-
1
-
-
0025183708
-
Basic local alignment search tool
-
S.F. Altschul, W. Gish, W. Miller, E.W. Myers, and D.J. Lipman Basic local alignment search tool Journal of Molecular Biology 215 1990 403 410
-
(1990)
Journal of Molecular Biology
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
40549120596
-
The RAST Server: Rapid annotations using subsystems technology
-
R.K. Aziz, D. Bartels, A.A. Best, M. DeJongh, T. Disz, and R.A. Edwards The RAST Server: Rapid annotations using subsystems technology BMC Genomics 9 2008 75
-
(2008)
BMC Genomics
, vol.9
, pp. 75
-
-
Aziz, R.K.1
Bartels, D.2
Best, A.A.3
Dejongh, M.4
Disz, T.5
Edwards, R.A.6
-
3
-
-
77956996758
-
A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus
-
J. Barke, R.F. Seipke, S. Grüschow, D. Heavens, N. Drou, and M.J. Bibb A mixed community of actinomycetes produce multiple antibiotics for the fungus farming ant Acromyrmex octospinosus BMC Biology 8 2010 109
-
(2010)
BMC Biology
, vol.8
, pp. 109
-
-
Barke, J.1
Seipke, R.F.2
Grüschow, S.3
Heavens, D.4
Drou, N.5
Bibb, M.J.6
-
4
-
-
79961047167
-
A mutualistic microbiome: How do fungus-growing ants select their antibiotic-producing bacteria
-
J. Barke, R.F. Yu, D.W. Seipke, and M.I. Hutchings A mutualistic microbiome: How do fungus-growing ants select their antibiotic-producing bacteria Communicative & Integrative Biology 4 2011 41 43
-
(2011)
Communicative & Integrative Biology
, vol.4
, pp. 41-43
-
-
Barke, J.1
Yu, R.F.2
Seipke, D.W.3
Hutchings, M.I.4
-
5
-
-
0026645203
-
Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp
-
M. Bierman, R. Logan, K. O'Brien, E.T. Seno, R.N. Rao, and B.E. Schoner Plasmid cloning vectors for the conjugal transfer of DNA from Escherichia coli to Streptomyces spp Gene 116 1992 43 49
-
(1992)
Gene
, vol.116
, pp. 43-49
-
-
Bierman, M.1
Logan, R.2
O'Brien, K.3
Seno, E.T.4
Rao, R.N.5
Schoner, B.E.6
-
6
-
-
0034047123
-
Biosynthesis of the polyene antifungal antibiotic nystatin in Streptomyces noursei ATCC 11455: Analysis of the gene cluster and deduction of the biosynthetic pathway
-
DOI 10.1016/S1074-5521(00)00120-4
-
T. Brautaset, O.N. Sekurova, H. Sletta, T.E. Ellingsen, A.R. StLm, and S. Valla Biosynthesis of the polyene antifungal antibiotic nystatin in Streptomyces noursei ATCC 11455: Analysis of the gene cluster and deduction of the biosynthetic pathway Chemistry & Biology 7 2000 395 403 (Pubitemid 30400042)
-
(2000)
Chemistry and Biology
, vol.7
, Issue.6
, pp. 395-403
-
-
Brautaset, T.1
Sekurova, O.N.2
Sletta, H.3
Ellingsen, T.E.4
Strom, A.R.5
Valla, S.6
Zotchev, S.B.7
-
8
-
-
48449098635
-
Mining microbial genomes for new natural products and biosynthetic pathways
-
G.L. Challis Mining microbial genomes for new natural products and biosynthetic pathways Microbiology 154 2008 1555 1569
-
(2008)
Microbiology
, vol.154
, pp. 1555-1569
-
-
Challis, G.L.1
-
9
-
-
0345492332
-
Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species
-
G.L. Challis, and D.A. Hopwood Synergy and contingency as driving forces for the evolution of multiple secondary metabolite production by Streptomyces species Proceedings of the National Academy of Sciences of the United States of America 100 2003 14555 14561 (Pubitemid 37499281)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.24
, pp. 14555-14561
-
-
Challis, G.L.1
Hopwood, D.A.2
-
10
-
-
0345531148
-
Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex
-
DOI 10.1016/j.chembiol.2003.10.007
-
