-
2
-
-
0030995455
-
Phytoremediation of soil metals
-
Chaney RL, Malik M, Li YM, Brown SL, Brewer EP, Angle JS, Baker AJM (1997) Phytoremediation of soil metals. Curr Opin Biotechnol 8: 279-284.
-
(1997)
Curr Opin Biotechnol
, vol.8
, pp. 279-284
-
-
Chaney, R.L.1
Malik, M.2
Li, Y.M.3
Brown, S.L.4
Brewer, E.P.5
Angle, J.S.6
Baker, A.J.M.7
-
3
-
-
70350745311
-
Phytoremediation of contaminated soils and groundwater: lessons from the field
-
Vangronsveld J, Herzig R, Weyens N, Boulet J, Adriaensen K, Ruttens A, Thewys T, Vassilev A, Meers E, Nehnevajova E, van der Lelie D, Mench M (2009) Phytoremediation of contaminated soils and groundwater: lessons from the field. Environ Sci Pollut Res 16: 765-794.
-
(2009)
Environ Sci Pollut Res
, vol.16
, pp. 765-794
-
-
Vangronsveld, J.1
Herzig, R.2
Weyens, N.3
Boulet, J.4
Adriaensen, K.5
Ruttens, A.6
Thewys, T.7
Vassilev, A.8
Meers, E.9
Nehnevajova, E.10
van der Lelie, D.11
Mench, M.12
-
4
-
-
0034006897
-
Current approaches to the revegetation and reclamation of metalliferous mine wastes
-
Tordoff GM, Baker AJM, Willis AJ (2000) Current approaches to the revegetation and reclamation of metalliferous mine wastes. Chemosphere 41: 219-228.
-
(2000)
Chemosphere
, vol.41
, pp. 219-228
-
-
Tordoff, G.M.1
Baker, A.J.M.2
Willis, A.J.3
-
5
-
-
18644382708
-
A comparison of five rapid direct toxicity assessment methods to determine toxicity of pollutants to activated sludge
-
Dalzell DJB, Alte S, Aspichueta E, de la Sota A, Etxebarria J, Gutierrez M, Hoffmann CC, Sales D, Obst U, Christofi N (2002) A comparison of five rapid direct toxicity assessment methods to determine toxicity of pollutants to activated sludge. Chemosphere 47: 535-545.
-
(2002)
Chemosphere
, vol.47
, pp. 535-545
-
-
Dalzell, D.J.B.1
Alte, S.2
Aspichueta, E.3
de la Sota, A.4
Etxebarria, J.5
Gutierrez, M.6
Hoffmann, C.C.7
Sales, D.8
Obst, U.9
Christofi, N.10
-
6
-
-
13944269452
-
Toxicity of heavy metals in soil assessed with various soil microbial and plant growth assays: as comparative study
-
Broos K, Mertens J, Smolders E (2005) Toxicity of heavy metals in soil assessed with various soil microbial and plant growth assays: as comparative study. Environ Toxicol Chem 24: 634-640.
-
(2005)
Environ Toxicol Chem
, vol.24
, pp. 634-640
-
-
Broos, K.1
Mertens, J.2
Smolders, E.3
-
7
-
-
77956730459
-
The key role of soil microbes
-
P. Doelman and H. J. P. Eijsackers (Eds.), Amsterdam: Elsevier
-
Verstraete W, Mertens B (2004) The key role of soil microbes. In: Doelman P, Eijsackers HJP (eds) Vital soil: function, value, and properties, vol 29. Elsevier, Amsterdam, pp 127-157.
-
(2004)
Vital Soil: Function, Value, and Properties
, vol.29
, pp. 127-157
-
-
Verstraete, W.1
Mertens, B.2
-
8
-
-
0034775280
-
Ammonia-oxidizing bacteria: a model for molecular microbial ecology
-
Kowalchuk GA, Stephen JR (2001) Ammonia-oxidizing bacteria: a model for molecular microbial ecology. Annu Rev Microbiol 55: 485-529.
-
(2001)
Annu Rev Microbiol
, vol.55
, pp. 485-529
-
-
Kowalchuk, G.A.1
Stephen, J.R.2
-
9
-
-
33747479446
-
Archaea predominate among ammonia-oxidizing prokaryotes in soils
-
Leininger S, Urich T, Schloter M, Schwark L, Qi J, Nicol GW, Prosser JI, Schuster SC, Schleper C (2006) Archaea predominate among ammonia-oxidizing prokaryotes in soils. Nature 442: 806-809.
