-
1
-
-
33646191642
-
Uncoupled production of ta-siRNAs in hypomorphic rdr6 and sgs3 mutants uncovers a role for TAS3 in AGO7-DCL4-DRB4-mediated control of leaf morphology
-
Adenot X, Elmayan T, Lauressergues D, Boutet S, Bouché N, Gasciolli V, Vaucheret H (2006) Uncoupled production of ta-siRNAs in hypomorphic rdr6 and sgs3 mutants uncovers a role for TAS3 in AGO7-DCL4-DRB4-mediated control of leaf morphology. Curr Biol 16: 927-932
-
(2006)
Curr Biol
, vol.16
, pp. 927-932
-
-
Adenot, X.1
Elmayan, T.2
Lauressergues, D.3
Boutet, S.4
Bouché, N.5
Gasciolli, V.6
Vaucheret, H.7
-
2
-
-
32644436065
-
Molecular characterization of geminivirus-derived small RNAs in different plant species
-
Akbergenov R, Si-Ammour A, Blevins T, Amin I, Kutter C, Vanderschuren H, Zhang P, Gruissem W, Meins Jr F, Hohn T, Pooggin MM (2006) Molecular characterization of geminivirus-derived small RNAs in different plant species. Nucleic Acids Res 34: 462-471
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 462-471
-
-
Akbergenov, R.1
Si-Ammour, A.2
Blevins, T.3
Amin, I.4
Kutter, C.5
Vanderschuren, H.6
Zhang, P.7
Gruissem, W.8
Meins Jr., F.9
Hohn, T.10
Pooggin, M.M.11
-
3
-
-
0037117416
-
A branched pathway for transgene-induced RNA silencing in plants
-
Béclin C, Boutet S, Waterhouse P, Vaucheret H (2002) A branched pathway for transgene-induced RNA silencing in plants. Curr Biol 12: 684-688
-
(2002)
Curr Biol
, vol.12
, pp. 684-688
-
-
Béclin, C.1
Boutet, S.2
Waterhouse, P.3
Vaucheret, H.4
-
4
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
-
Borsani O, Zhu J, Verslues PE, Sunkar R, Zhu JK (2005) Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell 123: 1279-1291
-
(2005)
Cell
, vol.123
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.K.5
-
5
-
-
0037718347
-
Arabidopsis HEN1: A genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance
-
Boutet S, Vazquez F, Liu J, Béclin C, Fagard M, Gratias A, Morel JB, Vaucheret H (2003) Arabidopsis HEN1: a genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance. Curr Biol 13: 843-848
-
(2003)
Curr Biol
, vol.13
, pp. 843-848
-
-
Boutet, S.1
Vazquez, F.2
Liu, J.3
Béclin, C.4
Fagard, M.5
Gratias, A.6
Morel, J.B.7
Vaucheret, H.8
-
6
-
-
1542344324
-
Redundancy of the two dicer genes in transgene-induced posttranscriptional gene silencing in Neurospora crassa
-
Catalanotto C, Pallotta M, ReFalo P, Sachs MS, Vayssie L, Macino G, Cogoni C (2004) Redundancy of the two dicer genes in transgene-induced posttranscriptional gene silencing in Neurospora crassa. Mol Cell Biol 24: 2536-2545
-
(2004)
Mol Cell Biol
, vol.24
, pp. 2536-2545
-
-
Catalanotto, C.1
Pallotta, M.2
ReFalo, P.3
Sachs, M.S.4
Vayssie, L.5
Macino, G.6
Cogoni, C.7
-
7
-
-
2442681764
-
Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step
-
Chapman EJ, Prokhnevsky AI, Gopinath K, Dolja VV, Carrington JC (2004) Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes Dev 18: 1179-1186
-
(2004)
Genes Dev
, vol.18
, pp. 1179-1186
-
-
Chapman, E.J.1
Prokhnevsky, A.I.2
Gopinath, K.3
Dolja, V.V.4
Carrington, J.C.5
-
8
-
-
22544440566
-
MicroRNA-binding viral protein interferes with Arabidopsis development
-