S. Chen, X. Huang, X. Zhou, L. Bai, J. He, and K.J. Jeong Organizational and mutational analysis of a complete FR-008/candicidin gene cluster encoding a structurally related polyene complex Chemistry & Biology 10 2003 1065 1076 (Pubitemid 37496437)
-
(2003)
Chemistry and Biology
, vol.10
, Issue.11
, pp. 1065-1076
-
-
Chen, S.1
Huang, X.2
Zhou, X.3
Bai, L.4
He, J.5
Jeong, K.J.6
Lee, S.Y.7
Deng, Z.8
-
11
-
-
0034931058
-
Prevalence and impact of a virulent parasite on a tripartite mutualism
-
C.R. Currie Prevalence and impact of a virulent parasite on a tripartite mutualism Oecologia 128 2001 96 106
-
(2001)
Oecologia
, vol.128
, pp. 96-106
-
-
Currie, C.R.1
-
12
-
-
0038522839
-
Experimental evidence of a tripartite mutualism: Bacteria protect ant fungus gardens from specialized parasites
-
DOI 10.1034/j.1600-0706.2003.12036.x
-
C.R. Currie, A.N.M. Bot, and J.J. Boomsma Experimental evidence of a tripartite mutualism: Bacteria protect ant fungus gardens from specialized parasites Oikos 101 2003 91 102 (Pubitemid 36614722)
-
(2003)
Oikos
, vol.101
, Issue.1
, pp. 91-102
-
-
Currie, C.R.1
Bot, A.N.M.2
Boomsma, J.J.3
-
14
-
-
30344438239
-
Coevolved crypts and exocrine glands support mutualistic bacteria in fungus-growing ants
-
DOI 10.1126/science.1119744
-
C.R. Currie, M. Poulsen, J. Mendenhall, J.J. Boomsma, and J. Billen Coevolved crypts and exocrine glands support mutualistic bacteria in fungus-growing ants Science 311 2006 81 83 (Pubitemid 43063062)
-
(2006)
Science
, vol.311
, Issue.5757
, pp. 81-83
-
-
Currie, C.R.1
Poulsen, M.2
Mendenhall, J.3
Boomsma, J.J.4
Billen, J.5
-
15
-
-
0038676409
-
Inhibition of histone deacetylase activity by butyrate
-
J.R. Davies Inhibition of histone deacetylase activity by butyrate The Journal of Nutrition 133 2003 2485S 2493S
-
(2003)
The Journal of Nutrition
, vol.133
-
-
Davies, J.R.1
-
16
-
-
77952547165
-
Therapy for fungal diseases: Opportunities and priorities
-
D.W. Denning, and W.W. Hope Therapy for fungal diseases: Opportunities and priorities Trends in Microbiology 18 2010 195 204
-
(2010)
Trends in Microbiology
, vol.18
, pp. 195-204
-
-
Denning, D.W.1
Hope, W.W.2
-
18
-
-
79951846247
-
Engineering Streptomyces coelicolor for heterologous expression of secondary metabolite gene clusters
-
J.P. Gomez-Escribano, and M.J. Bibb Engineering Streptomyces coelicolor for heterologous expression of secondary metabolite gene clusters Microbial Biotechnology 4 2011 207 215
-
(2011)
Microbial Biotechnology
, vol.4
, pp. 207-215
-
-
Gomez-Escribano, J.P.1
Bibb, M.J.2
-
19
-
-
0037452723
-
PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin
-
DOI 10.1073/pnas.0337542100
-
B. Gust, G.L. Challis, K. Fowler, T. Kieser, and K.F. Chater PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin Proceedings of the National Academy of Sciences of the United States of America 100 2003 1541 1546 (Pubitemid 36254483)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.4
, pp. 1541-1546
-
-
Gust, B.1
Challis, G.L.2
Fowler, K.3
Kieser, T.4
Chater, K.F.5
-
20
-
-
3042791271
-
λ Red-mediated genetic manipulation of antibiotic-producing Streptomyces
-
DOI 10.1016/S0065-2164(04)54004-2, PII S0065216404540042
-
B. Gust, G. Chandra, D. Jakimowicz, T. Yuqing, C.J. Bruton, and K.F. Chater Lambda Red-mediated genetic manipulation of antibiotic-producing Streptomyces Advances in Applied Microbiology 54 2004 107 128 (Pubitemid 38891904)
-
(2004)
Advances in Applied Microbiology
, vol.54
, pp. 107-128
-
-
Gust, B.1
Chandra, G.2
