메뉴 건너뛰기




Volumn 80, Issue 4-5, 2012, Pages 365-388

Genome-wide analysis of lectin receptor-like kinase family from Arabidopsis and rice

Author keywords

Arabidopsis; Genome wide analysis; Lectin receptor like kinase; Motif identification; Phylogenetic analysis; Rice; Stress; Transcriptomics

Indexed keywords

ARABIDOPSIS PROTEIN; ATHLECRK PROTEIN, ARABIDOPSIS; PROTEIN SERINE THREONINE KINASE;

EID: 84867593747     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11103-012-9952-8     Document Type: Article
Times cited : (117)

References (52)
  • 1
    • 35348833591 scopus 로고    scopus 로고
    • When two is better than one
    • Babbitt CC, Haygood R, Wray GA (2007) When two is better than one. Cell 131(2): 225-227.
    • (2007) Cell , vol.131 , Issue.2 , pp. 225-227
    • Babbitt, C.C.1    Haygood, R.2    Wray, G.A.3
  • 3
    • 79956218405 scopus 로고    scopus 로고
    • Stress induced β subunit of heterotrimeric G-proteins from Pisum sativum interacts with mitogen activated protein kinase
    • Bhardwaj D, Sheikh AH, Sinha AK, Tuteja N (2011) Stress induced β subunit of heterotrimeric G-proteins from Pisum sativum interacts with mitogen activated protein kinase. Plant Signal Behav 6: 287-292.
    • (2011) Plant Signal Behav , vol.6 , pp. 287-292
    • Bhardwaj, D.1    Sheikh, A.H.2    Sinha, A.K.3    Tuteja, N.4
  • 4
    • 84856674499 scopus 로고    scopus 로고
    • The Nicotiana attenuata Lectin Receptor Kinase 1 is involved in the perception of insect feeding
    • Bonaventure G (2011) The Nicotiana attenuata Lectin Receptor Kinase 1 is involved in the perception of insect feeding. Plant Signal Behav 6: 1-4.
    • (2011) Plant Signal Behav , vol.6 , pp. 1-4
    • Bonaventure, G.1
  • 5
    • 70350699177 scopus 로고    scopus 로고
    • Arabidopsis L-type lectin receptor kinases: phylogeny, classification, and expression profiles
    • Bouwmeester K, Govers F (2009) Arabidopsis L-type lectin receptor kinases: phylogeny, classification, and expression profiles. J Exp Bot 60: 4383-4396.
    • (2009) J Exp Bot , vol.60 , pp. 4383-4396
    • Bouwmeester, K.1    Govers, F.2
  • 8
    • 0038414033 scopus 로고    scopus 로고
    • Population genetics of tandem trypsin inhibitor genes in Arabidopsis species with contrasting ecology and life history
    • Clauss MJ, Mitchell-Olds T (2003) Population genetics of tandem trypsin inhibitor genes in Arabidopsis species with contrasting ecology and life history. Mol Ecol 12: 1287-1299.
    • (2003) Mol Ecol , vol.12 , pp. 1287-1299
    • Clauss, M.J.1    Mitchell-Olds, T.2
  • 9
    • 71249143463 scopus 로고    scopus 로고
    • A lectin receptor kinase positively regulates aba response during seed germination and is involved in salt and osmotic stress response
    • Deng K, Wang Q, Zeng J, Guo X, Zhao X, Tang D, Liu X (2009) A lectin receptor kinase positively regulates aba response during seed germination and is involved in salt and osmotic stress response. J. Plant Biol 52: 493-500.
    • (2009) J. Plant Biol , vol.52 , pp. 493-500
    • Deng, K.1    Wang, Q.2    Zeng, J.3    Guo, X.4    Zhao, X.5    Tang, D.6    Liu, X.7
  • 10
    • 84860903145 scopus 로고    scopus 로고
    • The Arabidopsis lectin receptor kinase LecRK-V.5 represses stomatal immunity induced by Pseudomonas syringae pv. tomato DC3000
    • doi:10.1371/journal.ppat.1002513
    • Desclos-Theveniau M, Arnaud D, Huang TY, Lin GJC, Chen WY et al (2012) The Arabidopsis lectin receptor kinase LecRK-V. 5 represses stomatal immunity induced by Pseudomonas syringae pv. tomato DC3000. PLoS Pathog 8: e1002513. doi: 10. 1371/journal. ppat. 1002513.
