-
1
-
-
0034082239
-
The influence of natural products upon drug discovery
-
doi:10.1039/A902202C
-
Newman DJ, Cragg GM, Snader KM (2000) The influence of natural products upon drug discovery. Nat Prod Rep 17:215-234. doi:10.1039/A902202C
-
(2000)
Nat Prod Rep
, vol.17
, pp. 215-234
-
-
Newman, D.J.1
Cragg, G.M.2
Snader, K.M.3
-
2
-
-
27844474247
-
Drug discovery from medicinal plants
-
doi:10.1016/j.lfs.2005.09.012
-
Balunas MJ, Kinghorn AD (2005) Drug discovery from medicinal plants. Life Sci 78:431-441. doi:10.1016/j.lfs.2005.09.012
-
(2005)
Life Sci
, vol.78
, pp. 431-441
-
-
Balunas, M.J.1
Kinghorn, A.D.2
-
3
-
-
14944383798
-
The evolving role of natural products in drug discovery
-
doi: 10.1038/nrd1657
-
Koehn FE, Carter GT (2005) The evolving role of natural products in drug discovery. Nat Rev Drug Discov 4:206-220. doi: 10.1038/nrd1657
-
(2005)
Nat Rev Drug Discov
, vol.4
, pp. 206-220
-
-
Koehn, F.E.1
Carter, G.T.2
-
4
-
-
0042844744
-
Natural products as sources of new drugs over the period 1981-2002
-
doi:10.1021/np030096l
-
Newman DJ, Cragg GM, Snader KM (2003) Natural products as sources of new drugs over the period 1981-2002. J Nat Prod 66:1022-1037. doi:10.1021/np030096l
-
(2003)
J Nat Prod
, vol.66
, pp. 1022-1037
-
-
Newman, D.J.1
Cragg, G.M.2
Snader, K.M.3
-
5
-
-
27144547510
-
The renaissance of natural products as drug candidates
-
doi:10.1126/ science.1116364
-
Paterson I, Anderson EA (2005) The renaissance of natural products as drug candidates. Science 310:451-453. doi:10.1126/ science.1116364
-
(2005)
Science
, vol.310
, pp. 451-453
-
-
Paterson, I.1
Anderson, E.A.2
-
8
-
-
73349085562
-
Working outside the protein-synthesis rules: Insights into non-ribosomal peptide synthesis
-
doi:10.1002/psc.1183
-
Marahiel MA (2009) Working outside the protein-synthesis rules: insights into non-ribosomal peptide synthesis. J Pept Sci 15:799-807. doi:10.1002/psc.1183
-
(2009)
J Pept Sci
, vol.15
, pp. 799-807
-
-
Marahiel, M.A.1
-
9
-
-
0033179468
-
The specificityconferring code of adenylation domains in nonribosomal peptide synthetases
-
doi:10.1016/S1074-5521 (99)80082-9
-
Stachelhaus T, Mootz HD, Marahiel MA (1999) The specificityconferring code of adenylation domains in nonribosomal peptide synthetases. Chem Biol 6:493-505. doi:10.1016/S1074-5521 (99)80082-9
-
(1999)
Chem Biol
, vol.6
, pp. 493-505
-
-
Stachelhaus, T.1
Mootz, H.D.2
Marahiel, M.A.3
-
10
-
-
79959936207
-
NRPSpredictor2 - A web server for predicting NRPS adenylation domain specificity
-
doi:10.1093/nar/gkr323
-
Rottig M, Medema MH, Blin K, Weber T, Rausch C, Kohlbacher O (2011) NRPSpredictor2 - a web server for predicting NRPS adenylation domain specificity. Nucleic Acids Res 39:362-367. doi:10.1093/nar/gkr323
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 362-367
-
-
Rottig, M.1
Medema, M.H.2
Blin, K.3
Weber, T.4
Rausch, C.5
Kohlbacher, O.6
-
11
-
-
26944502019
-
Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)
-
doi:10.1093/nar/gki885
-
Rausch C, Weber T, Kohlbacher O, Wohlleben W, Huson DH (2005) Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs). Nucleic Acids Res 33:5799-5808. doi:10.1093/nar/gki885
