-
1
-
-
79951940120
-
Purine 5',8-cyclonucleoside lesions: chemistry and biology
-
Chatgilialoglu C., Ferreri C., Terzidis M.A. Purine 5',8-cyclonucleoside lesions: chemistry and biology. Chem. Soc. Rev. 2011, 40:1368-1382.
-
(2011)
Chem. Soc. Rev.
, vol.40
, pp. 1368-1382
-
-
Chatgilialoglu, C.1
Ferreri, C.2
Terzidis, M.A.3
-
2
-
-
48149099902
-
8,5'-Cyclopurine-2'-deoxynucleosides in DNA: mechanisms of formation, measurement, repair and biological effects
-
Jaruga P., Dizdaroglu M. 8,5'-Cyclopurine-2'-deoxynucleosides in DNA: mechanisms of formation, measurement, repair and biological effects. DNA Repair (Amst.) 2008, 7:1413-1425.
-
(2008)
DNA Repair (Amst.)
, vol.7
, pp. 1413-1425
-
-
Jaruga, P.1
Dizdaroglu, M.2
-
3
-
-
67650497063
-
Measurement of (5'R)- and (5'S)-8,5'-cyclo-2'-deoxyadenosines in DNA in vivo by liquid chromatography/isotope-dilution tandem mass spectrometry
-
Jaruga P., Xiao Y., Nelson B.C., Dizdaroglu M. Measurement of (5'R)- and (5'S)-8,5'-cyclo-2'-deoxyadenosines in DNA in vivo by liquid chromatography/isotope-dilution tandem mass spectrometry. Biochem. Biophys. Res. Commun. 2009, 386:656-660.
-
(2009)
Biochem. Biophys. Res. Commun.
, vol.386
, pp. 656-660
-
-
Jaruga, P.1
Xiao, Y.2
Nelson, B.C.3
Dizdaroglu, M.4
-
4
-
-
0035313578
-
Identification and quantification of 8,5'-cyclo-2'-deoxy-adenosine in DNA by liquid chromatography/mass spectrometry
-
Dizdaroglu M., Jaruga P., Rodriguez H. Identification and quantification of 8,5'-cyclo-2'-deoxy-adenosine in DNA by liquid chromatography/mass spectrometry. Free Radic. Biol. Med. 2001, 30:774-784.
-
(2001)
Free Radic. Biol. Med.
, vol.30
, pp. 774-784
-
-
Dizdaroglu, M.1
Jaruga, P.2
Rodriguez, H.3
-
5
-
-
0034636004
-
Removal of oxygen free-radical-induced 5',8-purine cyclodeoxynucleosides from DNA by the nucleotide excision-repair pathway in human cells
-
Kuraoka I., Bender C., Romieu A., Cadet J., Wood R.D., Lindahl T. Removal of oxygen free-radical-induced 5',8-purine cyclodeoxynucleosides from DNA by the nucleotide excision-repair pathway in human cells. Proc. Natl. Acad. Sci. U.S.A. 2000, 97:3832-3837.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 3832-3837
-
-
Kuraoka, I.1
Bender, C.2
Romieu, A.3
Cadet, J.4
Wood, R.D.5
Lindahl, T.6
-
6
-
-
0034698033
-
The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells
-
Brooks P.J., Wise D.S., Berry D.A., Kosmoski J.V., Smerdon M.J., Somers R.L., Mackie H., Spoonde A.Y., Ackerman E.J., Coleman K., Tarone R.E., Robbins J.H. The oxidative DNA lesion 8,5'-(S)-cyclo-2'-deoxyadenosine is repaired by the nucleotide excision repair pathway and blocks gene expression in mammalian cells. J. Biol. Chem. 2000, 275:22355-22362.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 22355-22362
-
-
Brooks, P.J.1
Wise, D.S.2
Berry, D.A.3
Kosmoski, J.V.4
Smerdon, M.J.5
Somers, R.L.6
Mackie, H.7
Spoonde, A.Y.8
Ackerman, E.J.9
Coleman, K.10
Tarone, R.E.11
Robbins, J.H.12
-
7
-
-
44949263779
-
The 8,5'-cyclopurine-2'-deoxynucleosides: candidate neurodegenerative DNA lesions in xeroderma pigmentosum, and unique probes of transcription and nucleotide excision repair
-
Brooks P.J. The 8,5'-cyclopurine-2'-deoxynucleosides: candidate neurodegenerative DNA lesions in xeroderma pigmentosum, and unique probes of transcription and nucleotide excision repair. DNA Repair (Amst.) 2008, 7:1168-1179.
