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Volumn 7, Issue 9, 2012, Pages

Population Diversity of Rice Stripe Virus-Derived siRNAs in Three Different Hosts and RNAi-Based Antiviral Immunity in Laodelphgax striatellus

Author keywords

[No Author keywords available]

Indexed keywords

ARGONAUTE 2 PROTEIN; DICER; DOUBLE STRANDED RNA; SMALL INTERFERING RNA; VIRUS RNA;

EID: 84866997200     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0046238     Document Type: Article
Times cited : (83)

References (47)
  • 1
    • 36749013655 scopus 로고    scopus 로고
    • Plant virus transmission from the insect point of view
    • Hohn T, (2007) Plant virus transmission from the insect point of view. Proc Natl Acad Sci U S A 104: 17905-17906.
    • (2007) Proc Natl Acad Sci U S A , vol.104 , pp. 17905-17906
    • Hohn, T.1
  • 2
    • 77956170809 scopus 로고    scopus 로고
    • RNA-based antiviral immunity
    • Ding SW, (2010) RNA-based antiviral immunity. Nat Rev Immunol 10: 632-644.
    • (2010) Nat Rev Immunol , vol.10 , pp. 632-644
    • Ding, S.W.1
  • 3
    • 33744494279 scopus 로고    scopus 로고
    • Essential function in vivo for Dicer-2 in host defense against RNA viruses in drosophila
    • Galiana-Arnoux D, Dostert C, Schneemann A, Hoffmann JA, Imler JL, (2006) Essential function in vivo for Dicer-2 in host defense against RNA viruses in drosophila. Nat Immunol 7: 590-597.
    • (2006) Nat Immunol , vol.7 , pp. 590-597
    • Galiana-Arnoux, D.1    Dostert, C.2    Schneemann, A.3    Hoffmann, J.A.4    Imler, J.L.5
  • 4
    • 33645979325 scopus 로고    scopus 로고
    • RNA interference directs innate immunity against viruses in adult Drosophila
    • Wang XH, Aliyari R, Li WX, Li HW, Kim K, et al. (2006) RNA interference directs innate immunity against viruses in adult Drosophila. Science 312: 452-454.
    • (2006) Science , vol.312 , pp. 452-454
    • Wang, X.H.1    Aliyari, R.2    Li, W.X.3    Li, H.W.4    Kim, K.5
  • 5
    • 79952577601 scopus 로고    scopus 로고
    • Global analysis of the transcriptional response of whitefly to Tomato yellow leaf curl China virus reveals the relationship of coevolved adaptations
    • Luan JB, Li JM, Varela N, Wang YL, Li FF, et al. (2011) Global analysis of the transcriptional response of whitefly to Tomato yellow leaf curl China virus reveals the relationship of coevolved adaptations. J Virol 85: 3330-3340.
    • (2011) J Virol , vol.85 , pp. 3330-3340
    • Luan, J.B.1    Li, J.M.2    Varela, N.3    Wang, Y.L.4    Li, F.F.5
  • 6
    • 34547587566 scopus 로고    scopus 로고
    • Antiviral immunity directed by small RNAs
    • Ding SW, Voinnet O, (2007) Antiviral immunity directed by small RNAs. Cell 130: 413-426.
    • (2007) Cell , vol.130 , pp. 413-426
    • Ding, S.W.1    Voinnet, O.2
  • 7
    • 33646137364 scopus 로고    scopus 로고
    • The diversity of RNA silencing pathways in plants
    • Brodersen P, Voinnet O, (2006) The diversity of RNA silencing pathways in plants. Trends Genet 22: 268-280.
    • (2006) Trends Genet , vol.22 , pp. 268-280
    • Brodersen, P.1    Voinnet, O.2
  • 8
    • 41349114789 scopus 로고    scopus 로고
    • Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5′ terminal nucleotide
    • Mi S, Cai T, Hu Y, Chen Y, Hodges E, et al. (2008) Sorting of small RNAs into Arabidopsis argonaute complexes is directed by the 5′ terminal nucleotide. Cell 133: 116-127.
