메뉴 건너뛰기




Volumn 40, Issue 20, 2012, Pages 10532-10542

The structural basis of differential DNA sequence recognition by restriction-modification controller proteins

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; CONTROLLER PROTEIN; METHYLTRANSFERASE; RESTRICTION ENDONUCLEASE; UNCLASSIFIED DRUG;

EID: 84869044885     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gks718     Document Type: Article
Times cited : (18)

References (27)
  • 1
    • 0242353167 scopus 로고    scopus 로고
    • Maintenance of species identity and controlling speciation of bacteria: A new function for restriction/ modification systems
    • Jeltsch, A. (2003) Maintenance of species identity and controlling speciation of bacteria: a new function for restriction/ modification systems? Gene, 317, 13-16
    • (2003) Gene , vol.317 , pp. 13-16
    • Jeltsch, A.1
  • 2
    • 0026338873 scopus 로고
    • Restriction and modification systems
    • Wilson, G.G. and Murray, N.E. (1991) Restriction and modification systems. Ann. Rev. Genet., 25, 585-627.
    • (1991) Ann. Rev. Genet. , vol.25 , pp. 585-627
    • Wilson, G.G.1    Murray, N.E.2
  • 3
    • 0026087311 scopus 로고
    • A family of regulatory genes associated with type II restriction- modification systems
    • Tao, T., Bourne, J.C. and Blumenthal, R.M. (1991) A family of regulatory genes associated with type II restriction-modification systems. J. Bacteriol., 173, 1367-1375.
    • (1991) J. Bacteriol. , vol.173 , pp. 1367-1375
    • Tao, T.1    Bourne, J.C.2    Blumenthal, R.M.3
  • 4
    • 0026526202 scopus 로고
    • Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis
    • Ives, C.L., Nathan, P.D. and Brooks, J.E. (1992) Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis. J. Bacteriol., 174, 7194-7201.
    • (1992) J. Bacteriol. , vol.174 , pp. 7194-7201
    • Ives, C.L.1    Nathan, P.D.2    Brooks, J.E.3
  • 5
    • 0029030933 scopus 로고
    • The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system
    • Rimseliene, R., Vaisvila, R. and Janulaitis, A. (1995) The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system. Gene, 157, 217-219.
    • (1995) Gene , vol.157 , pp. 217-219
    • Rimseliene, R.1    Vaisvila, R.2    Janulaitis, A.3
  • 6
    • 0033988985 scopus 로고    scopus 로고
    • Role and mechanism of action of C•PvuII, a regulatory protein conserved among restriction-modification systems
    • Vijesurier, R.M., Carlock, L., Blumenthal, R.M. and Dunbar, J.C. (2000) Role and mechanism of action of C•PvuII, a regulatory protein conserved among restriction-modification systems. J. Bacteriol., 182, 477-487.
    • (2000) J. Bacteriol. , vol.182 , pp. 477-487
    • Vijesurier, R.M.1    Carlock, L.2    Blumenthal, R.M.3    Dunbar, J.C.4
  • 7
    • 0037437368 scopus 로고    scopus 로고
    • Esp1396I restriction-modification system: Structural organization and mode of regulation
    • Cesnaviciene, E., Mitkaite, G., Stankevicius, K., Janulaitis, A. and Lubys, A. (2003) Esp1396I restriction-modification system: structural organization and mode of regulation. Nucleic Acids Res., 31, 743-749.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 743-749
    • Cesnaviciene, E.1    Mitkaite, G.2    Stankevicius, K.3    Janulaitis, A.4    Lubys, A.5
  • 8
    • 11844250013 scopus 로고    scopus 로고
    • Nature of the promoter activated by C. PvuII, an unusual regulatory protein conserved among restriction-modification systems
    • Knowle, D., Lintner, R.E., Touma, Y.M. and Blumenthal, R.M. (2005) Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems. J. Bacteriol., 187, 488-497.
    • (2005) J. Bacteriol. , vol.187 , pp. 488-497
    • Knowle, D.1    Lintner, R.E.2    Touma, Y.M.3    Blumenthal, R.M.4
  • 10
    • 43349095997 scopus 로고    scopus 로고
    • Real-time kinetics of restriction-modification gene expression after entry into a new host cell
    • Mruk, I. and Blumenthal, R.M. (2008) Real-time kinetics of restriction-modification gene expression after entry into a new host cell. Nucleic Acids Res., 36, 2581-2593.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 2581-2593
    • Mruk, I.1    Blumenthal, R.M.2
  • 11
    • 49249132732 scopus 로고    scopus 로고
    • Structural analysis of the genetic switch that regulates the expression of restriction-modification genes
