메뉴 건너뛰기




Volumn 4, Issue 6, 2012, Pages 604-616

Metagenome analysis reveals yet unexplored reductive dechlorinating potential of Dehalobacter sp. E1 growing in co-culture with Sedimentibacter sp.

Author keywords

[No Author keywords available]

Indexed keywords

DEHALOBACTER; DEHALOBACTER RESTRICTUS; SEDIMENTIBACTER;

EID: 84869218853     PISSN: None     EISSN: 17582229     Source Type: Journal    
DOI: 10.1111/j.1758-2229.2012.00376.x     Document Type: Article
Times cited : (60)

References (57)
  • 1
    • 0029657162 scopus 로고    scopus 로고
    • Dechlorination of PCDD/F by organic and inorganic electron transfer molecules in reduced environments
    • Adriaens, P., Chang, P.R., and Barkovskii, A.L. (1996) Dechlorination of PCDD/F by organic and inorganic electron transfer molecules in reduced environments. Chemosphere 32: 433-441.
    • (1996) Chemosphere , vol.32 , pp. 433-441
    • Adriaens, P.1    Chang, P.R.2    Barkovskii, A.L.3
  • 2
    • 78049442430 scopus 로고    scopus 로고
    • Characterizing the metabolism of Dehalococcoides with a constraint-based model
    • Ahsanul Islam, M., Edwards, E.A., and Mahadevan, R. (2010) Characterizing the metabolism of Dehalococcoides with a constraint-based model. PLoS Comput Biol 6: e1000887.
    • (2010) PLoS Comput Biol , vol.6
    • Ahsanul Islam, M.1    Edwards, E.A.2    Mahadevan, R.3
  • 5
    • 0041766196 scopus 로고    scopus 로고
    • The many faces of vitamin B12: catalysis by cobalamin-dependent enzymes
    • Banerjee, R., and Ragsdale, S.W. (2003) The many faces of vitamin B12: catalysis by cobalamin-dependent enzymes. Annu Rev Biochem 72: 209-247.
    • (2003) Annu Rev Biochem , vol.72 , pp. 209-247
    • Banerjee, R.1    Ragsdale, S.W.2
  • 6
    • 23744455645 scopus 로고    scopus 로고
    • Reductive dechlorination of beta-hexachlorocyclohexane (β-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp
    • van Doesburg, W., van Eekert, M.H., Middeldorp, P.J., Balk, M., Schraa, G., and Stams, A.J. (2005) Reductive dechlorination of beta-hexachlorocyclohexane (β-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp. FEMS Microbiol Ecol 54: 87-95.
    • (2005) FEMS Microbiol Ecol , vol.54 , pp. 87-95
    • van Doesburg, W.1    van Eekert, M.H.2    Middeldorp, P.J.3    Balk, M.4    Schraa, G.5    Stams, A.J.6
  • 7
    • 34347398474 scopus 로고    scopus 로고
    • Conversion of cobinamide into adenosylcobamide in bacteria and archaea
    • Escalante-Semerena, J.C. (2007) Conversion of cobinamide into adenosylcobamide in bacteria and archaea. J Bacteriol 189: 4555-4560.
    • (2007) J Bacteriol , vol.189 , pp. 4555-4560
    • Escalante-Semerena, J.C.1
  • 8
    • 41349099621 scopus 로고    scopus 로고
    • Biochemical and genetic bases of dehalorespiration
    • Futagami, T., Goto, M., and Furukawa, K. (2008) Biochemical and genetic bases of dehalorespiration. Chem Record 8: 1-12.
    • (2008) Chem Record , vol.8 , pp. 1-12
    • Futagami, T.1    Goto, M.2    Furukawa, K.3
  • 9
    • 33645232936 scopus 로고    scopus 로고
    • Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense
    • Gabor, K., Verissimo, C.S., Cyran, B.C., ter Horst, P., Meijer, N.P., Smidt, H., etal. (2006) Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense. J Bacteriol 188: 2604-2613.