Jakimowicz, D.3
Yuqing, T.4
Bruton, C.J.5
Chater, K.F.6
-
22
-
-
0016632309
-
Powdered chitin agar as a selective medium for enumeration of actinomycetes in water and soil
-
S.C. Hsu, and J.L. Lockwood Powdered chitin agar as a selective medium for enumeration of actinomycetes in water and soil Applied and Environmental Microbiology 29 1975 422 426
-
(1975)
Applied and Environmental Microbiology
, vol.29
, pp. 422-426
-
-
Hsu, S.C.1
Lockwood, J.L.2
-
23
-
-
0031662188
-
Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity
-
P. Hugenholtz, B.M. Goebel, and N.R. Pace Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity Journal of Bacteriology 180 1998 4765 4774 (Pubitemid 28429361)
-
(1998)
Journal of Bacteriology
, vol.180
, Issue.18
, pp. 4765-4774
-
-
Hugenholtz, P.1
Goebel, B.M.2
Pace, N.R.3
-
24
-
-
66249125358
-
Candicidin biosynthesis gene cluster is widely distributed among Streptomyces spp. isolated from sediments and the neuston layer of the Trondheim Fjord, Norway
-
H. Jorgensen, E. Fjaervik, S. Havag, P. Bruheim, H. Bredholt, and G. Klinkenberg Candicidin biosynthesis gene cluster is widely distributed among Streptomyces spp. isolated from sediments and the neuston layer of the Trondheim Fjord, Norway Applied and Environmental Microbiology 75 2009 3296 3303
-
(2009)
Applied and Environmental Microbiology
, vol.75
, pp. 3296-3303
-
-
Jorgensen, H.1
Fjaervik, E.2
Havag, S.3
Bruheim, P.4
Bredholt, H.5
Klinkenberg, G.6
-
25
-
-
0031473543
-
Wild-type Escherichia coli grows on the chitin disaccharide, N, N'-diacetylchitobiose, by expressing the cel operon
-
N.O. Keyhani, and S. Roseman Wild-type Escherichia coli grows on the chitin disaccharide, N, N'-diacetylchitobiose, by expressing the cel operon Proceedings of the National Academy of Sciences of the United States of America 94 1997 14367 14371
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, pp. 14367-14371
-
-
Keyhani, N.O.1
Roseman, S.2
-
26
-
-
0003869903
-
-
The John Innes Foundation Norwich, UK
-
T. Kieser, M.J. Bibb, M.J. Buttner, K.F. Chater, and D.A. Hopwood Practical Streptomyces genetics 2000 The John Innes Foundation Norwich, UK
-
(2000)
Practical Streptomyces Genetics
-
-
Kieser, T.1
Bibb, M.J.2
Buttner, M.J.3
Chater, K.F.4
Hopwood, D.A.5
-
27
-
-
70350246089
-
Identification of functionally clustered nystatin-like biosynthetic genes in a rare actinomycetes, Pseudonocardia autotrophica
-
B.-G. Kim, M.-J. Lee, J. Seo, Y.-B. Hwang, M.-Y. Lee, and K. Han Identification of functionally clustered nystatin-like biosynthetic genes in a rare actinomycetes, Pseudonocardia autotrophica Journal of Industrial Microbiology & Biotechnology 36 2009 1425 1434
-
(2009)
Journal of Industrial Microbiology & Biotechnology
, vol.36
, pp. 1425-1434
-
-
Kim, B.-G.1
Lee, M.-J.2
Seo, J.3
Hwang, Y.-B.4
Lee, M.-Y.5
Han, K.6
-
28
-
-
34548412813
-
Non-specific association between filamentous bacteria and fungus-growing ants
-
DOI 10.1007/s00114-007-0262-y
-
C. Kost, T. Lakatos, I. Bottcher, W.-R. Arendholz, M. Redenbach, and R. Wirth Non specific association between filamentous bacteria and fungus-growing ants Die Naturwissenschaften 94 2007 821 828 (Pubitemid 47367669)
-
(2007)
Naturwissenschaften
, vol.94
, Issue.10
, pp. 821-828
-
-
Kost, C.1
Lakatos, T.2
Bottcher, I.3
Arendholz, W.-R.4
Redenbach, M.5
Wirth, R.6
-
29
-
-
2942538300
-
Versatile and open software for comparing large genomes
-
