-
1
-
-
0000536073
-
On the mechanism of the development of multipledrug-resistant clones of Shigella
-
Akiba, T., Koyama, K., Ishiki, Y., Kimura, S. and Fukushima, T. (1960) On the mechanism of the development of multipledrug-resistant clones of Shigella. Jpn. J. Microbiol, 4, 219-227.
-
(1960)
Jpn. J. Microbiol
, vol.4
, pp. 219-227
-
-
Akiba, T.1
Koyama, K.2
Ishiki, Y.3
Kimura, S.4
Fukushima, T.5
-
2
-
-
0026338873
-
Restriction and modification systems
-
Wilson, G.G. and Murray, N.E. (1991) Restriction and modification systems. Annu. Rev. Genetics, 25, 585-627. (Pubitemid 21903734)
-
(1991)
Annual Review of Genetics
, vol.25
, Issue.1
, pp. 585-627
-
-
Wilson, G.G.1
Murray, N.E.2
-
3
-
-
0026087311
-
A family of regulatory genes associated with type II restriction- modification systems
-
Tao, T., Bourne, J.C. and Blumenthal, R.M. (1991) A family of regulatory genes associated with type II restriction-modification systems. J. Bacteriol, 173, 1367-1375.
-
(1991)
J. Bacteriol
, vol.173
, pp. 1367-1375
-
-
Tao, T.1
Bourne, J.C.2
Blumenthal, R.M.3
-
4
-
-
0026526202
-
Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis
-
Ives, C.L., Nathan, P.D. and Brooks, J.E. (1992) Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis. J. Bacteriol., 174, 7194-7201.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7194-7201
-
-
Ives, C.L.1
Nathan, P.D.2
Brooks, J.E.3
-
5
-
-
0029030933
-
The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system
-
Rimseliene, R., Vaisvila, R. and Janulaitis, A. (1995) The eco72IC gene specifies a trans-acting factor which influences expression of both DNA methyltransferase and endonuclease from the Eco72I restriction-modification system. Gene, 157, 217-219.
-
(1995)
Gene
, vol.157
, pp. 217-219
-
-
Rimseliene, R.1
Vaisvila, R.2
Janulaitis, A.3
-
6
-
-
0033988985
-
Role and mechanism of action of C × PvuII, a regulatory protein conserved among restriction-modification systems
-
DOI 10.1128/JB.182.2.477-487.2000
-
Vijesurier, R.M., Carlock, L., Blumenthal, R.M. and Dunbar, J.C. (2000) Role and mechanism of action of CvuII, a regulatory protein conserved among restriction-modification systems. J. Bacteriol, 182, 477-487. (Pubitemid 30030134)
-
(2000)
Journal of Bacteriology
, vol.182
, Issue.2
, pp. 477-487
-
-
Vijesurier, R.M.1
Carlock, L.2
Blumenthal, R.M.3
Dunbar, J.C.4
-
7
-
-
0037437368
-
Esp13961 restriction-modification system: Structural organization and mode of regulation
-
DOI 10.1093/nar/gkg135
-
Cesnaviciene, E., Mitkaite, G., Stankevicius, K., Janulaitis, A. and Lubys, A. (2003) Esp1396I restriction-modification system: structural organization and mode of regulation. Nucleic Acids Res, 31, 743-749. (Pubitemid 36181493)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.2
, pp. 743-749
-
-
Cesnaviciene, E.1
Mitkaite, G.2
Stankevicius, K.3
Janulaitis, A.4
Lubys, A.5
-
8
-
-
11844250013
-
Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems
-
DOI 10.1128/JB.187.2.488-497.2005
-
Knowle, D., Lintner, R.E., Touma, Y.M. and Blumenthal, R.M. (2005) Nature of the promoter activated by C.PvuII, an unusual regulatory protein conserved among restriction-modification systems. J. Bacteriol, 187, 488-497. (Pubitemid 40096237)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.2
, pp. 488-497
-
-
Knowle, D.1
Lintner, R.E.2
Tourna, Y.M.3
Blumenthal, R.M.4
-
9
-
-
41149103531
-
Transcription regulation of the type II restriction-modification system AhdI
-
DOI 10.1093/nar/gkm1116
-
Bogdanova, E., Djordjevic, M., Papapanagiotou, I., Heyduk, T., Kneale, G. and Severinov, K. (2008) Transcription regulation of the type II restriction-modification system AhdI. Nucleic Acids Res, 36, 1429-1442. (Pubitemid 351426097)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.5
, pp. 1429-1442
-
-
Bogdanova, E.1
Djordjevic, M.2
Papapanagiotou, I.3
Heyduk, T.4
Kneale, G.5
Severinov, K.6
-
10
-
-
43349095997
-
Real-time kinetics of restriction-modification gene expression after entry into a new host cell
-
DOI 10.1093/nar/gkn097
-
Mruk, I. and Blumenthal, R.M. (2008) Real-time kinetics of restriction-modification gene expression after entry into a new host cell. Nucleic Acids Res, 36, 2581-2593. (Pubitemid 351659573)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.8
, pp. 2581-2593
-
-
Mruk, I.1
Blumenthal, R.M.2
-
11
-
-
49249132732
-