-
(2005)
Nucleic Acids Res
, vol.33
, pp. 5799-5808
-
-
Rausch, C.1
Weber, T.2
Kohlbacher, O.3
Wohlleben, W.4
Huson, D.H.5
-
12
-
-
0034013269
-
Predictive, structurebased model of amino acid recognition by nonribosomal peptide synthetase adenylation domains
-
doi: 10.1016/S1074-5521(00)00091-0
-
Challis GL, Ravel J, Townsend CA (2000) Predictive, structurebased model of amino acid recognition by nonribosomal peptide synthetase adenylation domains. Chem Biol 7:211-224. doi: 10.1016/S1074-5521(00)00091-0
-
(2000)
Chem Biol
, vol.7
, pp. 211-224
-
-
Challis, G.L.1
Ravel, J.2
Townsend, C.A.3
-
13
-
-
79959920872
-
Anti- SMASH: Rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences
-
doi:10.1093/nar/gkr466
-
Medema MH, Blin K, Cimermancic P, de Jager V, Zakrzewski P, Fischbach MA, Weber T, Takano E, Breitling R (2011) anti- SMASH: rapid identification, annotation and analysis of secondary metabolite biosynthesis gene clusters in bacterial and fungal genome sequences. Nucleic Acids Res 39(2):W339- W346. doi:10.1093/nar/gkr466
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.2
-
-
Medema, M.H.1
Blin, K.2
Cimermancic, P.3
De Jager, V.4
Zakrzewski, P.5
Fischbach, M.A.6
Weber, T.7
Takano, E.8
Breitling, R.9
-
14
-
-
38549094609
-
-
doi:10.1093/nar/gkm792
-
Caboche S, Pupin M, Leclere V, Fontaine A, Jacques P, Kucherov G (2008) NORINE: a database of nonribosomal peptides. Nucleic Acids Res 36:D326-D331. doi:10.1093/nar/gkm792
-
(2008)
NORINE: A Database of Nonribosomal Peptides. Nucleic Acids Res
, vol.36
-
-
Caboche, S.1
Pupin, M.2
Leclere, V.3
Fontaine, A.4
Jacques, P.5
Kucherov, G.6
-
15
-
-
43949145741
-
Computational analysis of ligand relationships within target families
-
doi: 10.1016/j.cbpa.2008.01.044
-
Bajorath J (2008) Computational analysis of ligand relationships within target families. Curr Opin Chem Biol 12:352-358. doi: 10.1016/j.cbpa.2008.01.044
-
(2008)
Curr Opin Chem Biol
, vol.12
, pp. 352-358
-
-
Bajorath, J.1
-
16
-
-
34548304745
-
In silico pharmacology for drug discovery: Methods for virtual ligand screening and profiling
-
doi:10.1038/sj.bjp.0707305
-
Ekins S, Mestres J, Testa B (2007) In silico pharmacology for drug discovery: methods for virtual ligand screening and profiling. Br J Pharmacol 152:9-20. doi:10.1038/sj.bjp.0707305
-
(2007)
Br J Pharmacol
, vol.152
, pp. 9-20
-
-
Ekins, S.1
Mestres, J.2
Testa, B.3
-
17
-
-
77957370432
-
Diversity of monomers in nonribosomal peptides: Towards the prediction of origin and biological activity
-
doi:10.1128/jb.00315-10
-
Caboche S, Leclere V, Pupin M, Kucherov G, Jacques P (2010) Diversity of monomers in nonribosomal peptides: towards the prediction of origin and biological activity. J Bacteriol 192:5143-5150. doi:10.1128/jb.00315-10
-
(2010)
J Bacteriol
, vol.192
, pp. 5143-5150
-
-
Caboche, S.1
Leclere, V.2
Pupin, M.3
Kucherov, G.4
Jacques, P.5
-
18
-
-
77954043914
-
Ligandbased virtual screening using bayesian networks
-
doi:10.1021/ci100090p
-
Abdo A, Chen B, Mueller C, Salim N, Willett P (2010) Ligandbased virtual screening using bayesian networks. J Chem Inf Model 50:1012-1020. doi:10.1021/ci100090p
-
(2010)