    • (2006) J Bacteriol , vol.188 , pp. 2604-2613
    • Gabor, K.1    Verissimo, C.S.2    Cyran, B.C.3    ter Horst, P.4    Meijer, N.P.5    Smidt, H.6
  • 10
    • 58949089922 scopus 로고    scopus 로고
    • Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression
    • Gabor, K., Hailesellasse Sene, K., Smidt, H., de Vos, W.M., and van der Oost, J. (2008) Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression. Microbiology 154: 3686-3696.
    • (2008) Microbiology , vol.154 , pp. 3686-3696
    • Gabor, K.1    Hailesellasse Sene, K.2    de Smidt, H.3    van der Vos, W.M.4    Oost, J.5
  • 11
    • 33644848896 scopus 로고    scopus 로고
    • Growth of Dehalobacter and Dehalococcoides spp. during degradation of chlorinated ethanes
    • Grostern, A., and Edwards, E.A. (2006) Growth of Dehalobacter and Dehalococcoides spp. during degradation of chlorinated ethanes. Appl Environ Microbiol 72: 428-436.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 428-436
    • Grostern, A.1    Edwards, E.A.2
  • 12
    • 65549166732 scopus 로고    scopus 로고
    • Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene
    • Grostern, A., and Edwards, E.A. (2009) Characterization of a Dehalobacter coculture that dechlorinates 1, 2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene. Appl Environ Microbiol 75: 2684-2693.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 2684-2693
    • Grostern, A.1    Edwards, E.A.2
  • 13
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T.A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 14
    • 34248211608 scopus 로고    scopus 로고
    • Influence of Vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium
    • He, J., Holmes, V.F., Lee, P.K.H., and Alvarez-Cohen, L. (2007) Influence of Vitamin B12 and cocultures on the growth of Dehalococcoides isolates in defined medium. Appl Environ Microbiol 73: 2847-2853.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2847-2853
    • He, J.1    Holmes, V.F.2    Lee, P.K.H.3    Alvarez-Cohen, L.4
  • 15
    • 0031970012 scopus 로고    scopus 로고
    • Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration
    • Holliger, C., Hahn, D., Harmsen, H., Ludwig, W., Schumacher, W., Tindall, B., etal. (1998) Dehalobacter restrictus gen. nov. and sp. nov., a strictly anaerobic bacterium that reductively dechlorinates tetra- and trichloroethene in an anaerobic respiration. Arch Microbiol 169: 313-321.
    • (1998) Arch Microbiol , vol.169 , pp. 313-321
    • Holliger, C.1    Hahn, D.2    Harmsen, H.3    Ludwig, W.4    Schumacher, W.5    Tindall, B.6
  • 16
    • 0033982936 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of genes and genomes
    • Kanehisa, M., and Goto, S. (2000) KEGG: Kyoto Encyclopedia of genes and genomes. Nucleic Acids Res 28: 27-30.
    • (2000) Nucleic Acids Res , vol.28 , pp. 27-30
    • Kanehisa, M.1    Goto, S.2
  • 18
    • 84856588903 scopus 로고    scopus 로고
    • Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction
    • Kim, S.H., Harzman, C., Davis, J.K., Hutcheson, R., Broderick, J.B., Marsh, T.L., and Tiedje, J.M. (2012) Genome sequence of Desulfitobacterium hafniense DCB-2, a Gram-positive anaerobe capable of dehalogenation and metal reduction. BMC Microbiol 12: 21.