Chellappan P, Vanitharani R, Fauquet CM (2005) MicroRNA-binding viral protein interferes with Arabidopsis development. Proc Natl Acad Sci USA 102: 10381-10386
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 10381-10386
-
-
Chellappan, P.1
Vanitharani, R.2
Fauquet, C.M.3
-
9
-
-
2442604466
-
Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression
-
Chen J, Li WX, Xie D, Peng JR, Ding SW (2004) Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression. Plant Cell 16: 1302-1313
-
(2004)
Plant Cell
, vol.16
, pp. 1302-1313
-
-
Chen, J.1
Li, W.X.2
Xie, D.3
Peng, J.R.4
Ding, S.W.5
-
10
-
-
31044452870
-
Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways
-
Duchaine TF, Wohlschlegel JA, Kennedy S, Bei Y, Conte Jr D, Pang K, Brownell DR, Harding S, Mitani S, Ruvkun G, Yates JR, Mello CC (2006) Functional proteomics reveals the biochemical niche of C. elegans DCR-1 in multiple small-RNA-mediated pathways. Cell 124: 343-354
-
(2006)
Cell
, vol.124
, pp. 343-354
-
-
Duchaine, T.F.1
Wohlschlegel, J.A.2
Kennedy, S.3
Bei, Y.4
Conte Jr., D.5
Pang, K.6
Brownell, D.R.7
Harding, S.8
Mitani, S.9
Ruvkun, G.10
Yates, J.R.11
Mello, C.C.12
-
11
-
-
28444464041
-
DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal
-
Dunoyer P, Himber C, Voinnet O (2005) DICER-LIKE 4 is required for RNA interference and produces the 21-nucleotide small interfering RNA component of the plant cell-to-cell silencing signal. Nat Genet 37: 1356-1360
-
(2005)
Nat Genet
, vol.37
, pp. 1356-1360
-
-
Dunoyer, P.1
Himber, C.2
Voinnet, O.3
-
12
-
-
2442583436
-
Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing
-
Dunoyer P, Lecellier CH, Parizotto EA, Himber C, Voinnet O (2004) Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing. Plant Cell 16: 1235-1250
-
(2004)
Plant Cell
, vol.16
, pp. 1235-1250
-
-
Dunoyer, P.1
Lecellier, C.H.2
Parizotto, E.A.3
Himber, C.4
Voinnet, O.5
-
13
-
-
23944483216
-
Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs
-
Gasciolli V, Mallory AC, Bartel DP, Vaucheret H (2005) Partially redundant functions of Arabidopsis DICER-like enzymes and a role for DCL4 in producing trans-acting siRNAs. Curr Biol 15: 1494-1500
-
(2005)
Curr Biol
, vol.15
, pp. 1494-1500
-
-
Gasciolli, V.1
Mallory, A.C.2
Bartel, D.P.3
Vaucheret, H.4
-
14
-
-
13444256465
-
ASRP: The Arabidopsis Small RNA Project database
-
Gustafson AM, Allen E, Givan S, Smith D, Carrington JC, Kasschau KD (2005) ASRP: the Arabidopsis Small RNA Project database. Nucleic Acids Res 33: D637-D640
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Gustafson, A.M.1
Allen, E.2
Givan, S.3
Smith, D.4
Carrington, J.C.5
Kasschau, K.D.6
-
15
-
-
26944441255
-
Dicing and slicing: The core machinery of the RNA interference pathway
-
Hammond SM (2005) Dicing and slicing: the core machinery of the RNA interference pathway. FEBS Lett 579: 5822-5829
-
(2005)
FEBS Lett
, vol.579
, pp. 5822-5829
-
-
Hammond, S.M.1
-
16
-
-
0742323351
-
The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in micro-RNA-mediated gene regulation
-
Han MH, Goud S, Song L, Fedoroff N (2004) The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in micro-RNA-mediated gene regulation. Proc Natl Acad Sci USA 101: 1093-1098
