The ydaO motif is an ATP-sensing riboswitch in Bacillus subtilis

Nature Chemical Biology

Volumn 8, Issue 12, 2012, Pages 963-965

  Watson, Peter Y ^a   Fedor, Martha J ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATE; BACTERIAL PROTEIN; UNCLASSIFIED DRUG; YDAO PROTEIN;

ARTICLE; BACILLUS SUBTILIS; CONTROLLED STUDY; ENERGY BALANCE; ENZYME BINDING; GENE EXPRESSION REGULATION; IN VITRO STUDY; NONHUMAN; PRIORITY JOURNAL; PROTEIN MOTIF; RIBOSWITCH;

ADENOSINE TRIPHOSPHATE; AMINO ACID MOTIFS; BACILLUS SUBTILIS; DIALYSIS; ENERGY METABOLISM; GENE EXPRESSION REGULATION, BACTERIAL; HOMEOSTASIS; MUTATION; NUCLEIC ACID CONFORMATION; RIBOSWITCH; RNA, BACTERIAL; ULTRAVIOLET RAYS;

BACILLUS SUBTILIS;

EID: 84870310480     PISSN: 15524450     EISSN: 15524469     Source Type: Journal    
DOI: 10.1038/nchembio.1095     Document Type: Article

References (25)

1. Tarasov, A.I., Griffiths, E.J. & Rutter, G.A. Cell Calcium 52, 28-35 (2012).
2. Hardie, D.G., Ross, F.A. & Hawley, S.A. Nat. Rev. Mol. Cell Biol. 13, 251-262 (2012).
3. Sluse, F.E. Adv. Exp. Med. Biol. 942, 137-156 (2012).
4. Bastet, L., Dube, A., Masse, E. & Lafontaine, D.A. Mol. Microbiol. 80, 1148-1154 (2011).
5. Sudarsan, N. et al. Science 321, 411-413 (2008).
6. Sassanfar, M. & Szostak, J.W. Nature 364, 550-553 (1993).
7. Smith, A.M., Fuchs, R.T., Grundy, F.J. & Henkin, T.M. RNA Biol. 7, 104-110 (2010).
8. Weinberg, Z. et al. Genome Biol. 11, R31 (2010).
9. Montange, R.K. et al. J. Mol. Biol. 396, 761-772 (2010).
10. Dieckmann, T., Suzuki, E., Nakamura, G.K. & Feigon, J. RNA 2, 628-640 (1996).
11. Block, K.F., Hammond, M.C. & Breaker, R.R. J. Bacteriol. 192, 3983-3989 (2010).
12. McTaggart, J.S., Clark, R.H. & Ashcroft, F.M. J. Physiol. (Lond.) 588, 3201-3209 (2010).
13. Dennis, P.B. et al. Science 294, 1102-1105 (2001).
14. McCabe, B.C. & Gollnick, P. J. Bacteriol. 186, 5157-5159 (2004).
15. Kato-Yamada, Y. FEBS Lett. 579, 6875-6878 (2005).
16. Gaal, T., Bartlett, M.S., Ross, W., Turnbough, C.L. Jr. & Gourse, R.L. Science 278, 2092-2097 (1997).
17. Regulski, E.E. & Breaker, R.R. Methods Mol. Biol. 419, 53-67 (2008).
18. Montange, R.K. & Batey, R.T. Annu. Rev. Biophys. 37, 117-133 (2008).
19. Watson, P.Y. & Fedor, M.J. Nat. Struct. Mol. Biol. 18, 359-363 (2011).
20. Noeske, J. et al. Proc. Natl. Acad. Sci. USA 102, 1372-1377 (2005).
21. Allenby, N.E. et al. J. Bacteriol. 187, 8063-8080 (2005).
22. Guffanti, A.A., Clejan, S., Falk, L.H., Hicks, D.B. & Krulwich, T.A. J. Bacteriol. 169, 4469-4478 (1987).
23. Barrick, J.E. et al. Proc. Natl. Acad. Sci. USA 101, 6421-6426 (2004).
24. Holtmann, G., Bakker, E.P., Uozumi, N. & Bremer, E. J. Bacteriol. 185, 1289-1298 (2003).
25. Lee, E.J. & Groisman, E.A. Nature 486, 271-275 (2012).