-
1
-
-
79952031276
-
Multiple comparisons/testing issues
-
in Lin S, Zhao H (eds) Berlin Springer
-
Zhang Q, Ott J: Multiple comparisons/testing issues; in Lin S, Zhao H (eds): Handbook on Analyzing Human Genetic Data: Computational Approaches and Software. Berlin, Springer, 2009, vol 1, pp 277-287.
-
(2009)
Handbook on Analyzing Human Genetic Data: Computational Approaches and Software
, vol.1
, pp. 277-287
-
-
Zhang, Q.1
Ott, J.2
-
2
-
-
0034781050
-
A simple correction for multiple comparisons in interval mapping genome scans
-
DOI 10.1046/j.1365-2540.2001.00901.x
-
Cheverud JM: A simple correction for multiple comparisons in interval mapping genome scans. Heredity 2001; 87: 52-58. (Pubitemid 32974332)
-
(2001)
Heredity
, vol.87
, Issue.1
, pp. 52-58
-
-
Cheverud, J.M.1
-
3
-
-
1842539516
-
A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other
-
DOI 10.1086/383251
-
Nyholt DR: A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other. Am J Hum Genet 2004; 74: 765-769. (Pubitemid 38420107)
-
(2004)
American Journal of Human Genetics
, vol.74
, Issue.4
, pp. 765-769
-
-
Nyholt, D.R.1
-
4
-
-
78650405375
-
Discovering the false discovery rate
-
Benjamini Y: Discovering the false discovery rate. J R Statist Soc B 2010; 72: 405-416.
-
(2010)
J R Statist Soc B
, vol.72
, pp. 405-416
-
-
Benjamini, Y.1
-
5
-
-
0025066941
-
More powerful procedures for multiple significance testing
-
Hochberg Y, Benjamini Y: More powerful procedures for multiple significance testing. Stat Med 1990; 9: 811-818. (Pubitemid 20343989)
-
(1990)
Statistics in Medicine
, vol.9
, Issue.7
, pp. 811-818
-
-
Hochberg, Y.1
Benjamini, Y.2
-
6
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
DOI 10.1214/aos/1013699998
-
Benjamini Y, Yekutieli D: The control of the false discovery rate in multiple testing under dependency. Ann Statist 2001; 29: 1165-1188. (Pubitemid 33575263)
-
(2001)
Annals of Statistics
, vol.29
, Issue.4
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
8
-
-
2142732441
-
Large-Scale Simultaneous Hypothesis Testing: The Choice of a Null Hypothesis
-
Efron B: Large-scale simultaneous hypothesis testing: the choice of a null hypothesis. J Am Stat Assoc 2004; 99: 96-104. (Pubitemid 38545197)
-
(2004)
Journal of the American Statistical Association
, vol.99
, Issue.465
, pp. 96-104
-
-
Efron, B.1
-
10
-
-
72449170109
-
An introduction to recursive partitioning: Rationale application and characteristics of classification and regression trees bagging and random forests
-
Strobl C, Malley J, Tutz G: An introduction to recursive partitioning: rationale, application, and characteristics of classification and regression trees, bagging, and random forests. Psychol Methods 2009; 14: 323-348.
-
(2009)
Psychol Methods
, vol.14
, pp. 323-348
-
-
Strobl, C.1
Malley, J.2
Tutz, G.3
-
11
-
-
0034703870
-
Sequence variability and candidate gene analysis in complex disease: Association of mu opioid receptor gene variation with substance dependence
-
Hoehe MR, Kopke K, Wendel B, Rohde K, Flachmeier C, Kidd KK, Berrettini WH, Church GM: Sequence variability and candidate gene analysis in complex disease: association of mu opioid receptor gene variation with substance dependence. Hum Mol Genet 2000; 9: 2895-2908.
-
(2000)
Hum Mol Genet
, vol.9
, pp. 2895-2908
-
-
Hoehe, M.R.1
Kopke, K.2
Wendel, B.3
Rohde, K.4
Flachmeier, C.5
Kidd, K.K.6
Berrettini, W.H.7
Church, G.M.8
-
12
-
-
2942573099
-
Statistical significance for hierarchical clustering in genetic association and microarray expression studies
-
Levenstien MA, Yang Y, Ott J: Statistical significance for hierarchical clustering in genetic association and microarray expression studies. BMC Bioinformatics 2003; 4: 62.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 62
-
-
Levenstien, M.A.1
Yang, Y.2
Ott, J.3
-
13
-
-
70350292450
-
Isotonic inference for populations related to the uniform distribution
-
Chotai J: Isotonic inference for populations related to the uniform distribution. Commun Statist Theory Methods 1983; 12: 2109-2118.