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 1093-1098
-
-
Han, M.H.1
Goud, S.2
Song, L.3
Fedoroff, N.4
-
17
-
-
33745279055
-
Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning
-
Henderson IR, Zhang X, Lu C, Johnson L, Meyers BC, Green PJ, Jacobsen SE (2006) Dissecting Arabidopsis thaliana DICER function in small RNA processing, gene silencing and DNA methylation patterning. Nat Genet 38: 721-725
-
(2006)
Nat Genet
, vol.38
, pp. 721-725
-
-
Henderson, I.R.1
Zhang, X.2
Lu, C.3
Johnson, L.4
Meyers, B.C.5
Green, P.J.6
Jacobsen, S.E.7
-
18
-
-
20244378840
-
Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana
-
Hiraguri A, Itoh R, Kondo N, Nomura Y, Aizawa D, Murai Y, Koiwa H, Seki M, Shinozaki K, Fukuhara T (2005) Specific interactions between Dicer-like proteins and HYL1/DRB-family dsRNA-binding proteins in Arabidopsis thaliana. Plant Mol Biol 57: 173-188
-
(2005)
Plant Mol Biol
, vol.57
, pp. 173-188
-
-
Hiraguri, A.1
Itoh, R.2
Kondo, N.3
Nomura, Y.4
Aizawa, D.5
Murai, Y.6
Koiwa, H.7
Seki, M.8
Shinozaki, K.9
Fukuhara, T.10
-
19
-
-
0033385170
-
Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems
-
Jacobsen SE, Running MP, Meyerowitz EM (1999) Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. Development 126: 5231-5243
-
(1999)
Development
, vol.126
, pp. 5231-5243
-
-
Jacobsen, S.E.1
Running, M.P.2
Meyerowitz, E.M.3
-
21
-
-
22844447304
-
Atypical RNA polymerase subunits required for RNA-directed DNA methylation
-
Kanno T, Huettel B, Mette MF, Aufsatz W, Jaligot E, Daxinger L, Kreil DP, Matzke M, Matzke AJ (2005) Atypical RNA polymerase subunits required for RNA-directed DNA methylation. Nat Genet 37: 761-765
-
(2005)
Nat Genet
, vol.37
, pp. 761-765
-
-
Kanno, T.1
Huettel, B.2
Mette, M.F.3
Aufsatz, W.4
Jaligot, E.5
Daxinger, L.6
Kreil, D.P.7
Matzke, M.8
Matzke, A.J.9
-
23
-
-
4344637081
-
Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions
-
Kurihara Y, Watanabe Y (2004) Arabidopsis micro-RNA biogenesis through Dicer-like 1 protein functions. Proc Natl Acad Sci USA 101: 12753-12758
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 12753-12758
-
-
Kurihara, Y.1
Watanabe, Y.2
-
24
-
-
33645464445
-
Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans
-
Lee RC, Hammell CM, Ambros V. (2006) Interacting endogenous and exogenous RNAi pathways in Caenorhabditis elegans. RNA 12: 589-597
-
(2006)
RNA
, vol.12
, pp. 589-597
-
-
Lee, R.C.1
Hammell, C.M.2
Ambros, V.3
-
25
-
-
1842816517
-
Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways
-
Lee YS, Nakahara K, Pham JW, Kim K, He Z, Sontheimer EJ, Carthew RW (2004) Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways. Cell 117: 69-81
-
(2004)
Cell
, vol.117
, pp. 69-81
-
-
Lee, Y.S.1
Nakahara, K.2
Pham, J.W.3
Kim, K.4
He, Z.5
Sontheimer, E.J.6
Carthew, R.W.7
-
26
-
-
24644490196
-
Elucidation of the small RNA component of the transcriptome
-
Lu C, Tej SS, Luo S, Haudenschild CD, Meyers BC, Green PJ. (2005) Elucidation of the small RNA component of the transcriptome. Science 309: 1567-1569
-
(2005)
Science
, vol.309
, pp. 1567-1569
-
-
Lu, C.1
Tej, S.S.2
Luo, S.3
Haudenschild, C.D.4
Meyers, B.C.5
Green, P.J.6
-
27
-
-
24944444272
-
RNA silencing in productive virus infections