    • (2008) Cell , vol.133 , pp. 116-127
    • Mi, S.1    Cai, T.2    Hu, Y.3    Chen, Y.4    Hodges, E.5
  • 9
    • 33746561720 scopus 로고    scopus 로고
    • An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs
    • Bouche N, Lauressergues D, Gasciolli V, Vaucheret H, (2006) An antagonistic function for Arabidopsis DCL2 in development and a new function for DCL4 in generating viral siRNAs. EMBO J 25: 3347-3356.
    • (2006) EMBO J , vol.25 , pp. 3347-3356
    • Bouche, N.1    Lauressergues, D.2    Gasciolli, V.3    Vaucheret, H.4
  • 10
    • 33745916446 scopus 로고    scopus 로고
    • Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense
    • Deleris A, Gallego-Bartolome J, Bao J, Kasschau KD, Carrington JC, et al. (2006) Hierarchical action and inhibition of plant Dicer-like proteins in antiviral defense. Science 313: 68-71.
    • (2006) Science , vol.313 , pp. 68-71
    • Deleris, A.1    Gallego-Bartolome, J.2    Bao, J.3    Kasschau, K.D.4    Carrington, J.C.5
  • 11
    • 33750513190 scopus 로고    scopus 로고
    • RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway
    • Fusaro AF, Matthew L, Smith NA, Curtin SJ, Dedic-Hagan J, et al. (2006) RNA interference-inducing hairpin RNAs in plants act through the viral defence pathway. EMBO Rep 7: 1168-1175.
    • (2006) EMBO Rep , vol.7 , pp. 1168-1175
    • Fusaro, A.F.1    Matthew, L.2    Smith, N.A.3    Curtin, S.J.4    Dedic-Hagan, J.5
  • 12
    • 34547600663 scopus 로고    scopus 로고
    • Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs
    • Diaz-Pendon JA, Li F, Li WX, Ding SW, (2007) Suppression of antiviral silencing by cucumber mosaic virus 2b protein in Arabidopsis is associated with drastically reduced accumulation of three classes of viral small interfering RNAs. Plant Cell 19: 2053-2063.
    • (2007) Plant Cell , vol.19 , pp. 2053-2063
    • Diaz-Pendon, J.A.1    Li, F.2    Li, W.X.3    Ding, S.W.4
  • 13
    • 33751120715 scopus 로고    scopus 로고
    • The RNA silencing endonuclease Argonaute 2 mediates specific antiviral immunity in Drosophila melanogaster
    • van Rij RP, Saleh MC, Berry B, Foo C, Houk A, et al. (2006) The RNA silencing endonuclease Argonaute 2 mediates specific antiviral immunity in Drosophila melanogaster. Genes Dev 20: 2985-2995.
    • (2006) Genes Dev , vol.20 , pp. 2985-2995
    • van Rij, R.P.1    Saleh, M.C.2    Berry, B.3    Foo, C.4    Houk, A.5
  • 14
    • 79958860044 scopus 로고    scopus 로고
    • RNA interference in Nilaparvata lugens (Homoptera: Delphacidae) based on dsRNA ingestion
    • Li J, Chen Q, Lin Y, Jiang T, Wu G, et al. (2011) RNA interference in Nilaparvata lugens (Homoptera: Delphacidae) based on dsRNA ingestion. Pest Manag Sci 67: 852-859.
    • (2011) Pest Manag Sci , vol.67 , pp. 852-859
    • Li, J.1    Chen, Q.2    Lin, Y.3    Jiang, T.4    Wu, G.5
  • 15
    • 65549144244 scopus 로고    scopus 로고
    • Genetic diversity and population structure of Rice stripe virus in China
    • Wei TY, Yang JG, Liao FR, Gao FL, Lu LM, et al. (2009) Genetic diversity and population structure of Rice stripe virus in China. J Gen Virol 90: 1025-1034.