    • (2012) BMC Microbiol , vol.12 , pp. 21
    • Kim, S.H.1    Harzman, C.2    Davis, J.K.3    Hutcheson, R.4    Broderick, J.B.5    Marsh, T.L.6    Tiedje, J.M.7
  • 19
    • 0344153756 scopus 로고    scopus 로고
    • Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs
    • Korner, H., Sofia, H.J., and Zumft, W.G. (2003) Phylogeny of the bacterial superfamily of Crp-Fnr transcription regulators: exploiting the metabolic spectrum by controlling alternative gene programs. FEMS Microbiol Rev 27: 559-592.
    • (2003) FEMS Microbiol Rev , vol.27 , pp. 559-592
    • Korner, H.1    Sofia, H.J.2    Zumft, W.G.3
  • 20
    • 27144500225 scopus 로고    scopus 로고
    • Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1
    • Kube, M., Beck, A., Zinder, S.H., Kuhl, H., Reinhardt, R., and Adrian, L. (2005) Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1. Nat Biotechnol 23: 1269-1273.
    • (2005) Nat Biotechnol , vol.23 , pp. 1269-1273
    • Kube, M.1    Beck, A.2    Zinder, S.H.3    Kuhl, H.4    Reinhardt, R.5    Adrian, L.6
  • 21
    • 33845873289 scopus 로고    scopus 로고
    • Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
    • Letunic, I., and Bork, P. (2007) Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 23: 127-128.
    • (2007) Bioinformatics , vol.23 , pp. 127-128
    • Letunic, I.1    Bork, P.2
  • 22
    • 84868612185 scopus 로고    scopus 로고
    • Dehalococcoides mccartyi gen. nov., sp. nov., obligate organohalide-respiring anaerobic bacteria, relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidetes classis nov., within the phylum Chloroflexi
    • Epub ahead of print]
    • Loffler, F.E., Yan, J., Ritalahti, K.M., Adrian, L., Edwards, E.A., Konstantinidis, K.T., etal. (2012) Dehalococcoides mccartyi gen. nov., sp. nov., obligate organohalide-respiring anaerobic bacteria, relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidetes classis nov., within the phylum Chloroflexi. Int J Syst Evol Microbiol. [Epub ahead of print]
    • (2012) Int J Syst Evol Microbiol
    • Loffler, F.E.1    Yan, J.2    Ritalahti, K.M.3    Adrian, L.4    Edwards, E.A.5    Konstantinidis, K.T.6
  • 23
    • 0030854739 scopus 로고    scopus 로고
    • tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence
    • Lowe, T.M., and Eddy, S.R. (1997) tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 25: 955-964.
    • (1997) Nucleic Acids Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 24
    • 73649122427 scopus 로고    scopus 로고
    • Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides
    • McMurdie, P.J., Behrens, S.F., Müller, J.A., Göke, J., Ritalahti, K.M., Wagner, R., etal. (2009) Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides. PLoS Genet 5: e1000714.
    • (2009) PLoS Genet , vol.5
    • McMurdie, P.J.1    Behrens, S.F.2    Müller, J.A.3    Göke, J.4    Ritalahti, K.M.5    Wagner, R.6
  • 25
    • 0042530278 scopus 로고    scopus 로고
    • Characterization of the corrinoid iron-sulfur protein tetrachloroethene reductive dehalogenase of Dehalobacter restrictus
    • Maillard, J., Schumacher, W., Vazquez, F., Regeard, C., Hagen, W.R., and Holliger, C. (2003) Characterization of the corrinoid iron-sulfur protein tetrachloroethene reductive dehalogenase of Dehalobacter restrictus. Appl Environ Microbiol 69: 4628-4638.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 4628-4638
    • Maillard, J.1    Schumacher, W.2    Vazquez, F.3    Regeard, C.4    Hagen, W.R.5    Holliger, C.6
  • 26
    • 12544251874 scopus 로고    scopus 로고
    • Isolation and characterization of Tn-Dha1, a transposon containing the tetrachloroethene reductive dehalogenase of Desulfitobacterium hafniense strain TCE1
    • Maillard, J., Regeard, C., and Holliger, C. (2005) Isolation and characterization of Tn-Dha1, a transposon containing the tetrachloroethene reductive dehalogenase of Desulfitobacterium hafniense strain TCE1. Environ Microbiol 7: 107-117.