-
(1983)
Commun Statist Theory Methods
, vol.12
, pp. 2109-2118
-
-
Chotai, J.1
-
14
-
-
0003843308
-
-
ed 3. Boca Raton, FL Chapman and Hall/CRC
-
Manly BFJ: Randomization, Bootstrap, and Monte Carlo Methods in Biology, ed 3. Boca Raton, FL, Chapman and Hall/CRC, 2007.
-
(2007)
Randomization, Bootstrap, and Monte Carlo Methods in Biology
-
-
Manly, B.F.J.1
-
15
-
-
79959241413
-
Genomic inflation factors under polygenic inheritance
-
Yang J, Weedon MN, Purcell S, Lettre G, Estrada K, Willer CJ, Smith AV, Ingelsson E, O'Connell JR, Mangino M, Mägi R, Madden PA, Heath AC, Nyholt DR, Martin NG, Montgomery GW, Frayling TM, Hirschhorn JN, McCarthy MI, Goddard ME, Visscher PM, GIANT Consortium: Genomic inflation factors under polygenic inheritance. Eur J Hum Genet 2011; 19: 807-812.
-
(2011)
Eur J Hum Genet
, vol.19
, pp. 807-812
-
-
Yang, J.1
Weedon, M.N.2
Purcell, S.3
Lettre, G.4
Estrada, K.5
Willer, C.J.6
Smith, A.V.7
Ingelsson, E.8
O'Connell, J.R.9
Mangino, M.10
Mägi, R.11
Madden, P.A.12
Heath, A.C.13
Nyholt, D.R.14
Martin, N.G.15
Montgomery, G.W.16
Frayling, T.M.17
Hirschhorn, J.N.18
McCarthy, M.I.19
Goddard, M.E.20
Visscher, P.M.21
Consortium, G.22
more..
-
16
-
-
33751011889
-
HTRA1 promoter polymorphism in wet age-related macular degeneration
-
DOI 10.1126/science.1133807
-
Dewan A, Liu M, Hartman S, Zhang SS, Liu DT, Zhao C, Tam PO, Chan WM, Lam DS, Snyder M, Barnstable C, Pang CP, Hoh J: HTR1 promoter polymorphism in wet agerelated macular degeneration. Science 2006; 314: 989-992. (Pubitemid 44749943)
-
(2006)
Science
, vol.314
, Issue.5801
, pp. 989-992
-
-
DeWan, A.1
Liu, M.2
Hartman, S.3
Zhang, S.S.-M.4
Liu, D.T.L.5
Zhao, C.6
Tam, P.O.S.7
Chan, W.M.8
Lam, D.S.C.9
Snyder, M.10
Barnstable, C.11
Pang, C.P.12
Hoh, J.13
-
17
-
-
68449086236
-
Common polygenic variation contributes to risk of schizophrenia and bipolar disorder
-
Purcell SM, Wray NR, Stone JL, Visscher PM, O'Donovan MC, Sullivan PF, Sklar P: Common polygenic variation contributes to risk of schizophrenia and bipolar disorder. Nature 2009; 460: 748-752.
-
(2009)
Nature
, vol.460
, pp. 748-752
-
-
Purcell, S.M.1
Wray, N.R.2
Stone, J.L.3
Visscher, P.M.4
O'Donovan, M.C.5
Sullivan, P.F.6
Sklar, P.7
-
18
-
-
33749667345
-
Genome-wide genotyping in Parkinson's disease and neurologically normal controls: First stage analysis and public release of data
-
DOI 10.1016/S1474-4422(06)70578-6, PII S1474442206705786
-
Fung HC, Scholz S, Matarin M, Simon-Sanchez J, Hernandez D, Britton A, Gibbs JR, Langefeld C, Stiegert ML, Schymick J, Okun MS, Mandel RJ, Fernandez HH, Foote KD, Rodriguez RL, Peckham E, De Vrieze FW, Gwinn-Hardy K, Hardy JA, Singleton A: Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data. Lancet Neurol 2006; 5: 911-916. (Pubitemid 44556544)
-
(2006)
Lancet Neurology
, vol.5
, Issue.11
, pp. 911-916
-
-
Fung, H.-C.1
Scholz, S.2
Matarin, M.3
Simon-Sanchez, J.4
Hernandez, D.5
Britton, A.6
Gibbs, J.R.7
Langefeld, C.8
Stiegert, M.L.9
Schymick, J.10
Okun, M.S.11
Mandel, R.J.12
Fernandez, H.H.13
Foote, K.D.14
Rodriguez, R.L.15
Peckham, E.16
De Vrieze, F.W.17
Gwinn-Hardy, K.18
Hardy, J.A.19
Singleton, A.20
more..
