-
1
-
-
67650087599
-
New class of microRNA targets containing simultaneous 5'-UTR and 3'-UTR interaction sites
-
Lee I, Ajay SS, Yook JI et al. New class of microRNA targets containing simultaneous 5'-UTR and 3'-UTR interaction sites. Genome Res. 2009; 19: 1175-83
-
(2009)
Genome Res
, vol.19
, pp. 1175-1183
-
-
Lee, I.1
Ajay, S.S.2
Yook, J.I.3
-
2
-
-
38349169664
-
Mechanisms of post-transcriptional regulation by microRNAs: Are the answers in sight?
-
Filipowicz W, Bhattacharyya SN, Sonenberg N. Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight? Nat Rev Genet. 2008; 9: 102-14
-
(2008)
Nat Rev Genet
, vol.9
, pp. 102-114
-
-
Filipowicz, W.1
Bhattacharyya, S.N.2
Sonenberg, N.3
-
3
-
-
67649663873
-
Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
-
Kato M, de Lencastre A, Pincus Z et al. Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development. Genome Biol. 2009; 10: R54
-
(2009)
Genome Biol
, vol.10
-
-
Kato, M.1
de Lencastre, A.2
Pincus, Z.3
-
4
-
-
0037418839
-
bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila
-
Brennecke J, Hipfner DR, Stark A et al. bantam encodes a developmentally regulated microRNA that controls cell proliferation and regulates the proapoptotic gene hid in Drosophila. Cell. 2003; 113: 25-36
-
(2003)
Cell
, vol.113
, pp. 25-36
-
-
Brennecke, J.1
Hipfner, D.R.2
Stark, A.3
-
5
-
-
0037144457
-
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
-
Llave C, Xie Z, Kasschau KD et al. Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science. 2002; 297: 2053-6
-
(2002)
Science
, vol.297
, pp. 2053-2056
-
-
Llave, C.1
Xie, Z.2
Kasschau, K.D.3
-
6
-
-
20844463414
-
Identification of microRNAs of the herpesvirus family
-
Pfeffer S, Sewer A, Lagos-Quintana M et al. Identification of microRNAs of the herpesvirus family. Nat Methods. 2005; 2: 269-76
-
(2005)
Nat Methods
, vol.2
, pp. 269-276
-
-
Pfeffer, S.1
Sewer, A.2
Lagos-Quintana, M.3
-
7
-
-
0027751663
-
Elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14
-
Lee RC, Feinbaum RL, Ambros V. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell. 1993; 75: 843-54
-
(1993)
Cell
, vol.75
, pp. 843-854
-
-
Lee, R.C.1
Feinbaum, R.L.2
Ambros, V.3
The, C.4
-
8
-
-
0027730383
-
Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans
-
Wightman B, Ha I, Ruvkun G. Posttranscriptional regulation of the heterochronic gene lin-14 by lin-4 mediates temporal pattern formation in C. elegans. Cell. 1993; 75: 855-62
-
(1993)
Cell
, vol.75
, pp. 855-862
-
-
Wightman, B.1
Ha, I.2
Ruvkun, G.3
-
9
-
-
0034708122
-
The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans
-
Reinhart BJ, Slack FJ, Basson M et al. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans. Nature. 2000; 403: 901-6
-
(2000)
Nature
, vol.403
, pp. 901-906
-
-
Reinhart, B.J.1
Slack, F.J.2
Basson, M.3
-
10
-
-
39549097946
-
Computational and transcriptional evidence for microRNAs in the honey bee genome
-
Weaver DB, Anzola JM, Evans JD et al. Computational and transcriptional evidence for microRNAs in the honey bee genome. Genome Biol. 2007; 8: R97
-
(2007)
Genome Biol
, vol.8
-
-
Weaver, D.B.1
Anzola, J.M.2
Evans, J.D.3
-
11
-
-
46049085388
-
Identification and characteristics of microRNAs from Bombyx mori
-
He PA, Nie Z, Chen J et al. Identification and characteristics of microRNAs from Bombyx mori. BMC Genomics. 2008; 9: 248
-
(2008)
BMC Genomics
