-
1
-
-
48249095920
-
Single-strand break repair and genetic disease
-
Caldecott, K. W. (2008) Single-strand break repair and genetic disease Nat. Rev. Genet. 9, 619-631
-
(2008)
Nat. Rev. Genet.
, vol.9
, pp. 619-631
-
-
Caldecott, K.W.1
-
2
-
-
38049112778
-
Early steps in the DNA base excision/single-strand interruption repair pathway in mammalian cells
-
Hegde, M. L., Hazra, T. K., and Mitra, S. (2008) Early steps in the DNA base excision/single-strand interruption repair pathway in mammalian cells Cell Res. 18, 27-47
-
(2008)
Cell Res.
, vol.18
, pp. 27-47
-
-
Hegde, M.L.1
Hazra, T.K.2
Mitra, S.3
-
3
-
-
0037115910
-
Dynamics and diversions in base excision DNA repair of oxidized abasic lesions
-
Demple, B. and DeMott, M. S. (2002) Dynamics and diversions in base excision DNA repair of oxidized abasic lesions Oncogene 21, 8926-8934
-
(2002)
Oncogene
, vol.21
, pp. 8926-8934
-
-
Demple, B.1
Demott, M.S.2
-
4
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
Lindahl, T. (1993) Instability and decay of the primary structure of DNA Nature 362, 709-715
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
5
-
-
63349107052
-
Structural studies of type i topoisomerases
-
Baker, N. M., Rajan, R., and Mondragon, A. (2009) Structural studies of type I topoisomerases Nucleic Acids Res. 37, 693-701
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 693-701
-
-
Baker, N.M.1
Rajan, R.2
Mondragon, A.3
-
6
-
-
0032836651
-
Initiation of base excision repair: Glycosylase mechanisms and structures
-
McCullough, A. K., Dodson, M. L., and Lloyd, R. S. (1999) Initiation of base excision repair: Glycosylase mechanisms and structures Annu. Rev. Biochem. 68, 255-285
-
(1999)
Annu. Rev. Biochem.
, vol.68
, pp. 255-285
-
-
McCullough, A.K.1
Dodson, M.L.2
Lloyd, R.S.3
-
7
-
-
0028604392
-
Transcription bypass or blockage at single-strand breaks on the DNA template strand: Effect of different 3′ and 5′ flanking groups on the T7 RNA polymerase elongation complex
-
Zhou, W. and Doetsch, P. W. (1994) Transcription bypass or blockage at single-strand breaks on the DNA template strand: Effect of different 3′ and 5′ flanking groups on the T7 RNA polymerase elongation complex Biochemistry 33, 14926-14934
-
(1994)
Biochemistry
, vol.33
, pp. 14926-14934
-
-
Zhou, W.1
Doetsch, P.W.2
-
8
-
-
0027165306
-
Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases
-
Zhou, W. and Doetsch, P. W. (1993) Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases Proc. Natl. Acad. Sci. U.S.A. 90, 6601-6605
-
(1993)
Proc. Natl. Acad. Sci. U.S.A.
, vol.90
, pp. 6601-6605
-
-
Zhou, W.1
Doetsch, P.W.2
-
9
-
-
2442504817
-
Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts
-
Kathe, S. D., Shen, G. P., and Wallace, S. S. (2004) Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts J. Biol. Chem. 279, 18511-18520
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 18511-18520
-
-
Kathe, S.D.1
Shen, G.P.2
Wallace, S.S.3
-
10
-
-
0029160260
-
T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation
-
Zhou, W., Reines, D., and Doetsch, P. W. (1995) T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation Cell 82, 577-585
-
(1995)
Cell
, vol.82
, pp. 577-585
-
-
Zhou, W.1
Reines, D.2
Doetsch, P.W.3
-
11
-
-
0030478013
-
Template strand gap bypass is a general property of prokaryotic RNA polymerases: Implications for elongation mechanisms
-
Liu, J. and Doetsch, P. W. (1996) Template strand gap bypass is a general property of prokaryotic RNA polymerases: Implications for elongation mechanisms Biochemistry 35, 14999-15008
-
(1996)
Biochemistry
, vol.35
, pp. 14999-15008
-
-
Liu, J.1
Doetsch, P.W.2
-
12
-
-
59149094751
-
8-Oxoguanine DNA glycosylase (Ogg1) causes a transcriptional inactivation of damaged DNA in the absence of functional Cockayne syndrome B (Csb) protein
-
Khobta, A. 2009, 8-Oxoguanine DNA glycosylase (Ogg1) causes a transcriptional inactivation of damaged DNA in the absence of functional Cockayne syndrome B (Csb) protein DNA Repair 8, 309-317
-
(2009)
DNA Repair
, vol.8
, pp. 309-317
-
-
Khobta, A.1
-
13
-
-
79961209184
-
8-Oxo-7,8-dihydroguanine in DNA does not constitute a barrier to transcription, but is converted into transcription-blocking damage by OGG1
-
Kitsera, N. 2011, 8-Oxo-7,8-dihydroguanine in DNA does not constitute a barrier to transcription, but is converted into transcription-blocking damage by OGG1 Nucleic Acids Res. 39, 5926-5934
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 5926-5934
-
-
Kitsera, N.1
-
14
-
-
33748990904
-
Transcription arrest at an abasic site in the transcribed strand of template DNA
-
Tornaletti, S., Maeda, L. S., and Hanawalt, P. C. (2006) Transcription arrest at an abasic site in the transcribed strand of template DNA Chem. Res. Toxicol. 19, 1215-1220
-
(2006)
Chem. Res. Toxicol.