    • (2005) Environ Microbiol , vol.7 , pp. 107-117
    • Maillard, J.1    Regeard, C.2    Holliger, C.3
  • 27
    • 79961055476 scopus 로고    scopus 로고
    • Redundancy and specificity of multiple trigger factor chaperones in Desulfitobacteria
    • Maillard, J., Genevaux, P., and Holliger, C. (2011) Redundancy and specificity of multiple trigger factor chaperones in Desulfitobacteria. Microbiology 157: 2410-2421.
    • (2011) Microbiology , vol.157 , pp. 2410-2421
    • Maillard, J.1    Genevaux, P.2    Holliger, C.3
  • 28
    • 77953121577 scopus 로고    scopus 로고
    • Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide respiring bacteria
    • Maphosa, F., Vos Willem, M., and Smidt, H. (2010) Exploiting the ecogenomics toolbox for environmental diagnostics of organohalide respiring bacteria. Trends Biotechnol 28: 308-316.
    • (2010) Trends Biotechnol , vol.28 , pp. 308-316
    • Maphosa, F.1    Vos Willem, M.2    Smidt, H.3
  • 29
    • 80051716658 scopus 로고    scopus 로고
    • A Role for Dehalobacter spp. in the reductive dehalogenation of dichlorobenzenes and monochlorobenzene
    • Nelson, J.L., Fung, J.M., Cadillo-Quiroz, H., Cheng, X., and Zinder, S.H. (2011) A Role for Dehalobacter spp. in the reductive dehalogenation of dichlorobenzenes and monochlorobenzene. Environ Sci Technol 45: 6806-6813.
    • (2011) Environ Sci Technol , vol.45 , pp. 6806-6813
    • Nelson, J.L.1    Fung, J.M.2    Cadillo-Quiroz, H.3    Cheng, X.4    Zinder, S.H.5
  • 30
    • 33644854231 scopus 로고    scopus 로고
    • Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195
    • Nonaka, H., Keresztes, G., Shinoda, Y., Ikenaga, Y., Abe, M., Naito, K., etal. (2006) Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195. J Bacteriol 188: 2262-2274.
    • (2006) J Bacteriol , vol.188 , pp. 2262-2274
    • Nonaka, H.1    Keresztes, G.2    Shinoda, Y.3    Ikenaga, Y.4    Abe, M.5    Naito, K.6
  • 31
    • 0037398732 scopus 로고    scopus 로고
    • Missing genes in metabolic pathways: a comparative genomics approach
    • Osterman, A., and Overbeek, R. (2003) Missing genes in metabolic pathways: a comparative genomics approach. Curr Opin Chem Biol 7: 238-251.
    • (2003) Curr Opin Chem Biol , vol.7 , pp. 238-251
    • Osterman, A.1    Overbeek, R.2
  • 32
    • 25644458211 scopus 로고    scopus 로고
    • The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes
    • Overbeek, R., Begley, T., Butler, R.M., Choudhuri, J.V., Chuang, H.Y., Cohoon, M., etal. (2005) The subsystems approach to genome annotation and its use in the project to annotate 1000 genomes. Nucleic Acids Res 33: 5691-5702.
    • (2005) Nucleic Acids Res , vol.33 , pp. 5691-5702
    • Overbeek, R.1    Begley, T.2    Butler, R.M.3    Choudhuri, J.V.4    Chuang, H.Y.5    Cohoon, M.6
  • 33
    • 21444456620 scopus 로고    scopus 로고
    • delta p-Web, an online tool to assess composition similarity of individual nucleic acid sequences
    • van Passel, M.W.J., Luyf, A.C.M., van Kampen, A.H.C., Bart, A., and van der Ende, A. (2005a) delta p-Web, an online tool to assess composition similarity of individual nucleic acid sequences. Bioinformatics 21: 3053-3055.