, vol.9
, pp. 248
-
-
He, P.A.1
Nie, Z.2
Chen, J.3
-
12
-
-
33748928159
-
The diverse functions of microRNAs in animal development and disease
-
Kloosterman WP, Plasterk RH. The diverse functions of microRNAs in animal development and disease. Dev Cell. 2006; 11: 441-50
-
(2006)
Dev Cell
, vol.11
, pp. 441-450
-
-
Kloosterman, W.P.1
Plasterk, R.H.2
-
13
-
-
4644309196
-
The functions of animal microRNAs
-
Ambros V. The functions of animal microRNAs. Nature. 2004; 431: 350-5
-
(2004)
Nature
, vol.431
, pp. 350-355
-
-
Ambros, V.1
-
14
-
-
0038299558
-
Role of microRNAs in plant and animal development
-
Carrington JC, Ambros V. Role of microRNAs in plant and animal development. Science. 2003; 301: 336-8
-
(2003)
Science
, vol.301
, pp. 336-338
-
-
Carrington, J.C.1
Ambros, V.2
-
15
-
-
0037790717
-
Temporal regulation of microRNA expression in Drosophila melanogaster mediated by hormonal signals and broad-Complex gene activity
-
Sempere LF, Sokol NS, Dubrovsky EB et al. Temporal regulation of microRNA expression in Drosophila melanogaster mediated by hormonal signals and broad-Complex gene activity. Dev Biol. 2003; 259: 9-18
-
(2003)
Dev Biol
, vol.259
, pp. 9-18
-
-
Sempere, L.F.1
Sokol, N.S.2
Dubrovsky, E.B.3
-
16
-
-
34548863687
-
Cohen SM. microRNA miR-14 acts to modulate a positive autoregulatory loop controlling steroid hormone signaling in Drosophila
-
Varghese J, Cohen SM. microRNA miR-14 acts to modulate a positive autoregulatory loop controlling steroid hormone signaling in Drosophila. Genes Dev. 2007; 21: 2277-82
-
(2007)
Genes Dev
, vol.21
, pp. 2277-2282
-
-
Varghese, J.1
-
17
-
-
25844460031
-
Mesodermally expressed Drosophila microRNA-1 is regulated by Twist and is required in muscles during larval growth
-
Sokol NS, Ambros V. Mesodermally expressed Drosophila microRNA-1 is regulated by Twist and is required in muscles during larval growth. Genes Dev. 2005; 19: 2343-54
-
(2005)
Genes Dev
, vol.19
, pp. 2343-2354
-
-
Sokol, N.S.1
Ambros, V.2
-
18
-
-
21244448730
-
Antisense-mediated depletion reveals essential and specific functions of microRNAs in Drosophila development
-
Leaman D, Chen PY, Fak J et al. Antisense-mediated depletion reveals essential and specific functions of microRNAs in Drosophila development. Cell. 2005; 121: 1097-108
-
(2005)
Cell
, vol.121
, pp. 1097-1108
-
-
Leaman, D.1
Chen, P.Y.2
Fak, J.3
-
19
-
-
84863027442
-
A New Strategy for Identification of Highly Conserved microRNAs in Non-Model Insect, Spodoptera litura
-
Gao L, Zuo H, Liu K et al. A New Strategy for Identification of Highly Conserved microRNAs in Non-Model Insect, Spodoptera litura. Int J Mol Sci. 2012; 13: 612-27
-
(2012)
Int J Mol Sci
, vol.13
, pp. 612-627
-
-
Gao, L.1
Zuo, H.2
Liu, K.3
-
20
-
-
84861475068
-
Identification, expression and target gene analyses of micrornas in Spodoptera litura
-
Rao Z, He W, Liu L et al. Identification, expression and target gene analyses of micrornas in Spodoptera litura. PLoS One. 2012; 7: e37730
-
(2012)
PLoS One
, vol.7
-
-
Rao, Z.1
He, W.2
Liu, L.3
-
21
-
-
34848898946
-
Conservation and evolution of miRNA regulatory programs in plant development
-
Willmann MR, Poethig RS. Conservation and evolution of miRNA regulatory programs in plant development. Curr Opin Plant Biol. 2007; 10: 503-11
-
(2007)
Curr Opin Plant Biol
, vol.10
, pp. 503-511
-
-
Willmann, M.R.1
Poethig, R.S.2