    • (2009) J Gen Virol , vol.90 , pp. 1025-1034
    • Wei, T.Y.1    Yang, J.G.2    Liao, F.R.3    Gao, F.L.4    Lu, L.M.5
  • 17
    • 0029661735 scopus 로고    scopus 로고
    • Biology and epidemiology of rice viruses
    • Hibino H, (1996) Biology and epidemiology of rice viruses. Annu Rev Phytopathol 34: 249-274.
    • (1996) Annu Rev Phytopathol , vol.34 , pp. 249-274
    • Hibino, H.1
  • 18
    • 0031684262 scopus 로고    scopus 로고
    • Biology and molecular biology of viruses in the genus Tenuivirus
    • Falk BW, Tsai JH, (1998) Biology and molecular biology of viruses in the genus Tenuivirus. Annual Review of Phytopathology 36: 139-163.
    • (1998) Annual Review of Phytopathology , vol.36 , pp. 139-163
    • Falk, B.W.1    Tsai, J.H.2
  • 19
    • 80054811675 scopus 로고    scopus 로고
    • Five proteins of Laodelphax striatellus are potentially involved in the interactions between Rice stripe virus and vector
    • Li S, Xiong RY, Wang XF, Zhou YJ, (2011) Five proteins of Laodelphax striatellus are potentially involved in the interactions between Rice stripe virus and vector. Plos One 6.
    • (2011) Plos One , vol.6
    • Li, S.1    Xiong, R.Y.2    Wang, X.F.3    Zhou, Y.J.4
  • 20
    • 49449105359 scopus 로고    scopus 로고
    • Nicotiana benthamiana: its history and future as a model for plant-pathogen interactions
    • Goodin MM, Zaitlin D, Naidu RA, Lommel SA, (2008) Nicotiana benthamiana: its history and future as a model for plant-pathogen interactions. Mol Plant Microbe Interact 21: 1015-1026.
    • (2008) Mol Plant Microbe Interact , vol.21 , pp. 1015-1026
    • Goodin, M.M.1    Zaitlin, D.2    Naidu, R.A.3    Lommel, S.A.4
  • 21
    • 77953324674 scopus 로고    scopus 로고
    • Characterization of siRNAs derived from Rice stripe virus in infected rice plants by deep sequencing
    • Yan F, Zhang H, Adams MJ, Yang J, Peng J, et al. (2010) Characterization of siRNAs derived from Rice stripe virus in infected rice plants by deep sequencing. Arch Virol 155: 935-940.
    • (2010) Arch Virol , vol.155 , pp. 935-940
    • Yan, F.1    Zhang, H.2    Adams, M.J.3    Yang, J.4    Peng, J.5
  • 22
    • 79951778843 scopus 로고    scopus 로고
    • Characterization of small interfering RNAs derived from the geminivirus/betasatellite complex using deep sequencing
    • Yang X, Wang Y, Guo W, Xie Y, Xie Q, et al. (2011) Characterization of small interfering RNAs derived from the geminivirus/betasatellite complex using deep sequencing. Plos One 6: e16928.
    • (2011) Plos One , vol.6
    • Yang, X.1    Wang, Y.2    Guo, W.3    Xie, Y.4    Xie, Q.5
  • 23
    • 84355162862 scopus 로고    scopus 로고
    • Cucumber mosaic virus suppressor 2b binds to AGO4-related small RNAs and impairs AGO4 activities
    • Hamera S, Song X, Su L, Chen X, Fang R, (2012) Cucumber mosaic virus suppressor 2b binds to AGO4-related small RNAs and impairs AGO4 activities. Plant J 69: 104-115.