-
(2006)
Nature
, vol.442
, pp. 806-809
-
-
Leininger, S.1
Urich, T.2
Schloter, M.3
Schwark, L.4
Qi, J.5
Nicol, G.W.6
Prosser, J.I.7
Schuster, S.C.8
Schleper, C.9
-
10
-
-
0024822090
-
Autotrophic nitrification in bacteria
-
Prosser JI (1989) Autotrophic nitrification in bacteria. Adv Microb Physiol 30: 125-181.
-
(1989)
Adv Microb Physiol
, vol.30
, pp. 125-181
-
-
Prosser, J.I.1
-
11
-
-
0032953321
-
Effect of toxic metals on indigenous soil beta-subgroup proteobacterium ammonia oxidizer community structure and protection against toxicity by inoculated metal-resistant bacteria
-
Stephen JR, Chang Y-J, Macnaughton SJ, Kowalchuk GA, Leung KT, Flemming CA, White DC (1999) Effect of toxic metals on indigenous soil beta-subgroup proteobacterium ammonia oxidizer community structure and protection against toxicity by inoculated metal-resistant bacteria. Appl Environ Microbiol 65: 95-101.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 95-101
-
-
Stephen, J.R.1
Chang, Y.-J.2
Macnaughton, S.J.3
Kowalchuk, G.A.4
Leung, K.T.5
Flemming, C.A.6
White, D.C.7
-
12
-
-
2142808742
-
Impacts of heavy metal contamination and phytoremediation on a microbial community during a twelve-month microcosm experiment
-
Gremion F, Chatzinotas A, Kaufmann K, Von Sigler W, Harms H (2004) Impacts of heavy metal contamination and phytoremediation on a microbial community during a twelve-month microcosm experiment. FEMS Microbiol Ecol 48: 273-283.
-
(2004)
FEMS Microbiol Ecol
, vol.48
, pp. 273-283
-
-
Gremion, F.1
Chatzinotas, A.2
Kaufmann, K.3
von Sigler, W.4
Harms, H.5
-
13
-
-
33750919757
-
Long-term exposure to elevated zinc concentrations induced structural changes and zinc tolerance of the nitrifying community in soil
-
Mertens J, Springael D, De Troyer I, Cheyns K, Wattiau P, Smolders E (2006) Long-term exposure to elevated zinc concentrations induced structural changes and zinc tolerance of the nitrifying community in soil. Environ Microbiol 8: 2170-2178.
-
(2006)
Environ Microbiol
, vol.8
, pp. 2170-2178
-
-
Mertens, J.1
Springael, D.2
de Troyer, I.3
Cheyns, K.4
Wattiau, P.5
Smolders, E.6
-
15
-
-
33947380915
-
Adaptations to energy stress dictate the ecology and evolution of the Archaea
-
Valentine DL (2007) Adaptations to energy stress dictate the ecology and evolution of the Archaea. Nat Rev Microbiol 5: 316-323.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 316-323
-
-
Valentine, D.L.1
-
16
-
-
77949267703
-
Stimulated activity of the soil nitrifying community accelerates community adaptation to Zn stress
-
Ruyters S, Mertens J, Springael D, Smolders E (2010) Stimulated activity of the soil nitrifying community accelerates community adaptation to Zn stress. Soil Biol Biochem 42: 766-772.
-
(2010)
Soil Biol Biochem
, vol.42
, pp. 766-772
-
-
Ruyters, S.1
Mertens, J.2
Springael, D.3
Smolders, E.4
-
17
-
-
38349111486
-
Does long-term fertilization treatment affect the response of soil ammonia-oxidizing bacterial communities to Zn contamination?
-
Xia Y, Zhu Y-G, Gu Q, He J-Z (2007) Does long-term fertilization treatment affect the response of soil ammonia-oxidizing bacterial communities to Zn contamination? Plant Soil 301: 245-254.
-
(2007)
Plant Soil
, vol.301
, pp. 245-254
-
-
Xia, Y.1
Zhu, Y.-G.2
Gu, Q.3
He, J.-Z.4
-
18
-
-
68649110258
-
Bacteria, not archaea, restore nitrification in a zinc-contaminated soil
-
Mertens J, Broos K, Wakelin SA, Kowalchuk GA, Springael D, Smolders E (2009) Bacteria, not archaea, restore nitrification in a zinc-contaminated soil. ISME J 3: 916-923.