-
22
-
-
70350705948
-
Repertoire and evolution of miRNA genes in four divergent nematode species
-
de Wit E, Linsen SE, Cuppen E et al. Repertoire and evolution of miRNA genes in four divergent nematode species. Genome Res. 2009; 19: 2064-74
-
(2009)
Genome Res
, vol.19
, pp. 2064-2074
-
-
de Wit, E.1
Linsen, S.E.2
Cuppen, E.3
-
23
-
-
77958462907
-
Origins and Evolution of MicroRNA Genes in Drosophila Species
-
Nozawa M, Miura S, Nei M. Origins and Evolution of MicroRNA Genes in Drosophila Species. Genome Biol Evol. 2010; 2: 180-9
-
(2010)
Genome Biol Evol
, vol.2
, pp. 180-189
-
-
Nozawa, M.1
Miura, S.2
Nei, M.3
-
24
-
-
13444309574
-
SilkDB: A knowledgebase for silkworm biology and genomics
-
Wang J, Xia Q, He X et al. SilkDB: a knowledgebase for silkworm biology and genomics. Nucleic Acids Res. 2005; 33: D399-402
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Wang, J.1
Xia, Q.2
He, X.3
-
25
-
-
10344265019
-
A draft sequence for the genome of the domesticated silkworm (Bombyx mori)
-
Xia Q, Zhou Z, Lu C et al. A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science. 2004; 306: 1937-40
-
(2004)
Science
, vol.306
, pp. 1937-1940
-
-
Xia, Q.1
Zhou, Z.2
Lu, C.3
-
26
-
-
78951490342
-
Characterisation and expression of microRNAs in developing wings of the neotropical butterfly Heliconius melpomene
-
Surridge AK, Lopez-Gomollon S, Moxon S et al. Characterisation and expression of microRNAs in developing wings of the neotropical butterfly Heliconius melpomene. BMC Genomics. 2011; 12: 62
-
(2011)
BMC Genomics
, vol.12
, pp. 62
-
-
Surridge, A.K.1
Lopez-Gomollon, S.2
Moxon, S.3
-
27
-
-
81855174762
-
The monarch butterfly genome yields insights into long-distance migration
-
Zhan S, Merlin C, Boore JL et al. The monarch butterfly genome yields insights into long-distance migration. Cell. 2011; 147: 1171-85
-
(2011)
Cell
, vol.147
, pp. 1171-1185
-
-
Zhan, S.1
Merlin, C.2
Boore, J.L.3
-
28
-
-
84862829539
-
Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta
-
Zhang X, Zheng Y, Jagadeeswaran G et al. Identification and developmental profiling of conserved and novel microRNAs in Manduca sexta. Insect Biochem Mol Biol. 2012; 42: 381-95
-
(2012)
Insect Biochem Mol Biol
, vol.42
, pp. 381-395
-
-
Zhang, X.1
Zheng, Y.2
Jagadeeswaran, G.3
-
29
-
-
34547781750
-
MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
-
Tamura K, Dudley J, Nei M et al. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 2007; 24: 1596-9
-
(2007)
Mol Biol Evol
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
-
30
-
-
38549124383
-
The microRNA.org resource: Targets and expression
-
Betel D, Wilson M, Gabow A et al. The microRNA.org resource: targets and expression. Nucleic Acids Res. 2008; 36: D149-53
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Betel, D.1
Wilson, M.2
Gabow, A.3
-
32
-
-
33947424813
-
MicroTar: Predicting microRNA targets from RNA duplexes
-
Thadani R, Tammi MT. MicroTar: predicting microRNA targets from RNA duplexes. BMC Bioinformatics. 2006; 7 Suppl 5: S20
-
(2006)
BMC Bioinformatics
, Issue.7 SUPPL. 5
-
-
Thadani, R.1
Tammi, M.T.2
-
33
-
-
67449088149
-
Large-scale genome analysis reveals unique features of microRNAs
-
Zhang B, Stellwag EJ, Pan X. Large-scale genome analysis reveals unique features of microRNAs. Gene. 2009; 443: 100-9
-
(2009)
Gene
, vol.443
, pp. 100-109
-
-
Zhang, B.1