J Chem Inf Model
, vol.50
, pp. 1012-1020
-
-
Abdo, A.1
Chen, B.2
Mueller, C.3
Salim, N.4
Willett, P.5
-
19
-
-
79952614063
-
New fragment weighting scheme for the bayesian inference network in ligand-based virtual screening
-
doi:10.1021/ci100232h
-
Abdo A, Salim N (2011) New fragment weighting scheme for the bayesian inference network in ligand-based virtual screening. J Chem Inf Model 51:25-32. doi:10.1021/ci100232h
-
(2011)
J Chem Inf Model
, vol.51
, pp. 25-32
-
-
Abdo, A.1
Salim, N.2
-
20
-
-
80053501637
-
Implementing relevance feedback in ligand-based virtual screening using bayesian inference network
-
doi:10.1177/ 1087057111416658
-
Abdo A, Salim N, Ahmed A (2011) Implementing relevance feedback in ligand-based virtual screening using bayesian inference network. J Biomol Screen 16:1081-1088. doi:10.1177/ 1087057111416658
-
(2011)
J Biomol Screen
, vol.16
, pp. 1081-1088
-
-
Abdo, A.1
Salim, N.2
Ahmed, A.3
-
21
-
-
69249211345
-
Analysis and use of fragmentoccurrence data in similarity-based virtual screening
-
doi:10.1007/s10822-009-9285-0
-
Arif S, Holliday J, Willett P (2009) Analysis and use of fragmentoccurrence data in similarity-based virtual screening. J Comput Aided Mol Des 23:655-668. doi:10.1007/s10822-009-9285-0
-
(2009)
J Comput Aided Mol des
, vol.23
, pp. 655-668
-
-
Arif, S.1
Holliday, J.2
Willett, P.3
-
22
-
-
76749092270
-
The WEKA data mining software: An update
-
doi:10.1145/1656274.1656278
-
Hall M, Frank E, Holmes G, Pfahringer B, Reutemann P, Witten IH (2009) The WEKA data mining software: an update. SIGKDD Explor Newsl 11:10-18. doi:10.1145/1656274.1656278
-
(2009)
SIGKDD Explor Newsl
, vol.11
, pp. 10-18
-
-
Hall, M.1
Frank, E.2
Holmes, G.3
Pfahringer, B.4
Reutemann, P.5
Witten, I.H.6
-
25
-
-
50949133669
-
LIBLINEAR: A library for large linear classification
-
Fan R-E, Chang K-W, Hsieh C-J, Wang X-R, Lin C-J (2008) LIBLINEAR: a library for large linear classification. J Mach Learn Res 9:1871-1874
-
(2008)
J Mach Learn Res
, vol.9
, pp. 1871-1874
-
-
Fan, R.-E.1
Chang, K.-W.2
Hsieh, C.-J.3
Wang, X.-R.4
Lin, C.-J.5
-
26
-
-
0000545946
-
Improvements to Platt's SMO algorithm for SVM classifier design
-
doi:10.1162/08997660 1300014493
-
Keerthi SS, Shevade SK, Bhattacharyya C, Murthy KRK (2001) Improvements to Platt's SMO algorithm for SVM classifier design. Neural Comput 13:637-649. doi:10.1162/08997660 1300014493
-
(2001)
Neural Comput
, vol.13
, pp. 637-649
-
-
Keerthi, S.S.1
Shevade, S.K.2
Bhattacharyya, C.3
Murthy, K.R.K.4
-
27
-
-
0023890867
-
Measuring the accuracy of diagnostic systems
-
doi:10.1126/science.3287615
-
Swets J (1988) Measuring the accuracy of diagnostic systems. Science 240:1285-1293. doi:10.1126/science.3287615
-
(1988)
Science
, vol.240
, pp. 1285-1293
-
-
Swets, J.1
-
28
-
-
17144385534
-
Virtual screening workflow development guided by the ''Receiver Operating Characteristic'' curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4
-
doi:10.1021/ jm049092j
-
Triballeau N, Acher F, Brabet I, Pin J-P, Bertrand H-O (2005) Virtual screening workflow development guided by the ''Receiver Operating Characteristic'' curve approach. Application to high-throughput docking on metabotropic glutamate receptor subtype 4. J Med Chem 48(7):2534-2547. doi:10.1021/ jm049092j