B. Kurtz, A. Phillipy, A.L. Delcher, M. Smoot, M. Shumway, and C. Antonescu Versatile and open software for comparing large genomes Genome Biology 5 2004 R12
-
(2004)
Genome Biology
, vol.5
, pp. 12
-
-
Kurtz, B.1
Phillipy, A.2
Delcher, A.L.3
Smoot, M.4
Shumway, M.5
Antonescu, C.6
-
30
-
-
0001857117
-
16S/23S S rRNA sequencing
-
E. Stackebrandt, M. Goodfellow, John Wiley and Sons New York
-
J. Lane 16S/23S S rRNA sequencing E. Stackebrandt, M. Goodfellow, Nucleic acid techniques in bacterial systematics 1991 John Wiley and Sons New York 115 175
-
(1991)
Nucleic Acid Techniques in Bacterial Systematics
, pp. 115-175
-
-
Lane, J.1
-
31
-
-
0026575735
-
Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integrative vector
-
D.J. MacNeil, K.M. Gewain, C.L. Ruby, G. Dezeny, P.H. Gibbons, and T. MacNeil Analysis of Streptomyces avermitilis genes required for avermectin biosynthesis utilizing a novel integrative vector Gene 111 1992 61 68
-
(1992)
Gene
, vol.111
, pp. 61-68
-
-
MacNeil, D.J.1
Gewain, K.M.2
Ruby, C.L.3
Dezeny, G.4
Gibbons, P.H.5
MacNeil, T.6
-
32
-
-
84861493960
-
Symbiotic bacteria on the cuticle of the leaf-cutting ant Acromyrmex subterraneus subterraneus protect workers from attack by entomopathogenic fungi
-
10.1098/rsbl.2011.0963
-
T.C. Mattoso, D.D.O. Moreira, and R.I. Samuels Symbiotic bacteria on the cuticle of the leaf-cutting ant Acromyrmex subterraneus subterraneus protect workers from attack by entomopathogenic fungi Biology Letters 8 2012 461 464 10.1098/rsbl.2011.0963
-
(2012)
Biology Letters
, vol.8
, pp. 461-464
-
-
Mattoso, T.C.1
Moreira, D.D.O.2
Samuels, R.I.3
-
33
-
-
21044448952
-
Daptomycin biosynthesis in Streptomyces roseosporus: Cloning and analysis of the gene cluster and revision of peptide stereochemistry
-
DOI 10.1099/mic.0.27757-0
-
V. Miao, M.-F. Coeffet-LeGal, P. Brian, R. Brost, J. Penn, and A. Whiting Daptomycin biosynthesis in Streptomyces roseosporus: Cloning and analysis of the gene cluster and revision of peptide stereochemistry Microbiology 151 2005 1507 1523 (Pubitemid 40711798)
-
(2005)
Microbiology
, vol.151
, Issue.5
, pp. 1507-1523
-
-
Miao, V.1
Coeffet-LeGal, M.-F.2
Brian, P.3
Brost, R.4
Penn, J.5
Whiting, A.6
Martin, S.7
Ford, R.8
Parr, I.9
Bouchard, M.10
Silva, C.J.11
Wrigley, S.K.12
Baltz, R.H.13
-
35
-
-
0035823272
-
Humans as the world's greatest evolutionary force
-
DOI 10.1126/science.293.5536.1786
-
S.R. Palumbi Human's as the world's greatest evolutionary force Science 293 2001 1786 1790 (Pubitemid 32845769)
-
(2001)
Science
, vol.293
, Issue.5536
, pp. 1786-1790
-
-
Palumbi, S.R.1
-
36
-
-
26944502019
-
Specificity prediction of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines (TSVMs)
-
DOI 10.1093/nar/gki885
-
C. Rausch, T. Weber, O. Kohlbacher, W. Wohlleben, and D.H. Huson Specificity predcition of adenylation domains in nonribosomal peptide synthetases (NRPS) using transductive support vector machines Nucleic Acids Research 33 2005 5799 5808 (Pubitemid 41742599)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.18
, pp. 5799-5808
-
-
Rausch, C.1
Weber, T.2
Kohlbacher, O.3
Wohlleben, W.4
Huson, D.H.5
-
37
-
-
0033635022
-
Artemis: Sequence visualization and annotation
-
K. Rutherford, J. Parkhill, J. Crook, T. Horsnell, P. Rice, and M.A. Rajandream Artemis: Sequence visualization and annotation Bioinformatics 16 2000 944 945
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
Rajandream, M.A.6
-
38
-
-
79952128810
-
Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants
-