-
MacDiarmid R (2005) RNA silencing in productive virus infections. Annu Rev Phytopathol 43: 523-544
-
(2005)
Annu Rev Phytopathol
, vol.43
, pp. 523-544
-
-
MacDiarmid, R.1
-
28
-
-
0037069504
-
A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco
-
Mallory AC, Reinhart BJ, Bartel D, Vance VB, Bowman LH (2002) A viral suppressor of RNA silencing differentially regulates the accumulation of short interfering RNAs and micro-RNAs in tobacco. Proc Natl Acad Sci USA 99: 15228-15233
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 15228-15233
-
-
Mallory, A.C.1
Reinhart, B.J.2
Bartel, D.3
Vance, V.B.4
Bowman, L.H.5
-
29
-
-
33144489640
-
Ectopic DICER-LIKE1 expression in P1/HC-Pro Arabidopsis rescues phenotypic anomalies but not defects in microRNA and silencing pathways
-
Mlotshwa S, Schauer SE, Smith TH, Mallory AC, Herr Jr JM, Roth B, Merchant DS, Ray A, Bowman LH, Vance VB (2005) Ectopic DICER-LIKE1 expression in P1/HC-Pro Arabidopsis rescues phenotypic anomalies but not defects in microRNA and silencing pathways. Plant Cell 17: 2873-2885
-
(2005)
Plant Cell
, vol.17
, pp. 2873-2885
-
-
Mlotshwa, S.1
Schauer, S.E.2
Smith, T.H.3
Mallory, A.C.4
Herr Jr., J.M.5
Roth, B.6
Merchant, D.S.7
Ray, A.8
Bowman, L.H.9
Vance, V.B.10
-
30
-
-
0036009918
-
Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance
-
Morel JB, Godon C, Mourrain P, Béclin C, Boutet S, Feuerbach F, Proux F, Vaucheret H (2002) Fertile hypomorphic ARGONAUTE (ago1) mutants impaired in post-transcriptional gene silencing and virus resistance. Plant Cell 14: 629-639
-
(2002)
Plant Cell
, vol.14
, pp. 629-639
-
-
Morel, J.B.1
Godon, C.2
Mourrain, P.3
Béclin, C.4
Boutet, S.5
Feuerbach, F.6
Proux, F.7
Vaucheret, H.8
-
31
-
-
0034716907
-
Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance
-
Mourrain P, Béclin C, Elmayan T, Feuerbach F, Godon C, Morel JB, Jouette D, Lacombe AM, Nikic S, Picault N, Remoue K, Sanial M, Vo TA, Vaucheret H (2000) Arabidopsis SGS2 and SGS3 genes are required for posttranscriptional gene silencing and natural virus resistance. Cell 101: 533-542
-
(2000)
Cell
, vol.101
, pp. 533-542
-
-
Mourrain, P.1
Béclin, C.2
Elmayan, T.3
Feuerbach, F.4
Godon, C.5
Morel, J.B.6
Jouette, D.7
Lacombe, A.M.8
Nikic, S.9
Picault, N.10
Remoue, K.11
Sanial, M.12
Vo, T.A.13
Vaucheret, H.14
-
32
-
-
0037015239
-
CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in micro-RNA metabolism in Arabidopsis thaliana
-
Park W, Li J, Song R, Messing J, Chen X (2002) CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in micro-RNA metabolism in Arabidopsis thaliana. Curr Biol 12: 1484-1495
-
(2002)
Curr Biol
, vol.12
, pp. 1484-1495
-
-
Park, W.1
Li, J.2
Song, R.3
Messing, J.4
Chen, X.5
-
33
-
-
24344433177
-
Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis
-
Pontier D, Yahubyan G, Vega D, Bulski A, Saez-Vasquez J, Hakimi M.A, Lerbs-Mache S, Colot V, Lagrange T (2005) Reinforcement of silencing at transposons and highly repeated sequences requires the concerted action of two distinct RNA polymerases IV in Arabidopsis. Genes Dev 19: 2030-2040
-
(2005)
Genes Dev
, vol.19
, pp. 2030-2040
-
-
Pontier, D.1
Yahubyan, G.2
Vega, D.3
Bulski, A.4
Saez-Vasquez, J.5