, vol.19
, pp. 1215-1220
-
-
Tornaletti, S.1
Maeda, L.S.2
Hanawalt, P.C.3
-
15
-
-
0037378557
-
Transcription-dependent degradation of topoisomerase I-DNA covalent complexes
-
Desai, S. D. 2003, Transcription-dependent degradation of topoisomerase I-DNA covalent complexes Mol. Cell. Biol. 23, 2341-2350
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 2341-2350
-
-
Desai, S.D.1
-
16
-
-
0025335205
-
Camptothecin-stabilized topoisomerase I-DNA adducts cause premature termination of transcription
-
Bendixen, C. 1990, Camptothecin-stabilized topoisomerase I-DNA adducts cause premature termination of transcription Biochemistry 29, 5613-5619
-
(1990)
Biochemistry
, vol.29
, pp. 5613-5619
-
-
Bendixen, C.1
-
17
-
-
0030658833
-
Processing of topoisomerase i cleavable complexes into DNA damage by transcription
-
Wu, J. and Liu, L. F. (1997) Processing of topoisomerase I cleavable complexes into DNA damage by transcription Nucleic Acids Res. 25, 4181-4186
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4181-4186
-
-
Wu, J.1
Liu, L.F.2
-
18
-
-
0029947168
-
The anti-cancer drug camptothecin inhibits elongation but stimulates initiation of RNA polymerase II transcription
-
Ljungman, M. and Hanawalt, P. C. (1996) The anti-cancer drug camptothecin inhibits elongation but stimulates initiation of RNA polymerase II transcription Carcinogenesis 17, 31-35
-
(1996)
Carcinogenesis
, vol.17
, pp. 31-35
-
-
Ljungman, M.1
Hanawalt, P.C.2
-
19
-
-
77955981960
-
Mouse CSB protein is important for gene expression in the presence of a single-strand break in the non-transcribed DNA strand
-
Khobta, A. 2010, Mouse CSB protein is important for gene expression in the presence of a single-strand break in the non-transcribed DNA strand DNA Repair 9, 985-993
-
(2010)
DNA Repair
, vol.9
, pp. 985-993
-
-
Khobta, A.1
-
20
-
-
77649254580
-
Abasic sites and strand breaks in DNA cause transcriptional mutagenesis in Escherichia coli
-
Clauson, C. L. 2010, Abasic sites and strand breaks in DNA cause transcriptional mutagenesis in Escherichia coli Proc. Natl. Acad. Sci. U.S.A. 107, 3657-3662
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 3657-3662
-
-
Clauson, C.L.1
-
21
-
-
0032828689
-
Repair of radiation-induced DNA strand breaks does not occur preferentially in transcriptionally active DNA
-
Ljungman, M. (1999) Repair of radiation-induced DNA strand breaks does not occur preferentially in transcriptionally active DNA Radiat. Res. 152, 444-449
-
(1999)
Radiat. Res.