Stellwag, E.J.2
Pan, X.3
-
34
-
-
38549141630
-
piRNABank: A web resource on classified and clustered Piwi-interacting RNAs
-
Sai Lakshmi S, Agrawal S. piRNABank: a web resource on classified and clustered Piwi-interacting RNAs. Nucleic Acids Res. 2008; 36: D173-7
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Sai, L.S.1
Agrawal, S.2
-
38
-
-
0037370020
-
A uniform system for microRNA annotation
-
Ambros V, Bartel B, Bartel DP et al. A uniform system for microRNA annotation. RNA. 2003; 9: 277-9
-
(2003)
RNA
, vol.9
, pp. 277-279
-
-
Ambros, V.1
Bartel, B.2
Bartel, D.P.3
-
39
-
-
0035955361
-
An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans
-
Lau NC, Lim LP, Weinstein EG et al. An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans. Science. 2001; 294: 858-62
-
(2001)
Science
, vol.294
, pp. 858-862
-
-
Lau, N.C.1
Lim, L.P.2
Weinstein, E.G.3
-
40
-
-
58249088751
-
MicroRNAs: Target recognition and regulatory functions
-
Bartel DP. MicroRNAs: target recognition and regulatory functions. Cell. 2009; 136: 215-33
-
(2009)
Cell
, vol.136
, pp. 215-233
-
-
Bartel, D.P.1
-
41
-
-
77349092849
-
Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
-
Jagadeeswaran G, Zheng Y, Sumathipala N et al. Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development. BMC Genomics. 2010; 11:52
-
(2010)
BMC Genomics
, vol.11
, pp. 52
-
-
Jagadeeswaran, G.1
Zheng, Y.2
Sumathipala, N.3
-
42
-
-
55249097473
-
Cleavage of the star strand facilitates assembly of some microRNAs into Ago2-containing silencing complexes in mammals
-
Shin C. Cleavage of the star strand facilitates assembly of some microRNAs into Ago2-containing silencing complexes in mammals. Mol Cells. 2008; 26: 308-13
-
(2008)
Mol Cells
, vol.26
, pp. 308-313
-
-
Shin, C.1
-
43
-
-
33644756685
-
Micro RNAs in animal development
-
Plasterk RH. Micro RNAs in animal development. Cell. 2006; 124: 877-81
-
(2006)
Cell
, vol.124
, pp. 877-881
-
-
Plasterk, R.H.1
-
44
-
-
77954573536
-
Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay
-
Dolken L, Malterer G, Erhard F et al. Systematic analysis of viral and cellular microRNA targets in cells latently infected with human gamma-herpesviruses by RISC immunoprecipitation assay. Cell Host Microbe. 2010; 7: 324-34
-
(2010)
Cell Host Microbe
, vol.7
, pp. 324-334
-
-
Dolken, L.1
Malterer, G.2
Erhard, F.3
-
45
-
-
77349092849
-
Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
-
Jagadeeswaran G, Zheng Y, Sumathipala N et al. Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development. BMC Genomics. 2010; 11: 52
-
(2010)
BMC Genomics
, vol.11
, pp. 52
-
-
Jagadeeswaran, G.1
Zheng, Y.2
Sumathipala, N.3
-
46
-
-
77950433105
-
MicroRNAs of Bombyx mori identified by Solexa sequencing
-
Liu S, Li D, Li Q et al. MicroRNAs of Bombyx mori identified by Solexa sequencing. BMC Genomics. 2010; 11: 148
-
(2010)
BMC Genomics
, vol.11
, pp. 148
-
-
Liu, S.1
Li, D.2
Li, Q.3
-
47
-
-
84855389479
-
Genomic sequence around butterfly wing development genes: Annotation and comparative analysis
-
Conceicao IC, Long AD, Gruber JD et al. Genomic sequence around butterfly wing development genes: annotation and comparative analysis. PLoS One. 2011; 6: e23778
-
(2011)
PLoS One
, vol.6
-
-
Conceicao, I.C.1
Long, A.D.2
Gruber, J.D.3
-
48
-
-
50549095181
-
let-7 microRNAs in development, stem cells and cancer
-