-
(2009)
ISME J
, vol.3
, pp. 916-923
-
-
Mertens, J.1
Broos, K.2
Wakelin, S.A.3
Kowalchuk, G.A.4
Springael, D.5
Smolders, E.6
-
19
-
-
77952254061
-
Extent of copper tolerance and consequences for functional stability of the ammonia-oxidizing community in long-term copper-contaminated soils
-
Mertens J, Wakelin SA, Broos K, McLaughlin MJ, Smolders E (2010) Extent of copper tolerance and consequences for functional stability of the ammonia-oxidizing community in long-term copper-contaminated soils. Environ Toxicol Chem 29: 27-37.
-
(2010)
Environ Toxicol Chem
, vol.29
, pp. 27-37
-
-
Mertens, J.1
Wakelin, S.A.2
Broos, K.3
McLaughlin, M.J.4
Smolders, E.5
-
20
-
-
43449086686
-
Resilience of the rhizosphere Pseudomonas and ammonia-oxidizing bacterial populations during phytoextraction of heavy metal polluted soil with poplar
-
Frey B, Pesaro M, Rüdt A, Widmer F (2008) Resilience of the rhizosphere Pseudomonas and ammonia-oxidizing bacterial populations during phytoextraction of heavy metal polluted soil with poplar. Environ Microbiol 10: 1433-1449.
-
(2008)
Environ Microbiol
, vol.10
, pp. 1433-1449
-
-
Frey, B.1
Pesaro, M.2
Rüdt, A.3
Widmer, F.4
-
21
-
-
70350596382
-
Do ammonia-oxidizing archaea respond to soil Cu contamination similarly as ammonia-oxidizing bacteria?
-
Li XF, Zhu YG, Cavagnaro TR, Chen MM, Sun JW, Chen XP, Qiao M (2009) Do ammonia-oxidizing archaea respond to soil Cu contamination similarly as ammonia-oxidizing bacteria? Plant Soil 324: 209-217.
-
(2009)
Plant Soil
, vol.324
, pp. 209-217
-
-
Li, X.F.1
Zhu, Y.G.2
Cavagnaro, T.R.3
Chen, M.M.4
Sun, J.W.5
Chen, X.P.6
Qiao, M.7
-
22
-
-
0029659521
-
Development of metal tolerance in soil bacterial communities exposed to experimentally increased metal levels
-
Diaz-Ravina M, Baath E (1996) Development of metal tolerance in soil bacterial communities exposed to experimentally increased metal levels. Appl Environ Microbiol 62: 2970-2977.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 2970-2977
-
-
Diaz-Ravina, M.1
Baath, E.2
-
23
-
-
0032171231
-
Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review
-
Giller KE, Witter E, McGrath SP (1998) Toxicity of heavy metals to microorganisms and microbial processes in agricultural soils: a review. Soil Biol Biochem 30: 1389-1414.
-
(1998)
Soil Biol Biochem
, vol.30
, pp. 1389-1414
-
-
Giller, K.E.1
Witter, E.2
McGrath, S.P.3
-
24
-
-
34547593764
-
REPK: an analytical web server to select restriction endonucleases for terminal restriction fragment length polymorphism analysis
-
Collins RE, Rocap G (2007) REPK: an analytical web server to select restriction endonucleases for terminal restriction fragment length polymorphism analysis. Nucleic Acids Res 35: W58-W62.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Collins, R.E.1
Rocap, G.2
-
25
-
-
33747348104
-
Identification of bacterial micropredators distinctively active in a soil microbial food web
-
Lueders T, Kindler R, Miltner A, Friedrich MW, Kaestner M (2006) Identification of bacterial micropredators distinctively active in a soil microbial food web. Appl Environ Microbiol 72: 5342-5348.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5342-5348
-
-
Lueders, T.1
Kindler, R.2
Miltner, A.3
Friedrich, M.W.4
Kaestner, M.5
-
26
-
-
67649610667
-
T-REX: software for the processing and analysis of T-RFLP data
-
Culman SW, Bukowski R, Gauch HG, Cadillo-Quiroz H, Buckley DH (2009) T-REX: software for the processing and analysis of T-RFLP data. BMC Bioinforma 10: 10.
-
(2009)
BMC Bioinforma
, vol.10
, pp. 10
-
-
Culman, S.W.1
Bukowski, R.2
Gauch, H.G.3
Cadillo-Quiroz, H.4
Buckley, D.H.5
-
28
-
-
0001669952
-
A stagewise rejective multiple test procedure based on a modified Bonferroni test
-
Hommel G (1988) A stagewise rejective multiple test procedure based on a modified Bonferroni test. Biometrika 75: 383-386.
