Oxidized quinones signal onset of darkness directly to the cyanobacterial circadian oscillator

Proceedings of the National Academy of Sciences of the United States of America

Volumn 109, Issue 44, 2012, Pages 17765-17769

  Kim, Yong Ick ^a   Vinyard, David J ^b,c,d   Ananyev, Gennady M ^b,c   Dismukes, G Charles ^b,c   Golden, Susan S ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b RUTGERS UNIVERSITY   (United States)

^c RUTGERS UNIVERSITY   (United States)

^d PRINCETON UNIVERSITY   (United States)

Author keywords

Chronobiology; Entrainment; Input pathway; Jetlag; Pseudoreceiver

Indexed keywords

ADENOSINE DIPHOSPHATE; ADENOSINE TRIPHOSPHATE; BACTERIAL PROTEIN; KAIA PROTEIN; KAIC PROTEIN; QUINONE DERIVATIVE; UNCLASSIFIED DRUG;

ARTICLE; CIRCADIAN RHYTHM; CYANOBACTERIUM; IN VITRO STUDY; IN VIVO STUDY; NONHUMAN; PHOTORECEPTOR; PHOTOSYNTHESIS; PRIORITY JOURNAL; PROTEIN PHOSPHORYLATION; SIGNAL TRANSDUCTION;

BACTERIAL PROTEINS; CIRCADIAN CLOCKS; CIRCADIAN RHYTHM SIGNALING PEPTIDES AND PROTEINS; CYANOBACTERIA; DARKNESS; MODELS, MOLECULAR; OXIDATION-REDUCTION; PHOSPHORYLATION; QUINONES; SIGNAL TRANSDUCTION;

CYANOBACTERIA; KAIA;

EID: 84868094430     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1216401109     Document Type: Article

References (27)

1. Ouyang Y, Andersson CR, Kondo T, Golden SS, Johnson CH (1998) Resonating circadian clocks enhance fitness in cyanobacteria. Proc Natl Acad Sci USA 95(15): 8660-8664.
2. Dunlap JC, Loros JJ, DeCoursey PJ, eds (2003) Chronobiology: Biological Timekeeping (Sinauer, Sunderland, MA)
3. Devlin PF, Batschauer A (2003) Photoreceptors Resetting the Circadian Clock. Photoreceptors and Light Signalling (Royal Society of Chemistry, Cambridge, UK), Vol 3, pp 343-368.
4. NakajimaM, et al. (2005) Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro. Science 308(5720):414-415.
5. Schmitz O, Katayama M, Williams SB, Kondo T, Golden SS (2000) CikA, a bacteriophytochrome that resets the cyanobacterial circadian clock. Science 289(5480): 765-768.
6. Mutsuda M, Michel KP, Zhang X, Montgomery BL, Golden SS (2003) Biochemical properties of CikA, an unusual phytochrome-like histidine protein kinase that resets the circadian clock in Synechococcus elongatus PCC 7942. J Biol Chem 278(21): 19102-19110.
7. Mackey SR, Ditty JL, Zeidner G, Chen Y, Golden SS (2009) Mechanisms for Synchronizing the Cyanobacterial Circadian Clock System with the Environment (Springer, Berlin), pp 141-156
8. Iwasaki H, Nishiwaki T, Kitayama Y, Nakajima M, Kondo T (2002) KaiA-stimulated KaiC phosphorylation in circadian timing loops in cyanobacteria. Proc Natl Acad Sci USA 99(24):15788-15793.
9. Williams SB, Vakonakis I, Golden SS, LiWang AC (2002) Structure and function from the circadian clock protein KaiA of Synechococcus elongatus: A potential clock input mechanism. Proc Natl Acad Sci USA 99(24):15357-15362.
10. Kitayama Y, Iwasaki H, Nishiwaki T, Kondo T (2003) KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. EMBO J 22(9): 2127-2134.
11. Kim YI, Dong G, Carruthers CW, Jr., Golden SS, LiWang A (2008) The day/night switch in KaiC, a central oscillator component of the circadian clock of cyanobacteria. Proc Natl Acad Sci USA 105(35):12825-12830.
12. Rust MJ, Golden SS, O'Shea EK (2011) Light-driven changes in energy metabolism directly entrain the cyanobacterial circadian oscillator. Science 331(6014):220-223.
13. Pattanayek R, et al. (2006) Analysis of KaiA-KaiC protein interactions in the cyanobacterial circadian clock using hybrid structural methods. EMBO J 25(9):2017-2028.
14. Ivleva NB, Gao T, LiWang AC, Golden SS (2006) Quinone sensing by the circadian input kinase of the cyanobacterial circadian clock. Proc Natl Acad Sci USA 103(46): 17468-17473.
15. Wood TL, et al. (2010) The KaiA protein of the cyanobacterial circadian oscillator is modulated by a redox-active cofactor. Proc Natl Acad Sci USA 107(13):5804-5809.
16. Gao T, Zhang X, Ivleva NB, Golden SS, LiWang A (2007) NMR structure of the pseudoreceiver domain of CikA. Protein Sci 16(3):465-475.
17. Johnson CH (1992) Phase Response Curves: What Can They Tell Us About Circadian Click? (Hokkaido Univ Press, Sapporo, Japan), pp 209-249
18. Kiyohara YB, Katayama M, Kondo T (2005) A novel mutation in kaiC affects resetting of the cyanobacterial circadian clock. J Bacteriol 187(8):2559-2564.
19. Kondo T, et al. (1993) Circadian rhythms in prokaryotes: Luciferase as a reporter of circadian gene expression in cyanobacteria. Proc Natl Acad Sci USA 90(12):5672-5676.
20. Yan J, Kurisu G, Cramer WA (2006) Intraprotein transfer of the quinone analogue inhibitor 2,5-dibromo-3-methyl-6-isopropyl-p-benzoquinone in the cytochrome b6f complex. Proc Natl Acad Sci USA 103(1):69-74.
21. Ananyev G, Dismukes GC (2005) How fast can photosystem II split water? Kinetic performance at high and low frequencies. Photosynth Res 84(1-3):355-365.
22. Groom Q, Kramer DM, Crofts AR, Ort DR (1993) The non-photochemical reduction of plastoquinone in leaves. Photosynth Res 36:205-215.
23. Krause G, Jahns P (2004) Chlorophyll a Fluorescence, eds Papageorgiou GC, Govindjee (Springer, Berlin)
24. Ivleva NB, Bramlett MR, Lindahl PA, Golden SS (2005) LdpA: A component of the circadian clock senses redox state of the cell. EMBO J 24(6):1202-1210.
25. Mackey SR, Ditty JL, Clerico EM, Golden SS (2007) Detection of rhythmic bioluminescence from luciferase reporters in cyanobacteria. Methods Mol Biol 362: 115-129.
26. Cooley JW, Vermaas WF (2001) Succinate dehydrogenase and other respiratory pathways in thylakoid membranes of Synechocystis sp. strain PCC 6803: Capacity comparisons and physiological function. J Bacteriol 183(14):4251-4258.
27. Pettersen EF, et al. (2004) UCSF Chimera-a visualization system for exploratory research and analysis. J Comput Chem 25(13):1605-1612.