I. Schoenian, M. Spiteller, M. Ghaste, R. Wirth, H. Herz, and D. Spiteller Chemical basis of the synergism and antagonism in microbial communities in the nests of leaf-cutting ants Proceedings of the National Academy of Sciences of the United States of America 108 2011 1955 1960
-
(2011)
Proceedings of the National Academy of Sciences of the United States of America
, vol.108
, pp. 1955-1960
-
-
Schoenian, I.1
Spiteller, M.2
Ghaste, M.3
Wirth, R.4
Herz, H.5
Spiteller, D.6
-
40
-
-
79961040245
-
A single Streptomyces symbiont makes multiple antifungals to support the fungus farming ant Acromyrmex octospinosus
-
R.F. Seipke, J. Barke, C. Brearley, L. Hill, D.W. Yu, and R.J.M. Goss A single Streptomyces symbiont makes multiple antifungals to support the fungus farming ant Acromyrmex octospinosus PLoS One 6 2011 e22028
-
(2011)
PLoS One
, vol.6
, pp. 22028
-
-
Seipke, R.F.1
Barke, J.2
Brearley, C.3
Hill, L.4
Yu, D.W.5
Goss, R.J.M.6
-
41
-
-
84858001180
-
Fungus-growing Allomerus ants are associated with antibiotic-producing actinobacteria
-
R.F. Seipke, J. Barke, M.X. Ruiz-Gonzalez, J. Orivel, D.W. Yu, and M.I. Hutchings Fungus-growing Allomerus ants are associated with antibiotic-producing actinobacteria Antonie Van Leeuwenhoek 101 2011 443 447
-
(2011)
Antonie Van Leeuwenhoek
, vol.101
, pp. 443-447
-
-
Seipke, R.F.1
Barke, J.2
Ruiz-Gonzalez, M.X.3
Orivel, J.4
Yu, D.W.5
Hutchings, M.I.6
-
42
-
-
79961096650
-
Draft genome sequence of Streptomyces S4, a symbiont of the leafcutter ant Acromyrmex octospinosus
-
R.F. Seipke, L. Crossman, D. Drou, D. Heavens, M.J. Bibb, and M. Caccamo Draft genome sequence of Streptomyces S4, a symbiont of the leafcutter ant Acromyrmex octospinosus Journal of Bacteriology 193 2011 4270 4271
-
(2011)
Journal of Bacteriology
, vol.193
, pp. 4270-4271
-
-
Seipke, R.F.1
Crossman, L.2
Drou, D.3
Heavens, D.4
Bibb, M.J.5
Caccamo, M.6
-
43
-
-
84862628033
-
Streptomyces as symbionts: An emerging and widespread theme?
-
10.1111/j.1574-6976.2011.00313.x
-
R.F. Seipke, M. Kaltenpoth, and M.I. Hutchings Streptomyces as symbionts: An emerging and widespread theme? FEMS Microbiology Reviews 36 2011 1 15 10.1111/j.1574-6976.2011.00313.x
-
(2011)
FEMS Microbiology Reviews
, vol.36
, pp. 1-15
-
-
Seipke, R.F.1
Kaltenpoth, M.2
Hutchings, M.I.3
-
44
-
-
70449555142
-
Generalized antifungal activity and 454-screening of Pseudonocardia and Amycolatopsis bacteria in nests of fungus-growing ants
-
R. Sen, H.D. Ishak, E. Estrada, S.E. Dowd, E. Hong, and U.G. Mueller Generalized antifungal activity and 454-screening of Pseudonocardia and Amycolatopsis bacteria in nests of fungus-growing ants Proceedings of the National Academy of Sciences of the United States of America 106 2009 17805 17810
-
(2009)
Proceedings of the National Academy of Sciences of the United States of America
, vol.106
, pp. 17805-17810
-
-
Sen, R.1
Ishak, H.D.2
Estrada, E.3
Dowd, S.E.4
Hong, E.5
Mueller, U.G.6
-
45
-
-
33745438016
-
Amplification of the entire kanamycin biosynthetic gene cluster during empirical strain improvement of Streptomyces kanamyceticus
-
DOI 10.1073/pnas.0603251103
-
K. Yanai, T. Murakami, and M.J. Bibb Amplification of the entire kanamycin biosynthetic gene cluster using emphirical strain improvement of Streptomyces kanamyceticus Proceedings of the National Academy of Sciences of the United States of America 103 2006 9661 9666 (Pubitemid 43955881)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.25
, pp. 9661-9666
-
-
Yanai, K.1
Murakami, T.2
Bibb, M.3
|