    • (2012) PLoS Pathog , vol.8
    • Desclos-Theveniau, M.1    Arnaud, D.2    Huang, T.Y.3    Lin, G.J.C.4    Chen, W.Y.5
  • 11
    • 0032935861 scopus 로고    scopus 로고
    • ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites
    • Emanuelsson O, Nielsen H, von Heijne G (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci 8: 978-984.
    • (1999) Protein Sci , vol.8 , pp. 978-984
    • Emanuelsson, O.1    Nielsen, H.2    von Heijne, G.3
  • 13
    • 80055000869 scopus 로고    scopus 로고
    • Nicotiana attenuata lectin receptor kinase1 suppresses the insect-mediated inhibition of induced defense responses during Manduca sexta herbivory
    • Gilardoni PA, Hettenhausen C, Baldwin IT, Bonaventure G (2011) Nicotiana attenuata lectin receptor kinase1 suppresses the insect-mediated inhibition of induced defense responses during Manduca sexta herbivory. The Plant Cell 23: 3512-3532.
    • (2011) The Plant Cell , vol.23 , pp. 3512-3532
    • Gilardoni, P.A.1    Hettenhausen, C.2    Baldwin, I.T.3    Bonaventure, G.4
  • 14
    • 0037023349 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. japonica)
    • Goff SA, Ricke D, Lan TH, Presting G, Wang R et al (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. japonica). Science 296: 92-100.
    • (2002) Science , vol.296 , pp. 92-100
    • Goff, S.A.1    Ricke, D.2    Lan, T.H.3    Presting, G.4    Wang, R.5
  • 15
    • 0033102999 scopus 로고    scopus 로고
    • Characterization of the Arabidopsis lecRK-a genes: members of a superfamily encoding putative receptors with an extracellular domain homologous to legume lectins
    • Hervé C, Serres J., Dabos P, Canut H, Barre A, Roug′e P, Lescure B (1999) Characterization of the Arabidopsis lecRK-a genes: members of a superfamily encoding putative receptors with an extracellular domain homologous to legume lectins. Plant Mol Biol 39: 671-682.
    • (1999) Plant Mol Biol , vol.39 , pp. 671-682
    • Hervé, C.1    Serres, J.2    Dabos, P.3    Canut, H.4    Barre, A.5    Roug′e, P.6    Lescure, B.7
  • 16
    • 0029933538 scopus 로고    scopus 로고
    • Characterization of an Arabidopsis thaliana gene that defines a new class of putative plant receptor kinases with an extracellular lectin-like domain
    • Herve C, Dabos P, Galaud JP, Rouge P, Lescure B (1996) Characterization of an Arabidopsis thaliana gene that defines a new class of putative plant receptor kinases with an extracellular lectin-like domain. J Mol Biol 258: 778-788.
    • (1996) J Mol Biol , vol.258 , pp. 778-788
    • Herve, C.1    Dabos, P.2    Galaud, J.P.3    Rouge, P.4    Lescure, B.5
  • 17
    • 0033180288 scopus 로고    scopus 로고
    • Role of lectins (and rhizobial exopolysaccharides) in legume nodulation
    • Hirsch AM (1999) Role of lectins (and rhizobial exopolysaccharides) in legume nodulation. Curr Opin Plant Biol 2: 320-326.
    • (1999) Curr Opin Plant Biol , vol.2 , pp. 320-326
    • Hirsch, A.M.1
  • 18
    • 35148863240 scopus 로고    scopus 로고
    • Gene duplication and the adaptive evolution of a classic genetic switch
    • Hittinger C, Carroll SB (2007) Gene duplication and the adaptive evolution of a classic genetic switch. Nature 449: 677-681.
    • (2007) Nature , vol.449 , pp. 677-681
    • Hittinger, C.1    Carroll, S.B.2
  • 22
    • 77949269548 scopus 로고    scopus 로고
    • Pea lectin receptor-like kinase promotes high salinity stress tolerance in bacteria and expresses in response to stress in planta
    • Joshi A, Hung DQ, Vaid N, Tuteja N (2010) Pea lectin receptor-like kinase promotes high salinity stress tolerance in bacteria and expresses in response to stress in planta. Glycoconj J 27: 133-150.