    • (2012) Plant J , vol.69 , pp. 104-115
    • Hamera, S.1    Song, X.2    Su, L.3    Chen, X.4    Fang, R.5
  • 24
    • 34249805994 scopus 로고    scopus 로고
    • The coming of age for Piwi proteins
    • Seto AG, Kingston RE, Lau NC, (2007) The coming of age for Piwi proteins. Mol Cell 26: 603-609.
    • (2007) Mol Cell , vol.26 , pp. 603-609
    • Seto, A.G.1    Kingston, R.E.2    Lau, N.C.3
  • 25
    • 58449134534 scopus 로고    scopus 로고
    • Small silencing RNAs: an expanding universe
    • Ghildiyal M, Zamore PD, (2009) Small silencing RNAs: an expanding universe. Nature Reviews Genetics 10: 94-108.
    • (2009) Nature Reviews Genetics , vol.10 , pp. 94-108
    • Ghildiyal, M.1    Zamore, P.D.2
  • 26
    • 0034708215 scopus 로고    scopus 로고
    • EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans
    • Smardon A, Spoerke JM, Stacey SC, Klein ME, Mackin N, et al. (2000) EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans. Curr Biol 10: 169-178.
    • (2000) Curr Biol , vol.10 , pp. 169-178
    • Smardon, A.1    Spoerke, J.M.2    Stacey, S.C.3    Klein, M.E.4    Mackin, N.5
  • 27
    • 0035900651 scopus 로고    scopus 로고
    • On the role of RNA amplification in dsRNA-triggered gene silencing
    • Sijen T, Fleenor J, Simmer F, Thijssen KL, Parrish S, et al. (2001) On the role of RNA amplification in dsRNA-triggered gene silencing. Cell 107: 465-476.
    • (2001) Cell , vol.107 , pp. 465-476
    • Sijen, T.1    Fleenor, J.2    Simmer, F.3    Thijssen, K.L.4    Parrish, S.5
  • 28
    • 0037031152 scopus 로고    scopus 로고
    • Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi
    • Simmer F, Tijsterman M, Parrish S, Koushika SP, Nonet ML, et al. (2002) Loss of the putative RNA-directed RNA polymerase RRF-3 makes C. elegans hypersensitive to RNAi. Curr Biol 12: 1317-1319.
    • (2002) Curr Biol , vol.12 , pp. 1317-1319
    • Simmer, F.1    Tijsterman, M.2    Parrish, S.3    Koushika, S.P.4    Nonet, M.L.5
  • 29
    • 50949121524 scopus 로고    scopus 로고
    • Viral genome methylation as an epigenetic defense against geminiviruses
    • Raja P, Sanville BC, Buchmann RC, Bisaro DM, (2008) Viral genome methylation as an epigenetic defense against geminiviruses. J Virol 82: 8997-9007.
    • (2008) J Virol , vol.82 , pp. 8997-9007
    • Raja, P.1    Sanville, B.C.2    Buchmann, R.C.3    Bisaro, D.M.4
  • 30
    • 32644436065 scopus 로고    scopus 로고
    • Molecular characterization of geminivirus-derived small RNAs in different plant species
    • Akbergenov R, Si-Ammour A, Blevins T, Amin I, Kutter C, et al. (2006) Molecular characterization of geminivirus-derived small RNAs in different plant species. Nucleic Acids Research 34: 462-471.
    • (2006) Nucleic Acids Research , vol.34 , pp. 462-471
    • Akbergenov, R.1    Si-Ammour, A.2    Blevins, T.3    Amin, I.4    Kutter, C.5
  • 31
    • 44349094874 scopus 로고    scopus 로고
    • The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins
    • Takeda A, Iwasaki S, Watanabe T, Utsumi M, Watanabe Y, (2008) The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins. Plant Cell Physiol 49: 493-500.