-
(2008)
DNA Repair (Amst.)
, vol.7
, pp. 1168-1179
-
-
Brooks, P.J.1
-
8
-
-
58149144732
-
Accumulation of (5'S)-8,5'-cyclo-2'-deoxyadenosine in organs of Cockayne syndrome complementation group B gene knockout mice
-
Kirkali G., de Souza-Pinto N.C., Jaruga P., Bohr V.A., Dizdaroglu M. Accumulation of (5'S)-8,5'-cyclo-2'-deoxyadenosine in organs of Cockayne syndrome complementation group B gene knockout mice. DNA Repair (Amst.) 2009, 8:274-278.
-
(2009)
DNA Repair (Amst.)
, vol.8
, pp. 274-278
-
-
Kirkali, G.1
de Souza-Pinto, N.C.2
Jaruga, P.3
Bohr, V.A.4
Dizdaroglu, M.5
-
9
-
-
76749136353
-
Evidence for the involvement of DNA repair enzyme NEIL1 in nucleotide excision repair of (5'R)- and (5'S)-8,5'-cyclo-2'-deoxyadenosines
-
Jaruga P., Xiao Y., Vartanian V., Lloyd R.S., Dizdaroglu M. Evidence for the involvement of DNA repair enzyme NEIL1 in nucleotide excision repair of (5'R)- and (5'S)-8,5'-cyclo-2'-deoxyadenosines. Biochemistry 2010, 49:1053-1055.
-
(2010)
Biochemistry
, vol.49
, pp. 1053-1055
-
-
Jaruga, P.1
Xiao, Y.2
Vartanian, V.3
Lloyd, R.S.4
Dizdaroglu, M.5
-
10
-
-
0036837134
-
A single 8,5'-cyclo-2'-deoxyadenosine lesion in a TATA box prevents binding of the TATA binding protein and strongly reduces transcription in vivo
-
Marietta C., Gulam H., Brooks P.J. A single 8,5'-cyclo-2'-deoxyadenosine lesion in a TATA box prevents binding of the TATA binding protein and strongly reduces transcription in vivo. DNA Repair (Amst.) 2002, 1:967-975.
-
(2002)
DNA Repair (Amst.)
, vol.1
, pp. 967-975
-
-
Marietta, C.1
Gulam, H.2
Brooks, P.J.3
-
11
-
-
79955832048
-
(5'S)-8,5'-cyclo-2'-deoxyguanosine is a strong block to replication, a potent pol V-dependent mutagenic lesion, and is inefficiently repaired in Escherichia coli
-
Jasti V.P., Das R.S., Hilton B.A., Weerasooriya S., Zou Y., Basu A.K. (5'S)-8,5'-cyclo-2'-deoxyguanosine is a strong block to replication, a potent pol V-dependent mutagenic lesion, and is inefficiently repaired in Escherichia coli. Biochemistry 2011, 50:3862-3865.
-
(2011)
Biochemistry
, vol.50
, pp. 3862-3865
-
-
Jasti, V.P.1
Das, R.S.2
Hilton, B.A.3
Weerasooriya, S.4
Zou, Y.5
Basu, A.K.6
-
12
-
-
79959352056
-
High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing
-
Yuan B., Wang J., Cao H., Sun R., Wang Y. High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing. Nucleic Acids Res. 2011, 39:5945-5954.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 5945-5954
-
-
Yuan, B.1
Wang, J.2
Cao, H.3
Sun, R.4
Wang, Y.5
-
13
-
-
83755168927
-
Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA
-
Huang H., Das R.S., Basu A.K., Stone M.P. Structure of (5'S)-8,5'-cyclo-2'-deoxyguanosine in DNA. J. Am. Chem. Soc. 2011, 133:20357-20368.