    • (2010) Glycoconj J , vol.27 , pp. 133-150
    • Joshi, A.1    Hung, D.Q.2    Vaid, N.3    Tuteja, N.4
  • 23
    • 55849138714 scopus 로고    scopus 로고
    • NbLRK1, a lectin-like receptor kinase protein of Nicotiana benthamiana, interacts with Phytophthora infestans INF1 elicitin and mediates INF1-induced cell death
    • doi:10.1007/s00425-008-0797-y
    • Kanzaki H, Saitoh H, Takahashi Y, Berberich T, Ito A, Kamoun S, Terauchi R (2008) NbLRK1, a lectin-like receptor kinase protein of Nicotiana benthamiana, interacts with Phytophthora infestans INF1 elicitin and mediates INF1-induced cell death. Planta. doi: 10. 1007/s00425-008-0797-y.
    • (2008) Planta
    • Kanzaki, H.1    Saitoh, H.2    Takahashi, Y.3    Berberich, T.4    Ito, A.5    Kamoun, S.6    Terauchi, R.7
  • 24
    • 0026490909 scopus 로고
    • An Arabidopsis serine/threonine kinase homologue with an epidermal growth factor repeat selected in yeast for its specificity for a thylakoid membrane protein
    • Kohorn BD, Lane S, Smith T A (1992) An Arabidopsis serine/threonine kinase homologue with an epidermal growth factor repeat selected in yeast for its specificity for a thylakoid membrane protein. Proc Natl Acad Sci USA 89(22): 10989-10992.
    • (1992) Proc Natl Acad Sci USA , vol.89 , Issue.22 , pp. 10989-10992
    • Kohorn, B.D.1    Lane, S.2    Smith, T.A.3
  • 25
    • 0027549404 scopus 로고
    • Sorghum phosphoenolpyruvate carboxylase gene family: structure, function and molecular evolution
    • Lepiniec L, Keryer E, Philippe H, Gadal P, Crétin C (1993) Sorghum phosphoenolpyruvate carboxylase gene family: structure, function and molecular evolution. Plant Mol Biol 21: 487-502.
    • (1993) Plant Mol Biol , vol.21 , pp. 487-502
    • Lepiniec, L.1    Keryer, E.2    Philippe, H.3    Gadal, P.4    Crétin, C.5
  • 26
    • 0037136417 scopus 로고    scopus 로고
    • Principles of structures of animal and plant lectins
    • Loris R (2002) Principles of structures of animal and plant lectins. Biochim Biophys Acta 1572: 198-208.
    • (2002) Biochim Biophys Acta , vol.1572 , pp. 198-208
    • Loris, R.1
  • 27
    • 39749162847 scopus 로고    scopus 로고
    • Calcium- and salt-stress signaling in plants: shedding light on SOS pathway
    • Mahajan S, Pandey GK, Tuteja N (2008) Calcium- and salt-stress signaling in plants: shedding light on SOS pathway. Arch Biochem Biophys 471: 146-158.
    • (2008) Arch Biochem Biophys , vol.471 , pp. 146-158
    • Mahajan, S.1    Pandey, G.K.2    Tuteja, N.3
  • 28
    • 34547503841 scopus 로고    scopus 로고
    • Structural modules for receptor dimerization in the S-locus receptor kinase extracellular domain
    • Naithani S, Chookajorn T, Ripoll DR, Nasrallah JB (2007) Structural modules for receptor dimerization in the S-locus receptor kinase extracellular domain. Proc Natl Acad Sci USA 104: 12211-12216.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 12211-12216
    • Naithani, S.1    Chookajorn, T.2    Ripoll, D.R.3    Nasrallah, J.B.4
  • 29
    • 0347052749 scopus 로고    scopus 로고
    • Characterization of four lectin-like receptor kinases expressed in roots of medicago truncatula. structure, location, regulation of expression, and potential role in the symbiosis with sinorhizobium meliloti
    • Navarro-Gochicoa MT, Camut S, Timmers ACJ, Niebel A, Herve C, Boutet E, Bono JJ, Imberty A, Cullimore JV (2003) Characterization of four lectin-like receptor kinases expressed in roots of medicago truncatula. structure, location, regulation of expression, and potential role in the symbiosis with sinorhizobium meliloti. Plant Physiol 133: 1893-1910.