    • (2005) Bioinformatics , vol.21 , pp. 3053-3055
    • van Passel, M.W.J.1    van Luyf, A.C.M.2    Kampen, A.H.C.3    van der Bart, A.4    Ende, A.5
  • 35
    • 9644265299 scopus 로고    scopus 로고
    • Regulation of anaerobic dehalorespiration by the transcriptional activator CprK
    • Pop, S.M., Kolarik, R.J., and Ragsdale, S.W. (2004) Regulation of anaerobic dehalorespiration by the transcriptional activator CprK. J Biol Chem 279: 49910-49918.
    • (2004) J Biol Chem , vol.279 , pp. 49910-49918
    • Pop, S.M.1    Kolarik, R.J.2    Ragsdale, S.W.3
  • 36
    • 0142071742 scopus 로고    scopus 로고
    • Comparative genomics of the vitamin B-12 metabolism and regulation in prokaryotes
    • Rodionov, D.A., Vitreschak, A.G., Mironov, A.A., and Gelfand, M.S. (2003) Comparative genomics of the vitamin B-12 metabolism and regulation in prokaryotes. J Biol Chem 278: 41148-41159.
    • (2003) J Biol Chem , vol.278 , pp. 41148-41159
    • Rodionov, D.A.1    Vitreschak, A.G.2    Mironov, A.A.3    Gelfand, M.S.4
  • 38
    • 28844466467 scopus 로고    scopus 로고
    • Structural characterization of novel cobalt corrinoids synthesized by enzymes of the vitamin B12 anaerobic pathway
    • Santander, P.J., Kajiwara, Y., Williams, H.J., and Scott, A.I. (2006) Structural characterization of novel cobalt corrinoids synthesized by enzymes of the vitamin B12 anaerobic pathway. Bioorg Med Chem 14: 724-731.
    • (2006) Bioorg Med Chem , vol.14 , pp. 724-731
    • Santander, P.J.1    Kajiwara, Y.2    Williams, H.J.3    Scott, A.I.4
  • 39
    • 34948904882 scopus 로고    scopus 로고
    • Pseudovitamin B(12) is the corrinoid produced by Lactobacillus reuteri CRL1098 under anaerobic conditions
    • Santos, F., Vera, J.L., Lamosa, P., de Valdez, G.F., de Vos, W.M., Santos, H., etal. (2007) Pseudovitamin B(12) is the corrinoid produced by Lactobacillus reuteri CRL1098 under anaerobic conditions. FEBS Lett 581: 4865-4870.
    • (2007) FEBS Lett , vol.581 , pp. 4865-4870
    • Santos, F.1    Vera, J.L.2    de Lamosa, P.3    de Valdez, G.F.4    Vos, W.M.5    Santos, H.6
  • 40
    • 0029664484 scopus 로고    scopus 로고
    • The proton/electron ration of the menaquinone-dependent electron transport from dihydrogen to tetrachloroethene in Dehalobacter restrictus
    • Schumacher, W., and Holliger, C. (1996) The proton/electron ration of the menaquinone-dependent electron transport from dihydrogen to tetrachloroethene in Dehalobacter restrictus. J Bacteriol 178: 2328-2333.
    • (1996) J Bacteriol , vol.178 , pp. 2328-2333
    • Schumacher, W.1    Holliger, C.2
  • 41
    • 0030805828 scopus 로고    scopus 로고
    • Redox chemistry of cobalamin and iron-sulfur cofactors in the tetrachloroethene reductase of Dehalobacter restrictus
    • Schumacher, W., Holliger, C., Zehnder, A.J., and Hagen, W.R. (1997) Redox chemistry of cobalamin and iron-sulfur cofactors in the tetrachloroethene reductase of Dehalobacter restrictus. FEBS Lett 409: 421-425.