-
(1988)
Biometrika
, vol.75
, pp. 383-386
-
-
Hommel, G.1
-
29
-
-
52949137846
-
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
-
Nicol GW, Leininger S, Schleper C, Prosser JI (2008) The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria. Environ Microbiol 10: 2966-2978.
-
(2008)
Environ Microbiol
, vol.10
, pp. 2966-2978
-
-
Nicol, G.W.1
Leininger, S.2
Schleper, C.3
Prosser, J.I.4
-
30
-
-
58549087182
-
Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils
-
Schauss K, Focks A, Leininger S, Kotzerke A, Heuer H, Thiele-Bruhn S, Sharma S, Wilke BM, Matthies M, Smalla K, Munch JC, Amelung W, Kaupenjohann M, Schloter M, Schleper C (2009) Dynamics and functional relevance of ammonia-oxidizing archaea in two agricultural soils. Environ Microbiol 11: 446-456.
-
(2009)
Environ Microbiol
, vol.11
, pp. 446-456
-
-
Schauss, K.1
Focks, A.2
Leininger, S.3
Kotzerke, A.4
Heuer, H.5
Thiele-Bruhn, S.6
Sharma, S.7
Wilke, B.M.8
Matthies, M.9
Smalla, K.10
Munch, J.C.11
Amelung, W.12
Kaupenjohann, M.13
Schloter, M.14
Schleper, C.15
-
31
-
-
78049337307
-
Assessment of in situ immobilization of lead (Pb) and arsenic (As) in contaminated soils with phosphate and iron: solubility and bioaccessibility
-
Cui Y, Du X, Weng L, van Riemsdijk WH (2010) Assessment of in situ immobilization of lead (Pb) and arsenic (As) in contaminated soils with phosphate and iron: solubility and bioaccessibility. Water Air Soil Pollut 213: 95-104.
-
(2010)
Water Air Soil Pollut
, vol.213
, pp. 95-104
-
-
Cui, Y.1
Du, X.2
Weng, L.3
van Riemsdijk, W.H.4
-
33
-
-
38049148476
-
Microbes and metals: interactions in the environment
-
Haferburg G, Kothe E (2007) Microbes and metals: interactions in the environment. J Basic Microbiol 47: 453-467.
-
(2007)
J Basic Microbiol
, vol.47
, pp. 453-467
-
-
Haferburg, G.1
Kothe, E.2
-
34
-
-
43449104759
-
Genome-wide transcriptional responses of Nitrosomonas europaea to zinc
-
Park S, Ely RL (2008) Genome-wide transcriptional responses of Nitrosomonas europaea to zinc. Arch Microbiol 189: 541-548.
-
(2008)
Arch Microbiol
, vol.189
, pp. 541-548
-
-
Park, S.1
Ely, R.L.2
-
35
-
-
79957684288
-
Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil
-
Tourna M, Stieglmeier M, Spang A, Konneke M, Schintlmeister A, Urich T, Engel M, Schloter M, Wagner M, Richter A, Schleper C (2011) Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil. Proc Natl Acad Sci U S A 108: 8420-8425.
-
(2011)
Proc Natl Acad Sci U S A
, vol.108
, pp. 8420-8425
-
-
Tourna, M.1
Stieglmeier, M.2
Spang, A.3
Konneke, M.4
Schintlmeister, A.5
Urich, T.6
Engel, M.7
Schloter, M.8
Wagner, M.9
Richter, A.10
Schleper, C.11
-
36
-
-
78049277482
-
Archaea rather than bacteria control nitrification in two agricultural acidic soils
-
Gubry-Rangin C, Nicol GW, Prosser JI (2010) Archaea rather than bacteria control nitrification in two agricultural acidic soils. FEMS Microbiol Ecol 74: 566-574.
-
(2010)
FEMS Microbiol Ecol
, vol.74
, pp. 566-574
-
-
Gubry-Rangin, C.1
Nicol, G.W.2
Prosser, J.I.3
-
37
-
-
0034973916
-
Nitrification in acid soils: micro-organisms and mechanisms
-
De Boer W, Kowalchuk GA (2001) Nitrification in acid soils: micro-organisms and mechanisms. Soil Biol Biochem 33: 853-866.