Structural analysis of the genetic switch that regulates the expression of restriction-modification genes
-
McGeehan, J.E., Streeter, S.D., Thresh, S.J., Ball, N., Ravelli, R.B. and Kneale, G.G. (2008) Structural analysis of the genetic switch that regulates the expression of restriction-modification genes. Nucleic Acids Res, 36, 4778-4787.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 4778-4787
-
-
McGeehan, J.E.1
Streeter, S.D.2
Thresh, S.J.3
Ball, N.4
Ravelli, R.B.5
Kneale, G.G.6
-
12
-
-
13444269482
-
DNA footprinting and biophysical characterization of the controller protein C.Ahdl suggests the basis of a genetic switch
-
DOI 10.1093/nar/gkh975
-
Streeter, S.D., Papapanagiotou, I., McGeehan, J.E. and Kneale, G.G. (2004) DNA footprinting and biophysical characterisation of the controller protein C.AhdI suggests the basis of a genetic switch. Nucleic Acids Res, 32, 6445-6453. (Pubitemid 40202103)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.21
, pp. 6445-6453
-
-
Streeter, S.D.1
Papapanagiotou, I.2
McGeehan, J.E.3
Kneale, G.G.4
-
13
-
-
33646105382
-
Cooperative binding of the C.AhdI controller protein to the C/R promoter and its role in endonuclease gene expression
-
McGeehan, J.E., Papapanagiotou, I., Streeter, S.D. and Kneale, G.G. (2006) Cooperative binding of the C.AhdI controller protein to the C/R promoter and its role in endonuclease gene expression. J. Mol. Biol, 358, 523-531.
-
(2006)
J. Mol. Biol
, vol.358
, pp. 523-531
-
-
McGeehan, J.E.1
Papapanagiotou, I.2
Streeter, S.D.3
Kneale, G.G.4
-
14
-
-
34250312038
-
DNA structural deformations in the interaction of the controller protein C.AhdI with its operator sequence
-
DOI 10.1093/nar/gkm129
-
Papapanagiotou, I., Streeter, S.D., Cary, P.D. and Kneale, G.G. (2007) DNA structural deformations in the interaction of the controller protein C.AhdI with its operator sequence. Nucleic Acids Res, 35, 2643-2650. (Pubitemid 47073677)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.8
, pp. 2643-2650
-
-
Papapanagiotou, I.1
Streeter, S.D.2
Cary, P.D.3
Kneale, G.G.4
-
15
-
-
13844281073
-
High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila
-
DOI 10.1016/j.jmb.2004.12.025
-
McGeehan, J.E., Streeter, S., Papapanagiotou, I., Fox, G.C. and Kneale, G.G. (2005) High-resolution crystal structure of the restriction-modification controller protein C.AhdI from Aeromonas hydrophila. J. Mol. Biol, 346, 689-701. (Pubitemid 40247711)
-
(2005)
Journal of Molecular Biology
, vol.346
, Issue.3
, pp. 689-701
-
-
McGeehan, J.E.1
Streeter, S.D.2
Papapanagiotou, I.3
Fox, G.C.4
Kneale, G.G.5
-
16
-
-
67249085515
-
Transcription regulation of restriction-modification system Esp1396I
-
Bogdanova, E., Zakharova, M., Streeter, S., Taylor, J., Heyduk, T., Kneale, G. and Severinov, K. (2009) Transcription regulation of restriction-modification system Esp1396I. Nucleic Acids Res, 37, 3354-3366.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 3354-3366
-
-
Bogdanova, E.1
Zakharova, M.2
Streeter, S.3
Taylor, J.4
Heyduk, T.5
Kneale, G.6
Severinov, K.7
-
17
-
-
0027879008
-
Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants
-
Kabsch, W. (1993) Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr., 26, 795-800.
-
(1993)
J. Appl. Crystallogr.
, vol.26
, pp. 795-800
-
-
Kabsch, W.1
-
18
-
-
23844546311
-
Likelihood-enhanced fast translation functions
-
DOI 10.1107/S0907444905001617
-
McCoy, A.J., Grosse-Kunstleve, R.W., Storoni, L.C. and Read, R.J. (2005) Likelihood-enhanced fast translation functions. Acta Crystallogr., 61, 458-464. (Pubitemid 43934606)
-
(2005)
Acta Crystallographica Section D: Biological Crystallography
, vol.61
, Issue.4
, pp. 458-464
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Storoni, L.C.3
Read, R.J.4
-
19
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
DOI 10.1107/S0907444996012255
-
Murshudov, G.N., Vagin, A.A. and Dodson, E.J. (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr., 53, 240-255. (Pubitemid 27235885)
-
(1997)
Acta Crystallographica Section D: Biological Crystallography
, vol.53
, Issue.3
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
21
-
-
69949171652
-
Structure of the restriction-modification controller protein C.Esp1396I
-
Ball, N., Streeter, S., Kneale, G.G. and McGeehan, J. (2009) Structure of the restriction-modification controller protein C.Esp1396I. Acta Crystallogr., D65, 900-905.