Bussing I, Slack FJ, Grosshans H. let-7 microRNAs in development, stem cells and cancer. Trends Mol Med. 2008; 14: 400-9
-
(2008)
Trends Mol Med
, vol.14
, pp. 400-409
-
-
Bussing, I.1
Slack, F.J.2
Grosshans, H.3
-
49
-
-
84859830814
-
Hormonal activation of let-7-C microRNAs via EcR is required for adult Drosophila melanogaster morphology and function
-
Chawla G, Sokol NS. Hormonal activation of let-7-C microRNAs via EcR is required for adult Drosophila melanogaster morphology and function. Development. 2012; 139: 1788-97
-
(2012)
Development
, vol.139
, pp. 1788-1797
-
-
Chawla, G.1
Sokol, N.S.2
-
50
-
-
45349099216
-
Drosophila let-7 microRNA is required for remodeling of the neuromusculature during metamorphosis
-
Sokol NS, Xu P, Jan YN et al. Drosophila let-7 microRNA is required for remodeling of the neuromusculature during metamorphosis. Genes & development. 2008; 22: 1591-6
-
(2008)
Genes & Development
, vol.22
, pp. 1591-1596
-
-
Sokol, N.S.1
Xu, P.2
Jan, Y.N.3
-
52
-
-
38149071979
-
Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs
-
Ruby JG, Stark A, Johnston WK et al. Evolution, biogenesis, expression, and target predictions of a substantially expanded set of Drosophila microRNAs. Genome Res. 2007; 17: 1850-64
-
(2007)
Genome Res
, vol.17
, pp. 1850-1864
-
-
Ruby, J.G.1
Stark, A.2
Johnston, W.K.3
-
53
-
-
77958474656
-
Functional shifts in insect microRNA evolution
-
Marco A, Hui JH, Ronshaugen M et al. Functional shifts in insect microRNA evolution. Genome Biol Evol. 2010; 2: 686-96
-
(2010)
Genome Biol Evol
, vol.2
, pp. 686-696
-
-
Marco, A.1
Hui, J.H.2
Ronshaugen, M.3
-
54
-
-
38849096973
-
MiR-10 represses HoxB1a and HoxB3a in zebrafish
-
Woltering JM, Durston AJ. MiR-10 represses HoxB1a and HoxB3a in zebrafish. PLoS One. 2008; 3: e1396
-
(2008)
PLoS One
, vol.3
-
-
Woltering, J.M.1
Durston, A.J.2
-
55
-
-
34247253767
-
Identification and characterization of insect-specific proteins by genome data analysis
-
Zhang G, Wang H, Shi J et al. Identification and characterization of insect-specific proteins by genome data analysis. BMC Genomics. 2007; 8: 93
-
(2007)
BMC Genomics
, vol.8
, pp. 93
-
-
Zhang, G.1
Wang, H.2
Shi, J.3
-
56
-
-
28044455435
-
microPrimer: The biogenesis and function of microRNA
-
Du T, Zamore PD. microPrimer: the biogenesis and function of microRNA. Development. 2005; 132: 4645-52
-
(2005)
Development
, vol.132
, pp. 4645-4652
-
-
Du, T.1
Zamore, P.D.2
-
57
-
-
61849171653
-
Insect-Specific microRNA Involved in the Development of the Silkworm Bombyx mori
-
Zhang Y, Zhou X, Ge X et al. Insect-Specific microRNA Involved in the Development of the Silkworm Bombyx mori. PLoS One. 2009; 4: e4677
-
(2009)
PLoS One
, vol.4
-
-
Zhang, Y.1
Zhou, X.2
Ge, X.3
-
58
-
-
84860852665
-
Hsp90 globally targets paused RNA polymerase to regulate gene expression in response to environmental stimuli
-
Sawarkar R, Sievers C, Paro R. Hsp90 globally targets paused RNA polymerase to regulate gene expression in response to environmental stimuli. Cell. 2012; 149: 807-18
-
(2012)
Cell
, vol.149
, pp. 807-818
-
-
Sawarkar, R.1
Sievers, C.2
Paro, R.3
-
59
-
-
34548678862
-
Analysis of microRNA effector functions in vitro
-
Wang B, Doench JG, Novina CD. Analysis of microRNA effector functions in vitro. Methods. 2007; 43: 91-104.
-
(2007)
Methods
, vol.43
, pp. 91-104
-
-
Wang, B.1
Doench, J.G.2
Novina, C.D.3
|