The HAT2 gene, a member of the HD-Zip gene family, isolated as an auxin inducible gene by DNA microarray screening, affects auxin response in Arabidopsis

Plant Journal

Volumn 32, Issue 6, 2002, Pages 1011-1022

  Sawa, Shinichiro ^a   Ohgishi, Maki ^b   Goda, Hideki ^b   Higuchi, Kanako ^c   Shimada, Yukihisa ^b   Yoshida, Shigeo ^b   Koshiba, Tomokazu ^c  

^a UNIVERSITY OF TOKYO   (Japan)

^b Elements Chemistry Laboratory   (Japan)

^c TOKYO METROPOLITAN UNIVERSITY   (Japan)

Author keywords

Arabidopsis; Auxin; HAT2; HD Zip II; Microarray; Signal transduction

Indexed keywords

ACETIC ACID; BIOCHEMISTRY; DNA; GENES; HORMONES; RNA;

TRANSCRIPTION FACTORS;

PLANTS (BOTANY);

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; BLOTTING, NORTHERN; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENE EXPRESSION REGULATION, PLANT; HOMEODOMAIN PROTEINS; INDOLEACETIC ACIDS; LEUCINE ZIPPERS; MOLECULAR SEQUENCE DATA; NAPHTHALENEACETIC ACIDS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHENOTYPE; PLANT GROWTH REGULATORS; PLANT ROOTS; PLANT SHOOTS; PLANTS, GENETICALLY MODIFIED; SEQUENCE HOMOLOGY, AMINO ACID; SIGNAL TRANSDUCTION; TRANSCRIPTION, GENETIC;

ARABIDOPSIS; EMBRYOPHYTA;

EID: 0036954020     PISSN: 09607412     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-313X.2002.01488.x     Document Type: Article

References (37)