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 20357-20368
-
-
Huang, H.1
Das, R.S.2
Basu, A.K.3
Stone, M.P.4
-
14
-
-
84859754661
-
Structures of (5'S)-8,5'-cyclo-2'-deoxyguanosine mismatched with dA or dT
-
Huang H., Das R.S., Basu A.K., Stone M.P. Structures of (5'S)-8,5'-cyclo-2'-deoxyguanosine mismatched with dA or dT. Chem. Res. Toxicol. 2012, 25:478-490.
-
(2012)
Chem. Res. Toxicol.
, vol.25
, pp. 478-490
-
-
Huang, H.1
Das, R.S.2
Basu, A.K.3
Stone, M.P.4
-
15
-
-
0032782017
-
Synthesis and characterization of oligonucleotides containing 5',8-cyclopurine 2'-deoxyribonucleosides: (5'R)-5',8-cyclo-2'-deoxyadenosine, (5'S)-5',8-cyclo-2'-deoxyguanosine, and (5'R)-5',8-cyclo-2thomampersan
-
Romieu A., Gasparutto D., Cadet J. Synthesis and characterization of oligonucleotides containing 5',8-cyclopurine 2'-deoxyribonucleosides: (5'R)-5',8-cyclo-2'-deoxyadenosine, (5'S)-5',8-cyclo-2'-deoxyguanosine, and (5'R)-5',8-cyclo-2'-deoxyguanosine. Chem. Res. Toxicol. 1999, 12:412-421.
-
(1999)
Chem. Res. Toxicol.
, vol.12
, pp. 412-421
-
-
Romieu, A.1
Gasparutto, D.2
Cadet, J.3
-
16
-
-
60849122212
-
The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions
-
Kropachev K., Kolbanovskii M., Cai Y., Rodriguez F., Kolbanovskii A., Liu Y., Zhang L., Amin S., Patel D., Broyde S., Geacintov N.E. The sequence dependence of human nucleotide excision repair efficiencies of benzo[a]pyrene-derived DNA lesions: insights into the structural factors that favor dual incisions. J. Mol. Biol. 2009, 386:1193-1203.
-
(2009)
J. Mol. Biol.
, vol.386
, pp. 1193-1203
-
-
Kropachev, K.1
Kolbanovskii, M.2
Cai, Y.3
Rodriguez, F.4
Kolbanovskii, A.5
Liu, Y.6
Zhang, L.7
Amin, S.8
Patel, D.9
Broyde, S.10
Geacintov, N.E.11
-
17
-
-
38049092084
-
Small-scale extracts for the study of nucleotide excision repair and non-homologous end joining
-
Smeaton M.B., Miller P.S., Ketner G., Hanakahi L.A. Small-scale extracts for the study of nucleotide excision repair and non-homologous end joining. Nucleic Acids Res. 2007, 35:e152.
-
(2007)
Nucleic Acids Res.
, vol.35
-
-
Smeaton, M.B.1
Miller, P.S.2
Ketner, G.3
Hanakahi, L.A.4
-
18
-
-
34250900982
-
Base-excision repair of oxidative DNA damage
-
David S.S., O'Shea V.L., Kundu S. Base-excision repair of oxidative DNA damage. Nature 2007, 447:941-950.
-
(2007)
Nature
, vol.447
, pp. 941-950
-
-
David, S.S.1
O'Shea, V.L.2
Kundu, S.3
-
19
-
-
75149158767
-
Non-specific DNA binding interferes with the efficient excision of oxidative lesions from chromatin by the human DNA glycosylase, NEIL1
-
Odell I.D., Newick K., Heintz N.H., Wallace S.S., Pederson D.S. Non-specific DNA binding interferes with the efficient excision of oxidative lesions from chromatin by the human DNA glycosylase, NEIL1. DNA Repair (Amst.) 2010, 9:134-143.