    • (2008) Plant Cell Physiol , vol.49 , pp. 493-500
    • Takeda, A.1    Iwasaki, S.2    Watanabe, T.3    Utsumi, M.4    Watanabe, Y.5
  • 32
    • 73249125240 scopus 로고    scopus 로고
    • Rice microRNA effector complexes and targets
    • Wu L, Zhang Q, Zhou H, Ni F, Wu X, et al. (2009) Rice microRNA effector complexes and targets. Plant Cell 21: 3421-3435.
    • (2009) Plant Cell , vol.21 , pp. 3421-3435
    • Wu, L.1    Zhang, Q.2    Zhou, H.3    Ni, F.4    Wu, X.5
  • 33
    • 55749088651 scopus 로고    scopus 로고
    • Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1
    • Qu F, Ye X, Morris TJ, (2008) Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1. Proc Natl Acad Sci U S A 105: 14732-14737.
    • (2008) Proc Natl Acad Sci U S A , vol.105 , pp. 14732-14737
    • Qu, F.1    Ye, X.2    Morris, T.J.3
  • 34
    • 0036009918 scopus 로고    scopus 로고
    • Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance
    • Morel JB, Godon C, Mourrain P, Beclin C, Boutet S, et al. (2002) Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance. Plant Cell 14: 629-639.
    • (2002) Plant Cell , vol.14 , pp. 629-639
    • Morel, J.B.1    Godon, C.2    Mourrain, P.3    Beclin, C.4    Boutet, S.5
  • 35
    • 34447642555 scopus 로고    scopus 로고
    • Sorting of Drosophila small silencing RNAs
    • Tomari Y, Du T, Zamore PD, (2007) Sorting of Drosophila small silencing RNAs. Cell 130: 299-308.
    • (2007) Cell , vol.130 , pp. 299-308
    • Tomari, Y.1    Du, T.2    Zamore, P.D.3
  • 36
    • 75649129754 scopus 로고    scopus 로고
    • Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway
    • Ghildiyal M, Xu J, Seitz H, Weng Z, Zamore PD, (2010) Sorting of Drosophila small silencing RNAs partitions microRNA* strands into the RNA interference pathway. RNA 16: 43-56.
    • (2010) RNA , vol.16 , pp. 43-56
    • Ghildiyal, M.1    Xu, J.2    Seitz, H.3    Weng, Z.4    Zamore, P.D.5
  • 37
    • 0024763193 scopus 로고
    • Complementary DNA cloning and hybridization analysis of Maize stripe virus RNAs
    • Falk BW, Klaassen VA, Tsai JH, (1989) Complementary DNA cloning and hybridization analysis of Maize stripe virus RNAs. Virology 173: 338-342.
    • (1989) Virology , vol.173 , pp. 338-342
    • Falk, B.W.1    Klaassen, V.A.2    Tsai, J.H.3
  • 38
    • 76249093088 scopus 로고    scopus 로고
    • RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
    • Wang XB, Wu Q, Ito T, Cillo F, Li WX, et al. (2010) RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana. Proc Natl Acad Sci U S A 107: 484-489.
    • (2010) Proc Natl Acad Sci U S A , vol.107 , pp. 484-489
    • Wang, X.B.1    Wu, Q.2    Ito, T.3    Cillo, F.4    Li, W.X.5
  • 39
    • 79952415597 scopus 로고    scopus 로고
    • Antiviral RNA interference responses induced by Semliki forest virus infection of mosquito cells: characterization, origin, and frequency-dependent functions of virus-derived small interfering RNAs
    • Siu RW, Fragkoudis R, Simmonds P, Donald CL, Chase-Topping ME, et al. (2011) Antiviral RNA interference responses induced by Semliki forest virus infection of mosquito cells: characterization, origin, and frequency-dependent functions of virus-derived small interfering RNAs. J Virol 85: 2907-2917.