1. Abel, S., Nguyen, M.D. and Theologis, A. (1995) The PS-IAA4/5-like family of early auxin-inducible mRNAs in Arabidopsis thaliana. J. Mol. Biol. 251, 533-549.
2. Abel, S. and Theologis, A. (1996) Early genes and auxin action. Plant Physiol. 111, 9-17.
3. Boerjan, W., Cervera, M.-T., Delarue, M., Beeckman, T., Dewitte, W., Bellini, C., Caboche, M., Onckelen, H.V., Montagu, M.V. and Inze, D. (1995) Superroot, a recessive mutation in Arabidopsis, confers auxin overproduction. Plant Cell, 7, 1405-1419.
4. Delarue, M., Prinsen, E., Onckelen, H.V., Caboche, M. and Bellini, C. (1998) Sur2 mutations of Arabidopsis thaliana define a new locus involved in the control of auxin homeostasis. Plant J. 14, 603-611.
5. Fukaki, H., Tameda, S., Masuda, H. and Tasaka, M. (2002) Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT gene of Arabidopsis. Plant J. 29, 153-168.
6. Goda, H., Shimada, Y., Asami, T., Fujioka, S. and Yoshida. (2002) Microarray analysis of Brassinosteroid-regulated genes in Arabidopsis. Plant Physiol. (In press).
7. Gray, W.M. and Estelle, M. (2000) Function of the ubiquitin-proteasome pathway in auxin response. TIBS, 25, 133-138.
8. Gray, W.M., Kepinski, S., Rouse, D., Leyzet, O. and Estelle, M. (2002) Auxin regulares SCF TIR1-dependent degradation of AUX/IAA proteins. Nature, 414, 271-276.
9. Hagen, G., Kleinschmidt, A. and Guilfoyle, T. (1984) Auxin-regulated gene expression in intact soybean hypocotyl and excised hypocotyl sections. Planta, 162, 137-153.
10. Koshiba, T., Ballas, N., Wong, L.-M. and Theologis, A. (1995) Transcriptional regulation of PS-IAA4/5 and PS-IAA6 early gene expression by indole acetic acid and protein synthesis inhibitors in pea (Pisum sativum). J. Mol. Biol. 253, 396-413.
11. Laskowski, M.J., Williams, M.E., Nusbaum, C. and Sussex, I.M. (1995) Formation of lateral root meristems is a two-stage process. Development, 121, 3303-3310.
12. Leyser, H.M.O., Picktt, F.B., Dharmasiri, S. and Estelle, M. (1996) Mutations in the AXR3 gene of Arabidopsis result in altered auxin response including ectopic expression from the SAURAC1 promoter. Plant J. 10, 403-413.
13. Lockhart, D.J., Dong, H., Byrne M.C. et al. (1996) Expression monitoring by hybridization to high-density oligonucleotide arrays. Nature Biotechnol. 14, 1675-1680.
14. McClure, B.A. and Guilfoyle, T. (1987) Characterization of a class of small auxin-inducible soybean polyadenylated RNAs. Plant Mol. Biol. 9, 611-623.
15. Nagpal, P., Walker, L.M., Young, J.C., Sonawala, A., Timpte, C., Estelle, M. and Reed, J.W. (2000) AXR2 encodes a member of the AUX/IAA protein family. Plant Physiol. 123, 563-573.
16. Ohgishi, M., Oka, A., Morelli, G., Ruberti, I. and Aoyama, T. (2001) Negative autoregulation of the Arabidopsis homeobox gene ATHB-2. Plant J. 25, 389-398.
17. Oyama, T., Shimura, Y. and Okada, K. (1997) The Arabidopsis HY5 gene encodes a bZip protein that regulates stimulus-induced development of root and hypocotyl. Genes Dev. 11, 2983-2995.
18. Payne, C.T., Zhang, F. and Lloyd, A.M. (2000) GL3 encodes a bHLH protein that regulates trichome development. Genetics, 156, 1349-1362.
19. Picard, D., Salser, S.J. and Yamamoto, K.R. (1988) A movable and regulable inactivation function within the steroid binding domain of the glucocorticoid receptor. Cell, 54, 1073-1080.
20. Reed, R.C. and Munday, G.K. (1996) Arabidopsis lateral root development requires auxin from the shoot. Plant Physiol. 111 (Suppl.), 134.
21. Rogg, L.E., Lasserll, J. and Barrel, B. (2001) A gain-of-function mutation in IAA28 suppresses lateral root development. Plant Cell, 13, 465-480.
22. Romano, C.P., Robson, P.R.H., Smith, H., Estelle, M. and Klee, H. (1995) Transgene-mediated auxin overproduction in Arabidopsis: hypocotyl elongation phenotype and interactions with the hy6-1 hypocotyl elongation and axr1 auxin-resistant mutants. Plant Mol. Biol. 27, 1071-1083.
23. Rouse, D., Mackey, P., Strinberg, P., Estelle, M. and Leyser, O. (1998) Changes in auxin response from mutations in an AUX/IAA gene. Science, 279, 1371-1373.
24. Sambrook, J., Fritsch, E.F. and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual, 2nd edn. New York: Cold Spring Harbor Laboratory Press.
25. Sawa, S., Ito, T., Shimura, Y. and Okada, K. (1999) FILAMENTOUS FLOWER controls the formation and development of Arabidopsis inflorescence and floral meristems. Plant Cell, 11, 69-86.
26. Serfling, E. (1989) Autoregulation - a common property of eukaryotic transcription factors? Trends Genet. 5, 131-133.
27. Sessa, G., Morelli, G. and Ruberti, I. (1993) The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12, 3507-3517.
28. Sitbon, F. and Rechenmann, C.P. (1997) Expression of auxin-regulated genes. Physiol. Plant. 100, 443-455.
29. Steindler, C., Matteucci, A., Sessa, G., Weimar, T., Ohgishi, M., Aoyama, T., Morelli, G. and Ruberuti, I. (1999) Shade avoidance responses are mediated by the ATHB-2 HD-Zip protein, a negative regulator of gene expression. Development, 126, 4235-4245.
30. Takahashi, Y., Ishida, S. and Nagata, T. (1995) Auxin-regulated genes. Plant Cell Physiol. 36, 390.
31. Theologis, A., Huynh, T.V. and Davis, R.W. (1985) Rapid induction of specific mRNA by auxin in pea epicotyl tissue. J. Mol. Biol. 183, 53-68.
32. Tian, Q. and Reed, J.W. (1999) Control of auxin-regulated root development by the Arabidopsis thaliana SHY2/IAA3 gene. Development, 126, 711-721.
33. Tian, Q., Uhlir, N.J. and Reed, J.W. (2002) Arabidopsis SHY2/IAA3 inhibits auxin-regulated gene expression. Plant Cell, 14, 301-319.
34. Triezenberg, S.J., Kingsbury, R.C. and McKnight, S.L. (1988) Functional dissection of VP16, the transactivator of herpes simplex virus immediate early gene expression. Gene Dev. 2, 718-729.
35. Wada, T., Tachibana, T., Shimura, Y. and Okada, K. (1997) Epidermal cell differentiation in Arabidopsis determined by a Myb homolog, CPC. Science, 277, 1113-1116.
36. Walker, J.C. and Key, J.L. (1982) Isolation of cloned cDNAs to auxin-responsive poly (A)+ RNAs of elongating soybean hypocotyl, Proc. Natl Acad. Sci. USA, 79, 7185-7189.
37. Zhao, Y., Christensen, S.K., Frankhauser, C., Cashman, J.R., Choen, J.D., Weigel, D. and Chory, J. (2001) A role for flavin monooxygenase-like enzymes in auxin biosynthesis. Science, 291, 306-309.