-
(2009)
Acta Crystallogr.
, vol.D65
, pp. 900-905
-
-
Ball, N.1
Streeter, S.2
Kneale, G.G.3
McGeehan, J.4
-
22
-
-
70450261721
-
Conformational analysis of nucleic acids revisited: Curves+
-
Lavery, R., Moakher, M., Maddocks, J.H., Petkeviciute, D. and Zakrzewska, K. (2009) Conformational analysis of nucleic acids revisited: curves+. Nucleic Acids Res., 37, 5917-5929.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 5917-5929
-
-
Lavery, R.1
Moakher, M.2
Maddocks, J.H.3
Petkeviciute, D.4
Zakrzewska, K.5
-
23
-
-
0035850731
-
A standard reference frame for the description of nucleic acid base-pair geometry
-
DOI 10.1006/jmbi.2001.4987
-
Olson, W.K., Bansal, M., Burley, S.K., Dickerson, R.E., Gerstein, M., Harvey, S.C., Heinemann, U., Lu, X.-J., Neidle, S., Shakked, Z. et al. (2001) A standard reference frame for the description of nucleic acid base-pair geometry. J. Mol. Biol., 313, 229-237. (Pubitemid 33001177)
-
(2001)
Journal of Molecular Biology
, vol.313
, Issue.1
, pp. 229-237
-
-
Olson, W.K.1
Bansal, M.2
Burley, S.K.3
Dickerson, R.E.4
Gerstein, M.5
Harvey, S.C.6
Heinemann, U.7
Lu, X.-J.8
Neidle, S.9
Shakked, Z.10
Sklenar, H.11
Suzuki, M.12
Tung, C.-S.13
Westhof, E.14
Wolberger, C.15
Berman, H.M.16
-
25
-
-
0025009802
-
Protein-DNA conformational changes in the crystal structure of a lambda Cro-operator complex
-
Brennan, R.G., Roderick, S.L., Takeda, Y. and Matthews, B.W. (1990) Protein-DNA conformational changes in the crystal structure of a lambda Cro-operator complex. Proc. Natl Acad. Sci. USA, 87, 8165-8169.
-
(1990)
Proc. Natl Acad. Sci. USA
, vol.87
, pp. 8165-8169
-
-
Brennan, R.G.1
Roderick, S.L.2
Takeda, Y.3
Matthews, B.W.4
-
26
-
-
0032479329
-
Crystal structure of "-Cro bound to a consensus operator at 3.0 Aå resolution
-
DOI 10.1006/jmbi.1998.1848
-
Albright, R.A. and Matthews, B.W. (1998) Crystal structure of lambda-Cro bound to a consensus operator at 3.0 A resolution. J. Mol. Biol, 280, 137-151. (Pubitemid 28312812)
-
(1998)
Journal of Molecular Biology
, vol.280
, Issue.1
, pp. 137-151
-
-
Albright, R.A.1
Matthews, B.W.2
-
27
-
-
0036500260
-
Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR
-
DOI 10.1093/emboj/21.5.1210
-
Schumacher, M.A., Miller, M.C., Grkovic, S., Brown, M.H., Skurray, R.A. and Brennan, R.G. (2002) Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR. EMBO J, 21, 1210-1218. (Pubitemid 34206194)
-
(2002)
EMBO Journal
, vol.21
, Issue.5
, pp. 1210-1218
-
-
Schumacher, M.A.1
Miller, M.C.2
Grkovic, S.3
Brown, M.H.4
Skurray, R.A.5
Brennan, R.G.6
-
28
-
-
0026657433
-
Refined 1.8 A crystal structure of the lambda repressor-operator complex
-
Beamer, L.J. and Pabo, C.O. (1992) Refined 1.8 A crystal structure of the lambda repressor-operator complex. J. Mol. Biol., 227, 177-196.
-
(1992)
J. Mol. Biol.
, vol.227
, pp. 177-196
-
-
Beamer, L.J.1
Pabo, C.O.2
-
29
-
-
1642441938
-
Structure of a Ternary Transcription Activation Complex
-
DOI 10.1016/S1097-2765(03)00483-0
-
Jain, D., Nickels, B.E., Sun, L., Hochschild, A. and Darst, S.A. (2004) Structure of a ternary transcription activation complex. Mol. Cell, 13, 45-53. (Pubitemid 38117114)
-
(2004)
Molecular Cell
, vol.13
, Issue.1
, pp. 45-53
-
-
Jain, D.1
Nickels, B.E.2
Sun, L.3
Hochschild, A.4
Darst, S.A.5
-
30
-
-
59649126997
-
Systematic prediction of control proteins and their DNA binding sites
-
Sorokin, V., Severinov, K. and Gelfand, M.S. (2009) Systematic prediction of control proteins and their DNA binding sites. Nucleic Acids Res., 37, 441-451.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 441-451
-
-
Sorokin, V.1
Severinov, K.2
Gelfand, M.S.3
|