    • (1997) FEBS Lett , vol.409 , pp. 421-425
    • Schumacher, W.1    Holliger, C.2    Zehnder, A.J.3    Hagen, W.R.4
  • 42
    • 19944426081 scopus 로고    scopus 로고
    • Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes
    • Seshadri, R., Adrian, L., Fouts, D.E., Eisen, J.A., Phillippy, A.M., Methe, B.A., etal. (2005) Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Science 307: 105-108.
    • (2005) Science , vol.307 , pp. 105-108
    • Seshadri, R.1    Adrian, L.2    Fouts, D.E.3    Eisen, J.A.4    Phillippy, A.M.5    Methe, B.A.6
  • 43
    • 84863564535 scopus 로고    scopus 로고
    • Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9 T) and comparison to Dehalococcoides strains
    • Siddaramappa, S., Challacombe, J.F., Delano, S.F., Green, L.D., Daligault, H., Bruce, D., etal. (2012) Complete genome sequence of Dehalogenimonas lykanthroporepellens type strain (BL-DC-9 T) and comparison to Dehalococcoides strains. Stand Genomic Sci 6: 251-264.
    • (2012) Stand Genomic Sci , vol.6 , pp. 251-264
    • Siddaramappa, S.1    Challacombe, J.F.2    Delano, S.F.3    Green, L.D.4    Daligault, H.5    Bruce, D.6
  • 44
    • 9244251590 scopus 로고    scopus 로고
    • Anaerobic microbial dehalogenation
    • Smidt, H., and de Vos, W.M. (2004) Anaerobic microbial dehalogenation. Annu Rev Microbiol 58: 43-73.
    • (2004) Annu Rev Microbiol , vol.58 , pp. 43-73
    • Smidt, H.1    de Vos, W.M.2
  • 45
    • 0033814296 scopus 로고    scopus 로고
    • Transcriptional regulation of the cpr gene cluster in ortho-chlorophenol-respiring Desulfitobacterium dehalogenans
    • Smidt, H., van Leest, M., van der Oost, J., and de Vos, W.M. (2000) Transcriptional regulation of the cpr gene cluster in ortho-chlorophenol-respiring Desulfitobacterium dehalogenans. J Bacteriol 182: 5683-5691.
    • (2000) J Bacteriol , vol.182 , pp. 5683-5691
    • Smidt, H.1    van Leest, M.2    van der Oost, J.3    de Vos, W.M.4
  • 47
    • 77954149529 scopus 로고    scopus 로고
    • The little bacteria that can - diversity, genomics and ecophysiology of 'Dehalococcoides' spp. in contaminated environments
    • Taş, N., Van Eekert, M.H.A., De Vos, W.M., and Smidt, H. (2010) The little bacteria that can - diversity, genomics and ecophysiology of 'Dehalococcoides' spp. in contaminated environments. Microbial Biotechnology 3: 389-402.
    • (2010) Microbial Biotechnology , vol.3 , pp. 389-402
    • Taş, N.1    Van Eekert, M.H.A.2    De Vos, W.M.3    Smidt, H.4
  • 48
    • 4143110165 scopus 로고    scopus 로고
    • Purification, cloning, and sequencing of a 3,5-dichlorophenol reductive dehalogenase from Desulfitobacterium frappieri PCP-1
    • Thibodeau, J., Gauthier, A., Duguay, M., Villemur, R., Lepine, F., Juteau, P., and Beaudet, R. (2004) Purification, cloning, and sequencing of a 3, 5-dichlorophenol reductive dehalogenase from Desulfitobacterium frappieri PCP-1. Appl Environ Microbiol 70: 4532-4537.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4532-4537
    • Thibodeau, J.1    Gauthier, A.2    Duguay, M.3    Villemur, R.4    Lepine, F.5    Juteau, P.6    Beaudet, R.7
  • 49
    • 47749126600 scopus 로고    scopus 로고
    • The mosaic genome of Anaeromyxobacter dehalogenans strain 2CP-C suggests an aerobic common ancestor to the Delta-Proteobacteria
    • Thomas, S.H., Wagner, R.D., Arakaki, A.K., Skolnick, J., Kirby, J.R., Shimkets, L.J., etal. (2008) The mosaic genome of Anaeromyxobacter dehalogenans strain 2CP-C suggests an aerobic common ancestor to the Delta-Proteobacteria. PLoS ONE 3: e2103.