    • (2011) J Virol , vol.85 , pp. 2907-2917
    • Siu, R.W.1    Fragkoudis, R.2    Simmonds, P.3    Donald, C.L.4    Chase-Topping, M.E.5
  • 41
    • 84856554181 scopus 로고    scopus 로고
    • RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus
    • Jiang L, Qian D, Zheng H, Meng LY, Chen J, et al. (2012) RNA-dependent RNA polymerase 6 of rice (Oryza sativa) plays role in host defense against negative-strand RNA virus, Rice stripe virus. Virus Res 163: 512-519.
    • (2012) Virus Res , vol.163 , pp. 512-519
    • Jiang, L.1    Qian, D.2    Zheng, H.3    Meng, L.Y.4    Chen, J.5
  • 42
    • 78650145074 scopus 로고    scopus 로고
    • Transcriptome analysis of the brown planthopper Nilaparvata lugens
    • Xue J, Bao YY, Li BL, Cheng YB, Peng ZY, et al. (2010) Transcriptome analysis of the brown planthopper Nilaparvata lugens. Plos One 5: e14233.
    • (2010) Plos One , vol.5
    • Xue, J.1    Bao, Y.Y.2    Li, B.L.3    Cheng, Y.B.4    Peng, Z.Y.5
  • 43
    • 84860490291 scopus 로고    scopus 로고
    • Transcriptome and comparative gene expression analysis of Sogatella furcifera (Horvath) in response to Southern rice black-streaked dwarf virus
    • Xu Y, Zhou W, Zhou Y, Wu J, Zhou X, (2012) Transcriptome and comparative gene expression analysis of Sogatella furcifera (Horvath) in response to Southern rice black-streaked dwarf virus. Plos One 7: e36238.
    • (2012) Plos One , vol.7
    • Xu, Y.1    Zhou, W.2    Zhou, Y.3    Wu, J.4    Zhou, X.5
  • 44
    • 57349168102 scopus 로고    scopus 로고
    • Identification of a movement protein of the tenuivirus Rice stripe virus
    • Xiong R, Wu J, Zhou Y, Zhou X, (2008) Identification of a movement protein of the tenuivirus Rice stripe virus. J Virol 82: 12304-12311.
    • (2008) J Virol , vol.82 , pp. 12304-12311
    • Xiong, R.1    Wu, J.2    Zhou, Y.3    Zhou, X.4
  • 45
    • 67650711615 scopus 로고    scopus 로고
    • SOAP2: an improved ultrafast tool for short read alignment
    • Li R, Yu C, Li Y, Lam TW, Yiu SM, et al. (2009) SOAP2: an improved ultrafast tool for short read alignment. Bioinformatics 25: 1966-1967.
    • (2009) Bioinformatics , vol.25 , pp. 1966-1967
    • Li, R.1    Yu, C.2    Li, Y.3    Lam, T.W.4    Yiu, S.M.5
  • 46
    • 63749087829 scopus 로고    scopus 로고
    • Characterization and subcellular localization of an RNA silencing suppressor encoded by Rice stripe tenuivirus
    • Xiong R, Wu J, Zhou Y, Zhou X, (2009) Characterization and subcellular localization of an RNA silencing suppressor encoded by Rice stripe tenuivirus. Virology 387: 29-40.
    • (2009) Virology , vol.387 , pp. 29-40
    • Xiong, R.1    Wu, J.2    Zhou, Y.3    Zhou, X.4
  • 47
    • 77952072975 scopus 로고    scopus 로고
    • Massively parallel pyrosequencing-based transcriptome analyses of small brown planthopper (Laodelphax striatellus), a vector insect transmitting rice stripe virus (RSV)
    • Zhang F, Guo H, Zheng H, Zhou T, Zhou Y, et al. (2010) Massively parallel pyrosequencing-based transcriptome analyses of small brown planthopper (Laodelphax striatellus), a vector insect transmitting rice stripe virus (RSV). Bmc Genomics 11: 303.
    • (2010) Bmc Genomics , vol.11 , pp. 303
    • Zhang, F.1    Guo, H.2    Zheng, H.3    Zhou, T.4    Zhou, Y.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.