-
(2005)
J Med Chem
, vol.48
, Issue.7
, pp. 2534-2547
-
-
Triballeau, N.1
Acher, F.2
Brabet, I.3
Pin, J.-P.4
Bertrand, H.-O.5
-
29
-
-
0034659816
-
Coelichelin, a new peptide siderophore encoded by the Streptomyces coelicolor genome: Structure prediction from the sequence of its non-ribosomal peptide synthetase
-
doi:10.1111/j.1574-6968.2000.tb09145.x
-
Challis GL, Ravel J (2000) Coelichelin, a new peptide siderophore encoded by the Streptomyces coelicolor genome: structure prediction from the sequence of its non-ribosomal peptide synthetase. FEMS Microbiol Lett 187:111-114. doi:10.1111/j.1574-6968.2000.tb09145.x
-
(2000)
FEMS Microbiol Lett
, vol.187
, pp. 111-114
-
-
Challis, G.L.1
Ravel, J.2
-
30
-
-
26044453600
-
The first total synthesis of the Peptaibol Hypomurocin A1 and its conformation analysis: An application of the 'Azirine/Oxazolone Method'
-
doi:10.1002/cbdv. 200590084
-
Pradeille N, Zerbe O, Mohle K, Linden A, Heimgartner H (2005) The first total synthesis of the Peptaibol Hypomurocin A1 and its conformation analysis: an application of the 'Azirine/Oxazolone Method'. Chem Biodivers 2:1127-1152. doi:10.1002/cbdv. 200590084
-
(2005)
Chem Biodivers
, vol.2
, pp. 1127-1152
-
-
Pradeille, N.1
Zerbe, O.2
Mohle, K.3
Linden, A.4
Heimgartner, H.5
-
31
-
-
33846294440
-
The genomisotopic approach: A systematic method to isolate products of orphan biosynthetic gene clusters
-
doi:10.1016/j.chembiol.2006. 11.007
-
Gross H, Stockwell VO, Henkels MD, Nowak-Thompson B, Loper JE, Gerwick WH (2007) The genomisotopic approach: a systematic method to isolate products of orphan biosynthetic gene clusters. Chem Biol 14:53-63. doi:10.1016/j.chembiol. 2006. 11.007
-
(2007)
Chem Biol
, vol.14
, pp. 53-63
-
-
Gross, H.1
Stockwell, V.O.2
Henkels, M.D.3
Nowak-Thompson, B.4
Loper, J.E.5
Gerwick, W.H.6
-
32
-
-
71349085143
-
Siderophore-mediated iron acquisition in the entomopathogenic bacterium Pseudomonas entomophila L48 and its close relative Pseudomonas putida KT2440
-
doi:10.1007/s10534-009-9247-y
-
Matthijs S, Laus G, Meyer J-M, Abbaspour-Tehrani K, Schafer M, Budzikiewicz H, Cornelis P (2009) Siderophore-mediated iron acquisition in the entomopathogenic bacterium Pseudomonas entomophila L48 and its close relative Pseudomonas putida KT2440. Biometals 22:951-964. doi:10.1007/s10534-009-9247-y
-
(2009)
Biometals
, vol.22
, pp. 951-964
-
-
Matthijs, S.1
Laus, G.2
Meyer, J.-M.3
Abbaspour-Tehrani, K.4
Schafer, M.5
Budzikiewicz, H.6
Cornelis, P.7
-
33
-
-
0037036464
-
Identification of peptaibols from Trichoderma virens and cloning of a peptaibol synthetase
-
doi:10.1074/jbc.M201654200
-
Wiest A, Grzegorski D, Xu B-W, Goulard C, Rebuffat S, Ebbole DJ, Bodo B, Kenerley C (2002) Identification of peptaibols from Trichoderma virens and cloning of a peptaibol synthetase. J Biol Chem 277:20862-20868. doi:10.1074/jbc.M201654200
-
(2002)
J Biol Chem
, vol.277
, pp. 20862-20868
-
-
Wiest, A.1
Grzegorski, D.2
Xu, B.-W.3
Goulard, C.4
Rebuffat, S.5
Ebbole, D.J.6
Bodo, B.7
Kenerley, C.8
|