    • (2008) PLoS ONE , vol.3
    • Thomas, S.H.1    Wagner, R.D.2    Arakaki, A.K.3    Skolnick, J.4    Kirby, J.R.5    Shimkets, L.J.6
  • 50
    • 0027968068 scopus 로고
    • Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J.D., Higgins, D.G., and Gibson, T.J. (1994) Clustal-W - improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 51
    • 25144514365 scopus 로고    scopus 로고
    • Molecular analysis of Desulfitobacterium frappieri PCP-1 involved in reductive dehalogenation of pentachlorophenol
    • Villemur, R., Beaudet, R., Lanthier, M., Gauthier, A., Boyer, A., Thibodeau, J., etal. (2005) Molecular analysis of Desulfitobacterium frappieri PCP-1 involved in reductive dehalogenation of pentachlorophenol. Water Sci Technol 52: 101-106.
    • (2005) Water Sci Technol , vol.52 , pp. 101-106
    • Villemur, R.1    Beaudet, R.2    Lanthier, M.3    Gauthier, A.4    Boyer, A.5    Thibodeau, J.6
  • 53
    • 0343486006 scopus 로고
    • Mechanisms of reductive dehalogenation by transition-metal cofactors found in anaerobic-bacteria
    • Wackett, L.P., and Schanke, C.A. (1992) Mechanisms of reductive dehalogenation by transition-metal cofactors found in anaerobic-bacteria. Met Ions Biol Syst 28: 329-356.
    • (1992) Met Ions Biol Syst , vol.28 , pp. 329-356
    • Wackett, L.P.1    Schanke, C.A.2
  • 54
    • 84861217829 scopus 로고    scopus 로고
    • Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae
    • Wagner, D.D., Hug, L.A., Hatt, J.K., Spitzmiller, M.A., Padilla-Crespo, E., Ritalahti, K.M., etal. (2012) Genomic determinants of organohalide-respiration in Geobacter lovleyi, an unusual member of the Geobacteraceae. BMC Genomics 13: 200.
    • (2012) BMC Genomics , vol.13 , pp. 200
    • Wagner, D.D.1    Hug, L.A.2    Hatt, J.K.3    Spitzmiller, M.A.4    Padilla-Crespo, E.5    Ritalahti, K.M.6
  • 55
    • 0030428346 scopus 로고    scopus 로고
    • Isolation of an anaerobic bacterium which reductively dechlorinates tetrachloroethene and trichloroethene
    • Wild, A., Hermann, R., and Leisinger, T. (1996) Isolation of an anaerobic bacterium which reductively dechlorinates tetrachloroethene and trichloroethene. Biodegradation 7: 507-511.
    • (1996) Biodegradation , vol.7 , pp. 507-511
    • Wild, A.1    Hermann, R.2    Leisinger, T.3
  • 57
    • 64749101213 scopus 로고    scopus 로고
    • A novel Dehalobacter species is involved in extensive 4,5,6,7-tetrachlorophthalide dechlorination
    • Yoshida, N., Ye, L., Baba, D., and Katayama, A. (2009) A novel Dehalobacter species is involved in extensive 4, 5, 6, 7-tetrachlorophthalide dechlorination. Appl Environ Microbiol 75: 2400-2405.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 2400-2405
    • Yoshida, N.1    Ye, L.2    Baba, D.3    Katayama, A.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.