    • McGeehan, J.E., Streeter, S.D., Thresh, S.J., Ball, N., Ravelli, R.B. and Kneale, G.G. (2008) Structural analysis of the genetic switch that regulates the expression of restriction-modification genes. Nucleic Acids Res., 36, 4778-4787.
    • (2008) Nucleic Acids Res. , vol.36 , pp. 4778-4787
    • McGeehan, J.E.1    Streeter, S.D.2    Thresh, S.J.3    Ball, N.4    Ravelli, R.B.5    Kneale, G.G.6
  • 12
    • 13444269482 scopus 로고    scopus 로고
    • DNA footprinting and biophysical characterisation of the controller protein C. AhdI suggests the basis of a genetic switch
    • Streeter, S.D., Papapanagiotou, I., McGeehan, J.E. and Kneale, G.G. (2004) DNA footprinting and biophysical characterisation of the controller protein C.AhdI suggests the basis of a genetic switch. Nucleic Acids Res., 32, 6445-6453.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 6445-6453
    • Streeter, S.D.1    Papapanagiotou, I.2    McGeehan, J.E.3    Kneale, G.G.4
  • 13
    • 33646105382 scopus 로고    scopus 로고
    • Cooperative binding of the C. AhdI controller protein to the C/R promoter and its role in endonuclease gene expression
    • McGeehan, J.E., Papapanagiotou, I., Streeter, S.D. and Kneale, G.G. (2006) Cooperative binding of the C.AhdI controller protein to the C/R promoter and its role in endonuclease gene expression. J. Mol. Biol., 358, 523-531.
    • (2006) J. Mol. Biol. , vol.358 , pp. 523-531
    • McGeehan, J.E.1    Papapanagiotou, I.2    Streeter, S.D.3    Kneale, G.G.4
  • 14
    • 13844281073 scopus 로고    scopus 로고
    • High-resolution crystal structure of the restriction-modification controller protein C. AhdI from Aeromonas hydrophila
    • McGeehan, J.E., Streeter, S., Papapanagiotou, I., Fox, G.C. and Kneale, G.G. (2005) High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila. J. Mol. Biol., 346, 689-701.
    • (2005) J. Mol. Biol. , vol.346 , pp. 689-701
    • McGeehan, J.E.1    Streeter, S.2    Papapanagiotou, I.3    Fox, G.C.4    Kneale, G.G.5
  • 16
    • 59649126997 scopus 로고    scopus 로고
    • Systematic prediction of control proteins and their DNA binding sites
    • Sorokin, V., Severinov, K. and Gelfand, M.S. (2009) Systematic prediction of control proteins and their DNA binding sites. Nucleic Acids Res., 37, 441-451.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 441-451
    • Sorokin, V.1    Severinov, K.2    Gelfand, M.S.3
  • 17
    • 84861365933 scopus 로고    scopus 로고
    • Recognition of dual symmetry by the controller protein C. Es. 1396I based on the structure of the transcriptional activation complex
    • McGeehan, J., Ball, N.J., Streeter, S.D., Thresh, S.-J. and Kneale, G.G. (2012) Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex. Nucleic. Acids Res., 40, 4158-4167.
    • (2012) Nucleic. Acids Res. , vol.40 , pp. 4158-4167
    • McGeehan, J.1    Ball, N.J.2    Streeter, S.D.3    Thresh, S.-J.4    Kneale, G.G.5
  • 19
    • 0027879008 scopus 로고
    • Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
    • Kabsch, W. (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr., 26, 795-800.
    • (1993) J. Appl. Crystallogr. , vol.26 , pp. 795-800
    • Kabsch, W.1
  • 26
    • 36749088056 scopus 로고    scopus 로고
    • Regulatory circuit based on autogenous activation-repression: Roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system
    • Mruk, I., Rajesh, P. and Blumenthal, R.M. (2007) Regulatory circuit based on autogenous activation-repression: roles of C-boxes and spacer sequences in control of the PvuII restriction-modification system. Nucleic Acids Res., 35, 6935-6952.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 6935-6952
    • Mruk, I.1    Rajesh, P.2    Blumenthal, R.M.3
  • 27
    • 1442274756 scopus 로고    scopus 로고
    • Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition
    • Vistica, J., Dam, J., Balbo, A., Yikilmaz, E., Mariuzza, R.A., Rouault, T.A. and Schuck, P. (2004) Sedimentation equilibrium analysis of protein interactions with global implicit mass conservation constraints and systematic noise decomposition. Anal. Biochem., 326, 234-256.
    • (2004) Anal. Biochem. , vol.326 , pp. 234-256
    • Vistica, J.1    Dam, J.2    Balbo, A.3    Yikilmaz, E.4    Mariuzza, R.A.5    Rouault, T.A.6    Schuck, P.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.