ATHB4 and HAT3, two class II HD-ZIP transcription factors, control leaf development in Arabidopsis

Plant Signaling and Behavior

Volumn 7, Issue 11, 2012, Pages 1382-1387

  Bou Torrent, Jordi ^a   Salla Martret, Mercè ^a   Brandt, Ronny ^b   Musielak, Thomas ^b   Palauqui, Jean Christophe ^c   Martínez García, Jaime F ^a,d   Wenkel, Stephan ^b  

^a CSIC   (Spain)

^b UNIVERSITY OF TÜBINGEN   (Germany)

^c INSTITUT JEAN PIERRE BOURGIN   (France)

^d INSTITUCIÓ CATALANA DE RECERCA I ESTUDIS AVANÇATS ICREA   (Spain)

Author keywords

Arabidopsis thaliana; Auxin; HD ZIPII; HD ZIPIII; Leaf development; Shade avoidance

Indexed keywords

ARABIDOPSIS PROTEIN; HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-4, ARABIDOPSIS; HOMEODOMAIN PROTEIN; TRANSCRIPTION FACTOR;

ARABIDOPSIS; COTYLEDON; GENE EXPRESSION REGULATION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; PHYSIOLOGY; PLANT LEAF; TRANSGENIC PLANT;

ARABIDOPSIS; ARABIDOPSIS PROTEINS; COTYLEDON; GENE EXPRESSION REGULATION, PLANT; GENETICS; GROWTH AND DEVELOPMENT; HOMEODOMAIN PROTEINS; METABOLISM; PHYSIOLOGY; PLANT LEAVES; PLANTS, GENETICALLY MODIFIED; TRANSCRIPTION FACTORS;

EID: 84868533281     PISSN: 15592316     EISSN: 15592324     Source Type: Journal    
DOI: 10.4161/psb.21824     Document Type: Article

References (29)