    • (2003) Plant Physiol , vol.133 , pp. 1893-1910
    • Navarro-Gochicoa, M.T.1    Camut, S.2    Timmers, A.C.J.3    Niebel, A.4    Herve, C.5    Boutet, E.6    Bono, J.J.7    Imberty, A.8    Cullimore, J.V.9
  • 30
    • 0036095292 scopus 로고    scopus 로고
    • A receptor-like protein kinase with a lectin-like domain from lombardy poplar: gene expression in response to wounding and characterization of phosphorylation activity
    • Nishiguchi NM, Yoshida YK, Sumizono ST, Tazaki TK (2002) A receptor-like protein kinase with a lectin-like domain from lombardy poplar: gene expression in response to wounding and characterization of phosphorylation activity. Mol Gen Genomics 267: 506-514.
    • (2002) Mol Gen Genomics , vol.267 , pp. 506-514
    • Nishiguchi, N.M.1    Yoshida, Y.K.2    Sumizono, S.T.3    Tazaki, T.K.4
  • 32
    • 0033775584 scopus 로고    scopus 로고
    • Salicylic acid induces the expression of a number of receptor-like kinase genes in Arabidopsis thaliana
    • Ohtake Y, Takahashi T, Komeda Y (2000) Salicylic acid induces the expression of a number of receptor-like kinase genes in Arabidopsis thaliana. Plant Cell Physiol 41: 1038-1044.
    • (2000) Plant Cell Physiol , vol.41 , pp. 1038-1044
    • Ohtake, Y.1    Takahashi, T.2    Komeda, Y.3
  • 34
    • 56749098074 scopus 로고    scopus 로고
    • Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing
    • Pan Q, Shai O, Lee LJ, Frey BJ, Blencowe BJ (2008) Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing. Nat Genet 40: 1413-1415.
    • (2008) Nat Genet , vol.40 , pp. 1413-1415
    • Pan, Q.1    Shai, O.2    Lee, L.J.3    Frey, B.J.4    Blencowe, B.J.5
  • 35
    • 40549146278 scopus 로고    scopus 로고
    • The TAIR database
    • Poole R (2007) The TAIR database. Methods Mol Biol 406: 179-212.
    • (2007) Methods Mol Biol , vol.406 , pp. 179-212
    • Poole, R.1
  • 36
    • 0036267255 scopus 로고    scopus 로고
    • Expression of an Arabidopsis lectin kinase receptor gene, lecRK-a1, is induced during senescence, wounding and in response to oligogalacturonic acids
    • Riou C, Herve C, Pacquit V, Dabos P, Lescure B (2002) Expression of an Arabidopsis lectin kinase receptor gene, lecRK-a1, is induced during senescence, wounding and in response to oligogalacturonic acids. Plant Physiol Biochem 40: 431-438.
    • (2002) Plant Physiol Biochem , vol.40 , pp. 431-438
    • Riou, C.1    Herve, C.2    Pacquit, V.3    Dabos, P.4    Lescure, B.5
  • 37
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 39
    • 0035909867 scopus 로고    scopus 로고
    • Plant receptor-like kinase gene family: diversity, function, and signaling
    • RE22. (doi: 10. 1126/stke. 2001. 113. re22)
    • Shiu SH, Bleecker AB (2001) Plant receptor-like kinase gene family: diversity, function, and signaling. Sci STKE 1131: RE22. (doi: 10. 1126/stke. 2001. 113. re22).
    • (2001) Sci STKE , vol.1131
    • Shiu, S.H.1    Bleecker, A.B.2
  • 40
    • 0038460040 scopus 로고    scopus 로고
    • Expansion of the receptor-like kinase/pelle gene familyand receptor-like proteins in Arabidopsis
    • Shiu SH, Bleecker AB (2003) Expansion of the receptor-like kinase/pelle gene familyand receptor-like proteins in Arabidopsis. Plant Physiol 132: 530-543.
    • (2003) Plant Physiol , vol.132 , pp. 530-543
    • Shiu, S.H.1    Bleecker, A.B.2
  • 42
    • 79956226797 scopus 로고    scopus 로고
    • Mitogen-activated protein kinase signalling in plants under abiotic stress
    • Sinha AK, Jaggi M, Raghuram B, Tuteja N (2011) Mitogen-activated protein kinase signalling in plants under abiotic stress. Plant Signal Behav 6: 196-203.
    • (2011) Plant Signal Behav , vol.6 , pp. 196-203
    • Sinha, A.K.1    Jaggi, M.2    Raghuram, B.3    Tuteja, N.4
  • 43
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods
    • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, and Kumar S (2011) MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance and maximum parsimony methods. Mol Biol Evol 28(10): 2731-2739.