-
19
-
-
33745051114
-
High-density SNP analysis of 642 Caucasian families with rheumatoid arthritis identifies two new linkage regions on 11p12 and 2q33
-
DOI 10.1038/sj.gene.6364295, PII 6364295
-
Amos CI, Chen WV, Lee A, Li W, Kern M, Lundsten R, Batliwalla F, Wener M, Remmers E, Kastner DA, Criswell LA, Seldin MF, Gregersen PK: High-density SNP analysis of Caucasian families with rheumatoid arthritis identifies two new linkage regions on 11p12 and 2q33. Genes Immun 2006; 7: 277-286. (Pubitemid 43871528)
-
(2006)
Genes and Immunity
, vol.7
, Issue.4
, pp. 277-286
-
-
Amos, C.I.1
Chen, W.V.2
Lee, A.3
Li, W.4
Kern, M.5
Lundsten, R.6
Batliwalla, F.7
Wener, M.8
Remmers, E.9
Kastner, D.A.10
Criswell, L.A.11
Seldin, M.F.12
Gregersen, P.K.13
-
20
-
-
77952382817
-
Genome-wide examination of genetic variants associated with response to platinum-based chemotherapy in patients with small-cell lung cancer
-
Wu C, Xu B, Yuan P, Ott J, Guan Y, Liu Y, Liu Z, Shen Y, Yu D, Lin D: Genome-wide examination of genetic variants associated with response to platinum-based chemotherapy in patients with small-cell lung cancer. Pharmacogenet Genomics 2010; 20: 389-395.
-
(2010)
Pharmacogenet Genomics
, vol.20
, pp. 389-395
-
-
Wu, C.1
Xu, B.2
Yuan, P.3
Ott, J.4
Guan, Y.5
Liu, Y.6
Liu, Z.7
Shen, Y.8
Yu, D.9
Lin, D.10
-
21
-
-
40849142336
-
Genotype patterns that contribute to increased risk for or protection from developing heroin addiction
-
DOI 10.1038/sj.mp.4002147, PII 4002147
-
Nielsen DA, Ji F, Yuferov V, Ho A, Chen A, Levran O, Ott J, Kreek MJ: Genotype patterns that contribute to increased risk for or protection from developing heroin addiction. Mol Psychiatry 2008; 13: 417-428. (Pubitemid 351399824)
-
(2008)
Molecular Psychiatry
, vol.13
, Issue.4
, pp. 417-428
-
-
Nielsen, D.A.1
Ji, F.2
Yuferov, V.3
Ho, A.4
Chen, A.5
Levran, O.6
Ott, J.7
Kreek, M.J.8
-
22
-
-
0035214299
-
Trimming, weighting, and grouping SNPs in human case-control association studies
-
DOI 10.1101/gr.204001
-
Hoh J, Wille A, Ott J: Trimming, weighting, and grouping SNPS in human case-control association studies. Genome Res 2001; 11: 2115-2119. (Pubitemid 33138809)
-
(2001)
Genome Research
, vol.11
, Issue.12
, pp. 2115-2119
-
-
Hoh, J.1
Wille, A.2
Ott, J.3
-
23
-
-
0042881041
-
Mathematical multi-locus approaches to localizing complex human trait genes
-
DOI 10.1038/nrg1155
-
Hoh J, Ott J: Mathematical multi-locus approaches to localizing complex human trait genes. Nat Rev Genet 2003; 4: 701-709. (Pubitemid 37046137)
-
(2003)
Nature Reviews Genetics
, vol.4
, Issue.9
, pp. 701-709
-
-
Hoh, J.1
Ott, J.2
-
24
-
-
0035829361
-
Controlling the false discovery rate in behavior genetics research
-
DOI 10.1016/S0166-4328(01)00297-2, PII S0166432801002972
-
Benjamini Y, Drai D, Elmer G, Kafkafi N, Golani I: Controlling the false discovery rate in behavior genetics research. Behav Brain Res 2001; 125: 279-284. (Pubitemid 33000466)
-
(2001)
Behavioural Brain Research
, vol.125
, Issue.1-2
, pp. 279-284
-
-
Benjamini, Y.1
Drai, D.2
Elmer, G.3
Kafkafi, N.4
Golani, I.5
-
25
-
-
0037187833
-
A mixture model approach for the analysis of microarray gene expression data
-
Allison DB, Gadbury GL, Heo M, Fernandez JR, Lee C-K, Prolla TA, Weindruch R: A mixture model approach for the analysis of microarray gene expression data. Comput Stat Data An 2002; 39: 1-20.