1. Ballaré CL. Keeping up with the neighbours: phytochrome sensing and other signalling mechanisms. Trends Plant Sci 1999; 4:97-102; PMID:10322540; http://dx.doi.org/10.1016/S1360-1385(99)01383-7.
2. Franklin KA. Shade avoidance. New Phytol 2008; 179:930-44; PMID:18537892; http://dx.doi. org/10.1111/j.1469-8137.2008.02507.x.
3. Martinez-Garcia JF, Galstyan A, Salla-Martret M, Cifuentes-Esquivel N, Gallemi M, Bou-Torrent J. Regulatory Components of Shade Avoidance Syndrome. Advances in Botanical Research 2010; 53:65-116; http://dx.doi.org/10.1016/S0065-2296(10)53003-9.
4. Ballaré CL, Scopel AL, Sánchez RA. Far-red radiation reflected from adjacent leaves: an early signal of competition in plant canopies. Science 1990; 247:329-32; PMID:17735851; http://dx.doi.org/10.1126/science. 247.4940.329.
5. Li L, Ljung K, Breton G, Schmitz RJ, Pruneda-Paz J, Cowing-Zitron C, et al. Linking photoreceptor excitation to changes in plant architecture. Genes Dev 2012; 26:785-90; PMID:22508725; http://dx.doi. org/10.1101/gad.187849.112.
6. Roig-Villanova I, Bou-Torrent J, Galstyan A, Carretero-Paulet L, Portolés S, Rodríguez-Concepción M, et al. Interaction of shade avoidance and auxin responses: a role for two novel atypical bHLH proteins. EMBO J 2007; 26:4756-67; PMID:17948056; http://dx.doi. org/10.1038/sj.emboj.7601890.
7. Hornitschek P, Kohnen MV, Lorrain S, Rougemont J, Ljung K, López-Vidriero I, et al. Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling. Plant J 2012; In Press; PMID:22536829; http://dx.doi. org/10.1111/j.1365-313X.2012.05033.x.
8. Sessa G, Carabelli M, Sassi M, Ciolfi A, Possenti M, Mittempergher F, et al. A dynamic balance between gene activation and repression regulates the shade avoidance response in Arabidopsis. Genes Dev 2005; 19:2811-5; PMID:16322556; http://dx.doi. org/10.1101/gad.364005.
9. Tao Y, Ferrer JL, Ljung K, Pojer F, Hong FX, Long JA, et al. Rapid synthesis of auxin via a new tryptophandependent pathway is required for shade avoidance in plants. Cell 2008; 133:164-76; PMID:18394996; http://dx.doi.org/10.1016/j.cell.2008.01.049.
10. Sorin C, Salla-Martret M, Bou-Torrent J, Roig-Villanova I, Martínez-García JF. ATHB4, a regulator of shade avoidance, modulates hormone response in Arabidopsis seedlings. Plant J 2009; 59:266-77; PMID:19392702; http://dx.doi.org/10.1111/j.1365-313X.2009.03866.x.
11. Roig-Villanova I, Bou J, Sorin C, Devlin PF, Martínez-García JF. Identification of primary target genes of phytochrome signaling. Early transcriptional control during shade avoidance responses in Arabidopsis. Plant Physiol 2006; 141:85-96; PMID:16565297; http://dx.doi.org/10.1104/pp.105.076331.
12. Ariel FD, Manavella PA, Dezar CA, Chan RL. The true story of the HD-Zip family. Trends Plant Sci 2007; 12:419-26; PMID:17698401; http://dx.doi. org/10.1016/j.tplants.2007.08.003.
13. Ciarbelli AR, Ciolfi A, Salvucci S, Ruzza V, Possenti M, Carabelli M, et al. The Arabidopsis homeodomainleucine zipper II gene family: diversity and redundancy. Plant Mol Biol 2008; 68:465-78; PMID:18758690; http://dx.doi.org/10.1007/s11103-008-9383-8.
14. Zúñiga-Mayo VM, Marsch-Martínez N, de Folter S. JAIBA, a class-II HD-ZIP transcription factor involved in the regulation of meristematic activity, and important for correct gynoecium and fruit development in Arabidopsis. Plant J 2012; 71:314-26; PMID:22409594; http://dx.doi.org/10.1111/j.1365-313X.2012.04990.x.
15. Brandt R, Salla-Martret M, Bou-Torrent J, Musielak T, Stahl M, Lanz C, et al. Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses. Plant J 2012; In press; PMID:22578006; http://dx.doi. org/10.1111/j.1365-313X.2012.05049.x.
16. Carlsbecker A, Lee JY, Roberts CJ, Dettmer J, Lehesranta S, Zhou J, et al. Cell signalling by microRNA165/6 directs gene dose-dependent root cell fate. Nature 2010; 465:316-21; PMID:20410882; http://dx.doi.org/10.1038/nature08977.
17. McConnell JR, Emery J, Eshed Y, Bao N, Bowman J, Barton MK. Role of PHABULOSA and PHAVOLUTA in determining radial patterning in shoots. Nature 2001; 411:709-13; PMID:11395776; http://dx.doi. org/10.1038/35079635.
18. Smith ZR, Long JA. Control of Arabidopsis apicalbasal embryo polarity by antagonistic transcription factors. Nature 2010; 464:423-6; PMID:20190735; http://dx.doi.org/10.1038/nature08843.
19. Morelli G, Ruberti I. Light and shade in the photocontrol of Arabidopsis growth. Trends Plant Sci 2002; 7:399-404; PMID:12234731; http://dx.doi. org/10.1016/S1360-1385(02)02314-2.
20. Kagale S, Links MG, Rozwadowski K. Genome-wide analysis of ethylene-responsive element binding factorassociated amphiphilic repression motif-containing transcriptional regulators in Arabidopsis. Plant Physiol 2010; 152:1109-34; PMID:20097792; http://dx.doi. org/10.1104/pp.109.151704.
21. Sawa S, Ohgishi M, Goda H, Higuchi K, Shimada Y, Yoshida S, et al. The HAT2 gene, a member of the HD-Zip gene family, isolated as an auxin inducible gene by DNA microarray screening, affects auxin response in Arabidopsis. Plant J 2002; 32:1011-22; PMID:12492842; http://dx.doi.org/10.1046/j.1365-313X.2002.01488.x.
22. Ohgishi M, Oka A, Morelli G, Ruberti I, Aoyama T. Negative autoregulation of the Arabidopsis homeobox gene ATHB-2. Plant J 2001; 25:389-98; PMID:11260495; http://dx.doi.org/10.1046/j.1365-313x.2001.00966.x.
23. Steindler C, Matteucci A, Sessa G, Weimar T, Ohgishi M, Aoyama T, et al. Shade avoidance responses are mediated by the ATHB-2 HD-zip protein, a negative regulator of gene expression. Development 1999; 126:4235-45; PMID:10477292.
24. Wenkel S, Emery J, Hou B-H, Evans MMS, Barton MK. A feedback regulatory module formed by LITTLE ZIPPER and HD-ZIPIII genes. Plant Cell 2007; 19:3379-90; PMID:18055602; http://dx.doi. org/10.1105/tpc.107.055772.
25. Schena M, Lloyd AM, Davis RW. The HAT4 gene of Arabidopsis encodes a developmental regulator. Genes Dev 1993; 7:367-79; PMID:8449400; http://dx.doi. org/10.1101/gad.7.3.367.
26. Wuyts N, Palauqui J-C, Conejero G, Verdeil J-L, Granier C, Massonnet C. High-contrast three-dimensional imaging of the Arabidopsis leaf enables the analysis of cell dimensions in the epidermis and mesophyll. Plant Methods 2010; 6:17; PMID:20598116; http://dx.doi.org/10.1186/1746-4811-6-17.
27. Truernit E, Bauby H, Dubreucq B, Grandjean O, Runions J, Barthélémy J, et al. High-resolution wholemount imaging of three-dimensional tissue organization and gene expression enables the study of Phloem development and structure in Arabidopsis. Plant Cell 2008; 20:1494-503; PMID:18523061; http://dx.doi. org/10.1105/tpc.107.056069.
28. Truernit E, Palauqui J-C. Looking deeper: wholemount confocal imaging of plant tissue for the accurate study of inner tissue layers. Plant Signal Behav 2009; 4:151-2; PMID:19649197; http://dx.doi.org/10.4161/psb.4.2.7683.
29. Rosset A, Spadola L, Ratib O. OsiriX: an opensource software for navigating in multidimensional DICOM images. J Digit Imaging 2004; 17:205-16; PMID:15534753; http://dx.doi.org/10.1007/s10278-004-1014-6.