-
(2010)
DNA Repair (Amst.)
, vol.9
, pp. 134-143
-
-
Odell, I.D.1
Newick, K.2
Heintz, N.H.3
Wallace, S.S.4
Pederson, D.S.5
-
20
-
-
79960372834
-
Probing for DNA damage with beta-hairpins: similarities in incision efficiencies of bulky DNA adducts by prokaryotic and human nucleotide excision repair systems in vitro
-
Liu Y., Reeves D., Kropachev K., Cai Y., Ding S., Kolbanovskiy M., Kolbanovskiy A., Bolton J.L., Broyde S., Van Houten B., Geacintov N.E. Probing for DNA damage with beta-hairpins: similarities in incision efficiencies of bulky DNA adducts by prokaryotic and human nucleotide excision repair systems in vitro. DNA Repair (Amst.) 2011, 10:684-696.
-
(2011)
DNA Repair (Amst.)
, vol.10
, pp. 684-696
-
-
Liu, Y.1
Reeves, D.2
Kropachev, K.3
Cai, Y.4
Ding, S.5
Kolbanovskiy, M.6
Kolbanovskiy, A.7
Bolton, J.L.8
Broyde, S.9
Van Houten, B.10
Geacintov, N.E.11
-
21
-
-
75749154031
-
Dynamic two-stage mechanism of versatile DNA damage recognition by xeroderma pigmentosum group C protein
-
Clement F.C., Camenisch U., Fei J., Kaczmarek N., Mathieu N., Naegeli H. Dynamic two-stage mechanism of versatile DNA damage recognition by xeroderma pigmentosum group C protein. Mutat. Res. 2010, 685:21-28.
-
(2010)
Mutat. Res.
, vol.685
, pp. 21-28
-
-
Clement, F.C.1
Camenisch, U.2
Fei, J.3
Kaczmarek, N.4
Mathieu, N.5
Naegeli, H.6
-
22
-
-
23944515285
-
DNA quality control by conformational readout on the undamaged strand of the double helix
-
Buterin T., Meyer C., Giese B., Naegeli H. DNA quality control by conformational readout on the undamaged strand of the double helix. Chem. Biol. 2005, 12:913-922.
-
(2005)
Chem. Biol.
, vol.12
, pp. 913-922
-
-
Buterin, T.1
Meyer, C.2
Giese, B.3
Naegeli, H.4
-
23
-
-
79960380158
-
Resistance of bulky DNA lesions to nucleotide excision repair can result from extensive aromatic lesion-base stacking interactions
-
Reeves D.A., Mu H., Kropachev K., Cai Y., Ding S., Kolbanovskiy A., Kolbanovskiy M., Chen Y., Krzeminski J., Amin S., Patel D.J., Broyde S., Geacintov N.E. Resistance of bulky DNA lesions to nucleotide excision repair can result from extensive aromatic lesion-base stacking interactions. Nucleic Acids Res. 2011, 39:8752-8764.
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 8752-8764
-
-
Reeves, D.A.1
Mu, H.2
Kropachev, K.3
Cai, Y.4
Ding, S.5
Kolbanovskiy, A.6
Kolbanovskiy, M.7
Chen, Y.8
Krzeminski, J.9
Amin, S.10
Patel, D.J.11
Broyde, S.12
Geacintov, N.E.13
-
24
-
-
0030657472
-
Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes
-
Hess M.T., Gunz D., Luneva N., Geacintov N.E., Naegeli H. Base pair conformation-dependent excision of benzo[a]pyrene diol epoxide-guanine adducts by human nucleotide excision repair enzymes. Mol. Cell. Biol. 1997, 17:7069-7076.
-
(1997)
Mol. Cell. Biol.
, vol.17
, pp. 7069-7076
-
-
Hess, M.T.1
Gunz, D.2
Luneva, N.3
Geacintov, N.E.4
Naegeli, H.5
|