrella, R.J.5
-
34
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips J, Braun R, WangW, Gumbart J, Tajkhorshid E, et al. (2005) Scalable molecular dynamics with NAMD. J Comp Chem 26: 1781-1802.
-
(2005)
J Comp Chem
, vol.26
, pp. 1781-1802
-
-
Phillips, J.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
-
35
-
-
77951779697
-
Free energy calculations: An efficient adaptive biasing potential method
-
Dickson B, Legoll F, Lelievre T, Stoltz G, Fleurat-Lessard P, (2010) Free energy calculations: An efficient adaptive biasing potential method. J Phys Chem B 114: 5823-5830.
-
(2010)
J Phys Chem B
, vol.114
, pp. 5823-5830
-
-
Dickson, B.1
Legoll, F.2
Lelievre, T.3
Stoltz, G.4
Fleurat-Lessard, P.5
-
36
-
-
33750398103
-
Bio3d: an R package for the comparative analysis of protein structures
-
Grant BJ, Rodrigues APC, ElSawy KM, McCammon J, Caves LSD, (2006) Bio3d: an R package for the comparative analysis of protein structures. Bioinformatics 22: 2695-2696.
-
(2006)
Bioinformatics
, vol.22
, pp. 2695-2696
-
-
Grant, B.J.1
Rodrigues, A.P.C.2
ElSawy, K.M.3
McCammon, J.4
Caves, L.S.D.5
-
37
-
-
30444448249
-
The GROMOS software for biomolecular simulation: GROMOS05
-
Christen MM, Ḧunenberger PHP, Bakowies DD, Baron RR, B̈urgi RR, et al. (2005) The GROMOS software for biomolecular simulation: GROMOS05. J Comp Chem 26: 1719-1751.
-
(2005)
J Comp Chem
, vol.26
, pp. 1719-1751
-
-
Christen, M.M.1
Ḧunenberger, P.H.P.2
Bakowies, D.D.3
Baron, R.R.4
B̈urgi, R.R.5
-
38
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch WW, Sander CC, (1983) Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22: 2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.W.1
Sander, C.C.2
-
39
-
-
0036359353
-
Vector geometry mapping. A method to characterize the conformation of helix-loop-helix calcium-binding proteins
-
Yap KLK, Ames JBJ, Ikura MM 4, (2002) Vector geometry mapping. A method to characterize the conformation of helix-loop-helix calcium-binding proteins. Methods Mol Biol 173: 317-324.
-
(2002)
Methods Mol Biol
, vol.173
, pp. 317-324
-
-
Yap, K.L.K.1
Ames, J.B.J.2
Ikura, M.M.3
-
40
-
-
0035964342
-
Electrostatics of nanosystems: Application to microtubules and the ribosome
-
Baker NA, (2001) Electrostatics of nanosystems: Application to microtubules and the ribosome. Proc Natl Acad Sci U S A 98: 10037-10041.
-
(2001)
Proc Natl Acad Sci U S A
, vol.98
, pp. 10037-10041
-
-
Baker, N.A.1
-
41
-
-
0037165750
-
General framework for studying the dynamics of folded and nonfolded proteins by NMR relaxation spectroscopy and MD simulation
-
Prompers JJ, Br̈uschweiler R, (2002) General framework for studying the dynamics of folded and nonfolded proteins by NMR relaxation spectroscopy and MD simulation. J Am Chem Soc 124: 4522-4534.
-
(2002)
J Am Chem Soc
, vol.124
, pp. 4522-4534
-
-
Prompers, J.J.1
Br̈uschweiler, R.2
-
42
-
-
77956262968
-
Browndye: A Software Package for Brownian Dynamics
-
Huber GA, McCammon JA, (2010) Browndye: A Software Package for Brownian Dynamics. Comput Phys Commun 181: 1896-1905.
-
(2010)
Comput Phys Commun
, vol.181
, pp. 1896-1905
-
-
Huber, G.A.1
McCammon, J.A.2
-
43
-
-
34547559704
-
PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations
-
Dolinsky TJ, Czodrowski P, Li H, Nielsen JE, Jensen JH, et al. (2007) PDB2PQR: expanding and upgrading automated preparation of biomolecular structures for molecular simulations. Nucleic Acids Res 35: W522-W525.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Dolinsky, T.J.1
Czodrowski, P.2
Li, H.3
Nielsen, J.E.4
Jensen, J.H.5
|