, vol.152
, pp. 444-449
-
-
Ljungman, M.1
-
22
-
-
0034673558
-
Gene-specific repair of γ-ray-induced DNA strand breaks in colon cancer cells: No coupling to transcription and no removal from the mitochondrial genome
-
May, A. and Bohr, V. A. (2000) Gene-specific repair of γ-ray-induced DNA strand breaks in colon cancer cells: No coupling to transcription and no removal from the mitochondrial genome Biochem. Biophys. Res. Commun. 269, 433-437
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.269
, pp. 433-437
-
-
May, A.1
Bohr, V.A.2
-
23
-
-
2442590835
-
Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli
-
Bregeon, D. 2003, Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli Mol. Cell 12, 959-970
-
(2003)
Mol. Cell
, vol.12
, pp. 959-970
-
-
Bregeon, D.1
-
24
-
-
57749121608
-
8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells
-
Saxowsky, T. T. 2008, 8-Oxoguanine-mediated transcriptional mutagenesis causes Ras activation in mammalian cells Proc. Natl. Acad. Sci. U.S.A. 105, 18877-18882
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 18877-18882
-
-
Saxowsky, T.T.1
-
25
-
-
80053215162
-
DNA slip-outs cause RNA polymerase II arrest in vitro: Potential implications for genetic instability
-
Salinas-Rios, V., Belotserkovskii, B. P., and Hanawalt, P. C. (2011) DNA slip-outs cause RNA polymerase II arrest in vitro: Potential implications for genetic instability Nucleic Acids Res. 39, 7444-7454
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 7444-7454
-
-
Salinas-Rios, V.1
Belotserkovskii, B.P.2
Hanawalt, P.C.3
-
26
-
-
36148968944
-
A triplex-forming sequence from the human c-MYC promoter interferes with DNA transcription
-
Belotserkovskii, B. P. 2007, A triplex-forming sequence from the human c-MYC promoter interferes with DNA transcription J. Biol. Chem. 282, 32433-32441
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 32433-32441
-
-
Belotserkovskii, B.P.1
-
27
-
-
1342302799
-
The structural basis of the transition from initiation to elongation phases of transcription, as well as translocation and strand separation, by T7 RNA polymerase
-
Steitz, T. A. (2004) The structural basis of the transition from initiation to elongation phases of transcription, as well as translocation and strand separation, by T7 RNA polymerase Curr. Opin. Struct. Biol. 14, 4-9
-
(2004)
Curr. Opin. Struct. Biol.
, vol.14
, pp. 4-9
-
-
Steitz, T.A.1
-
28
-
-
0034721946
-
T7 RNA polymerase elongation complex structure and movement
-
Huang, J. and Sousa, R. (2000) T7 RNA polymerase elongation complex structure and movement J. Mol. Biol. 303, 347-358
-
(2000)
J. Mol. Biol.
, vol.303
, pp. 347-358
-
-
Huang, J.1
Sousa, R.2
-
29
-
-
54949100000
-
The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation
-
Durniak, K. J., Bailey, S., and Steitz, T. A. (2008) The structure of a transcribing T7 RNA polymerase in transition from initiation to elongation Science 322, 553-557
-
(2008)
Science
, vol.322
, pp. 553-557
-
-
Durniak, K.J.1
Bailey, S.2
Steitz, T.A.3
-
30
-
-
81855199965
-
Importance of steric effects on the efficiency and fidelity of transcription by T7 RNA polymerase
-
Ulrich, S. and Kool, E. T. (2011) Importance of steric effects on the efficiency and fidelity of transcription by T7 RNA polymerase Biochemistry 50, 10343-10349
-
(2011)
Biochemistry
, vol.50
, pp. 10343-10349
-
-
Ulrich, S.1
Kool, E.T.2
-
31
-
-
0027469856
-
Effects of DNA lesions on transcription elongation by T7 RNA polymerase
-
Chen, Y. H. and Bogenhagen, D. F. (1993) Effects of DNA lesions on transcription elongation by T7 RNA polymerase J. Biol. Chem. 268, 5849-5855
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 5849-5855
-
-
Chen, Y.H.1
Bogenhagen, D.F.2
-
32
-
-
80054015954
-
Structure of human mitochondrial RNA polymerase
-
Ringel, R. 2011, Structure of human mitochondrial RNA polymerase Nature 478, 269-273
-
(2011)
Nature
, vol.478
, pp. 269-273
-
-
Ringel, R.1
-
33
-
-
84860716543
-
Repair of persistent strand breaks in the mitochondrial genome
-
Sykora, P., Wilson, D. M., and Bohr, V. A. (2012) Repair of persistent strand breaks in the mitochondrial genome Mech. Ageing Dev. 133, 169-175
-
(2012)
Mech. Ageing Dev.
, vol.133
, pp. 169-175
-
-
Sykora, P.1
Wilson, D.M.2
Bohr, V.A.3
|