-
(2002)
Comput Stat Data An
, vol.39
, pp. 1-20
-
-
Allison, D.B.1
Gadbury, G.L.2
Heo, M.3
Fernandez, J.R.4
Lee, C.-K.5
Prolla, T.A.6
Weindruch, R.7
-
26
-
-
34848837945
-
A moment-based method for estimating the proportion of true null hypotheses and its application to microarray gene expression data
-
DOI 10.1093/biostatistics/kxm002
-
Lai Y: A moment-based method for estimating the proportion of true null hypotheses and its application to microarray gene expression data. Biostatistics 2007; 8: 744-755. (Pubitemid 47511801)
-
(2007)
Biostatistics
, vol.8
, Issue.4
, pp. 744-755
-
-
Lai, Y.1
-
27
-
-
77954133026
-
Estimation of effect size distribution from genome-wide association studies and implications for future discoveries
-
Park JH, Wacholder S, Gail MH, Peters U, Jacobs KB, Chanock SJ, Chatterjee N: Estimation of effect size distribution from genome-wide association studies and implications for future discoveries. Nat Genet 2010; 42: 570-575.
-
(2010)
Nat Genet
, vol.42
, pp. 570-575
-
-
Park, J.H.1
Wacholder, S.2
Gail, M.H.3
Peters, U.4
Jacobs, K.B.5
Chanock, S.J.6
Chatterjee, N.7
-
28
-
-
0021748268
-
Segregation analysis of schizophrenia and related disorders
-
Risch N, Baron M: Segregation analysis of schizophrenia and related disorders. Am J Hum Genet 1984; 36: 1039-1059. (Pubitemid 15205735)
-
(1984)
American Journal of Human Genetics
, vol.36
, Issue.5
, pp. 1039-1059
-
-
Risch, N.1
Baron, M.2
-
29
-
-
0025019555
-
Linkage strategies for genetically complex traits I. Multilocus models
-
Risch N: Linkage strategies for genetically complex traits. I. Multilocus models. Am J Hum Genet 1990; 46: 222-228.
-
(1990)
Am J Hum Genet
, vol.46
, pp. 222-228
-
-
Risch, N.1
-
30
-
-
42349088634
-
Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia
-
DOI 10.1126/science.1155174
-
Walsh T, McClellan JM, McCarthy SE, Addington AM, Pierce SB, Cooper GM, Nord AS, Kusenda M, Malhotra D, Bhandari A, Stray SM, Rippey CF, Roccanova P, Makarov V, Lakshmi B, Findling RL, Sikich L, Stromberg T, Merriman B, Gogtay N, Butler P, Eckstrand K, Noory L, Gochman P, Long R, Chen Z, Davis S, Baker C, Eichler EE, Meltzer PS, Nelson SF, Singleton AB, Lee MK, Rapoport JL, King MC, Sebat J: Rare structural variants disrupt multiple genes in neurodevelopmental pathways in schizophrenia. Science 2008; 320: 539-543. (Pubitemid 351590668)
-
(2008)
Science
, vol.320
, Issue.5875
, pp. 539-543
-
-
Walsh, T.1
McClellan, J.M.2
McCarthy, S.E.3
Addington, A.M.4
Pierce, S.B.5
Cooper, G.M.6
Nord, A.S.7
Kusenda, M.8
Malhotra, D.9
Bhandari, A.10
Stray, S.M.11
Rippey, C.F.12
Roccanova, P.13
Makarov, V.14
Lakshmi, B.15
Findling, R.L.16
Sikich, L.17
Stromberg, T.18
Merriman, B.19
Gogtay, N.20
Butler, P.21
Eckstrand, K.22
Noory, L.23
Gochman, P.24
Long, R.25
Chen, Z.26
Davis, S.27
Baker, C.28
Eichler, E.E.29
Meltzer, P.S.30
Nelson, S.F.31
Singleton, A.B.32
Lee, M.K.33
Rapoport, J.L.34
King, M.-C.35
Sebat, J.36
more..
|