    • (2011) Mol Biol Evol , vol.28 , Issue.10 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3    Stecher, G.4    Nei, M.5    Kumar, S.6
  • 44
    • 0345534771 scopus 로고    scopus 로고
    • The PAN module: the N-terminal domains of plasminogen and hepatocyte growth factor are homologous with the apple domains of the prekallikrein family and with a novel domain found in numerous nematode proteins
    • Tordai H, Banyai L, Patthy L (1999) The PAN module: the N-terminal domains of plasminogen and hepatocyte growth factor are homologous with the apple domains of the prekallikrein family and with a novel domain found in numerous nematode proteins. FEBS Lett 461: 63-67.
    • (1999) FEBS Lett , vol.461 , pp. 63-67
    • Tordai, H.1    Banyai, L.2    Patthy, L.3
  • 45
    • 45049085656 scopus 로고    scopus 로고
    • A lectin receptor-like kinase is required for pollen development in Arabidopsis
    • Wan J, Patel A, Mathieu M, Kim SY, Xu D, Stacey G (2008) A lectin receptor-like kinase is required for pollen development in Arabidopsis. Plant Mol Biol 67: 469-482.
    • (2008) Plant Mol Biol , vol.67 , pp. 469-482
    • Wan, J.1    Patel, A.2    Mathieu, M.3    Kim, S.Y.4    Xu, D.5    Stacey, G.6
  • 46
    • 64149089393 scopus 로고    scopus 로고
    • Genome-wide identification of lineage-specific genes in Arabidopsis, Oryza and Populus
    • Yang X, Jawdy S, Tschaplinski TJ, Tuskan GA (2009) Genome-wide identification of lineage-specific genes in Arabidopsis, Oryza and Populus. Genomics 93: 473-480.
    • (2009) Genomics , vol.93 , pp. 473-480
    • Yang, X.1    Jawdy, S.2    Tschaplinski, T.J.3    Tuskan, G.A.4
  • 47
    • 0037023384 scopus 로고    scopus 로고
    • A draft sequence of the rice genome (Oryza sativa L. ssp. indica)
    • Yu J, Hu S, Wang J, Wong GK, Li S et al (2002) A draft sequence of the rice genome (Oryza sativa L. ssp. indica). Science 296: 79-92.
    • (2002) Science , vol.296 , pp. 79-92
    • Yu, J.1    Hu, S.2    Wang, J.3    Wong, G.K.4    Li, S.5
  • 48
    • 1942505330 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions
    • Yu CS, Lin CJ, Hwang JK (2004) Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions. Protein Sci 13: 1402-1406.
    • (2004) Protein Sci , vol.13 , pp. 1402-1406
    • Yu, C.S.1    Lin, C.J.2    Hwang, J.K.3
  • 49
    • 20144366003 scopus 로고    scopus 로고
    • The genomes of Oryza sativa: a history of duplications
    • Yu J, Wang J, Lin W, Li S, Li H et al (2005) The genomes of Oryza sativa: a history of duplications. PLoS Biol 3: e38.
    • (2005) PLoS Biol , vol.3
    • Yu, J.1    Wang, J.2    Lin, W.3    Li, S.4    Li, H.5
  • 51
    • 80053520371 scopus 로고    scopus 로고
    • The roles and evolutionary patterns of intronless genes in deuterostomes
    • Zou M, Guo B, He S (2011) The roles and evolutionary patterns of intronless genes in deuterostomes. Comp Funct Genomics 2011: 1-8.
    • (2011) Comp Funct Genomics , vol.2011 , pp. 1-8
    • Zou, M.1    Guo, B.2    He, S.3
  • 52
    • 1642407625 scopus 로고    scopus 로고
    • Molecular cloning and characterization of GhLecrk, a novel kinase gene with lectin-like domain from Gossypium hirsutum
    • Zuo K, Zhao J, Wang J, Sun X, Tan K (2004) Molecular cloning and characterization of GhLecrk, a novel kinase gene with lectin-like domain from Gossypium hirsutum. DNA Seq 15: 58-65.
    • (2004) DNA Seq , vol.15 , pp. 58-65
    • Zuo, K.1    Zhao, J.2    Wang, J.3    Sun, X.4    Tan, K.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.