-
(2001)
Soil Biol Biochem
, vol.33
, pp. 853-866
-
-
de Boer, W.1
Kowalchuk, G.A.2
-
38
-
-
70449090074
-
Soil pH regulates the abundance and diversity of Group 1.1c Crenarchaeota
-
Lehtovirta LE, Prosser JI, Nicol GW (2009) Soil pH regulates the abundance and diversity of Group 1. 1c Crenarchaeota. FEMS Microbiol Ecol 70: 367-376.
-
(2009)
FEMS Microbiol Ecol
, vol.70
, pp. 367-376
-
-
Lehtovirta, L.E.1
Prosser, J.I.2
Nicol, G.W.3
-
39
-
-
33846678004
-
Low nitrification rates in acid scots pine forest soils are due to pH-related factors
-
Nugroho RA, Roling WFM, Laverman AM, Verhoef HA (2007) Low nitrification rates in acid scots pine forest soils are due to pH-related factors. Microb Ecol 53: 89-97.
-
(2007)
Microb Ecol
, vol.53
, pp. 89-97
-
-
Nugroho, R.A.1
Roling, W.F.M.2
Laverman, A.M.3
Verhoef, H.A.4
-
40
-
-
79960106693
-
Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils
-
Yao H, Gao Y, Nicol GW, Campbell CD, Prosser JI, Zhang L, Han W, Singh BK (2011) Links between ammonia oxidizer community structure, abundance, and nitrification potential in acidic soils. Appl Environ Microbiol 77: 4618-4625.
-
(2011)
Appl Environ Microbiol
, vol.77
, pp. 4618-4625
-
-
Yao, H.1
Gao, Y.2
Nicol, G.W.3
Campbell, C.D.4
Prosser, J.I.5
Zhang, L.6
Han, W.7
Singh, B.K.8
-
41
-
-
0002151048
-
The effect of root exudates on rhizosphere microbial populations
-
R. Pinton, Z. Varanini, and P. Nannipieri (Eds.), New York: Marcel Dekker
-
Brimecomb MJ, de Leij FA, Lynch JM (2001) The effect of root exudates on rhizosphere microbial populations. In: Pinton R, Varanini Z, Nannipieri P (eds) The rhizosphere: biochemistry and organic substances at the soil-plant interface. Marcel Dekker, New York, pp 95-140.
-
(2001)
The Rhizosphere: Biochemistry and Organic Substances at the Soil-Plant Interface
, pp. 95-140
-
-
Brimecomb, M.J.1
de Leij, F.A.2
Lynch, J.M.3
-
42
-
-
0034851136
-
Soil and plant specific effects on bacterial community composition in the rhizosphere
-
Marschner P, Yang CH, Lieberei R, Crowley DE (2001) Soil and plant specific effects on bacterial community composition in the rhizosphere. Soil Biol Biochem 33: 1437-1445.
-
(2001)
Soil Biol Biochem
, vol.33
, pp. 1437-1445
-
-
Marschner, P.1
Yang, C.H.2
Lieberei, R.3
Crowley, D.E.4
-
43
-
-
70350052417
-
Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria
-
Martens-Habbena W, Berube PM, Urakawa H, de la Torre JR, Stahl DA (2009) Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria. Nature 461: 976-U234.
-
(2009)
Nature
, vol.461
-
-
Martens-Habbena, W.1
Berube, P.M.2
Urakawa, H.3
de la Torre, J.R.4
Stahl, D.A.5
-
44
-
-
80052619769
-
Nitrogen turnover in soil and global change
-
Ollivier J, Töwe S, Bannert A, Hai B, Kastl E-M, Meyer A, Su MX, Kleineidam K, Schloter M (2011) Nitrogen turnover in soil and global change. FEMS Microbiol Ecol 78: 3-16.
-
(2011)
FEMS Microbiol Ecol
, vol.78
, pp. 3-16
-
-
Ollivier, J.1
Töwe, S.2
Bannert, A.3
Hai, B.4
Kastl, E.-M.5
Meyer, A.6
Su, M.X.7
Kleineidam, K.8
Schloter, M.9
-
45
-
-
0030814870
-
The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations
-
Rotthauwe JH, Witzel KP, Liesack W (1997) The ammonia monooxygenase structural gene amoA as a functional marker: molecular fine-scale analysis of natural ammonia-oxidizing populations. Appl Environ Microbiol 63: 4704-4712.
-
(1997)
Appl Environ Microbiol
, vol.63
, pp. 4704-4712
-
-
Rotthauwe, J.H.1
Witzel, K.P.2
Liesack, W.3
|