Hakimi, M.A.6
Lerbs-Mache, S.7
Colot, V.8
Lagrange, T.9
-
34
-
-
0037213290
-
The coat protein of turnip crinkle virus suppresses posttranscriptional gene silencing at an early initiation step
-
Qu F, Ren T, Morris TJ (2003) The coat protein of turnip crinkle virus suppresses posttranscriptional gene silencing at an early initiation step. J Virol 77: 511-522
-
(2003)
J Virol
, vol.77
, pp. 511-522
-
-
Qu, F.1
Ren, T.2
Morris, T.J.3
-
35
-
-
0036645146
-
MicroRNAs in plants
-
Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP (2002) MicroRNAs in plants. Genes Dev 16: 1616-1626
-
(2002)
Genes Dev
, vol.16
, pp. 1616-1626
-
-
Reinhart, B.J.1
Weinstein, E.G.2
Rhoades, M.W.3
Bartel, B.4
Bartel, D.P.5
-
37
-
-
0037188904
-
The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans
-
Tabara H, Yigit E, Siomi H, Mello CC (2002) The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH-box helicase to direct RNAi in C. elegans. Cell 109: 861-871
-
(2002)
Cell
, vol.109
, pp. 861-871
-
-
Tabara, H.1
Yigit, E.2
Siomi, H.3
Mello, C.C.4
-
38
-
-
27144499282
-
A plant RNA virus suppresses RNA silencing through viral RNA replication
-
Takeda A, Tsukuda M, Mizumoto H, Okamoto K, Kaido M, Mise K, Okuno T (2005) A plant RNA virus suppresses RNA silencing through viral RNA replication. EMBO J 24: 3147-3157
-
(2005)
EMBO J
, vol.24
, pp. 3147-3157
-
-
Takeda, A.1
Tsukuda, M.2
Mizumoto, H.3
Okamoto, K.4
Kaido, M.5
Mise, K.6
Okuno, T.7
-
39
-
-
33645528966
-
Posttranscriptional small RNA pathways in plants: Mechanisms and regulations
-
Vaucheret H (2006a) Posttranscriptional small RNA pathways in plants: mechanisms and regulations. Genes Dev 20: 759-777
-
(2006)
Genes Dev
, vol.20
, pp. 759-777
-
-
Vaucheret, H.1
-
40
-
-
33645967150
-
AGO1 homeostasis requires co-expression of MIR168 and AGO1, posttranscriptional stabilization of miR168 by AGO1, and miR168-guided AGO1 cleavage
-
Vaucheret H, Mallory AC, Bartel DP (2006b) AGO1 homeostasis requires co-expression of MIR168 and AGO1, posttranscriptional stabilization of miR168 by AGO1, and miR168-guided AGO1 cleavage. Mol Cell 22: 129-136
-
(2006)
Mol Cell
, vol.22
, pp. 129-136
-
-
Vaucheret, H.1
Mallory, A.C.2
Bartel, D.P.3
-
41
-
-
1542350745
-
The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing
-
Vazquez F, Gasciolli V, Crété P, Vaucheret H (2004) The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing. Curr Biol 14: 346-351
-
(2004)
Curr Biol
, vol.14
, pp. 346-351
-
-
Vazquez, F.1
Gasciolli, V.2
Crété, P.3
Vaucheret, H.4
-
42
-
-
24644481318
-
DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana
-
Xie Z, Allen E, Wilken A, Carrington JC (2005) DICER-LIKE 4 functions in trans-acting small interfering RNA biogenesis and vegetative phase change in Arabidopsis thaliana. Proc Natl Acad Sci USA 102: 12984-12989
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 12984-12989
-
-
Xie, Z.1
Allen, E.2
Wilken, A.3
Carrington, J.C.4
-
43
-
-
19344374219
-
Genetic and functional diversification of small RNA pathways in plants
-
Xie Z, Johansen LK, Gustafson AM, Kasschau KD, Lellis AD, Zilberman D, Jacobsen SE, Carrington JC (2004) Genetic and functional diversification of small RNA pathways in plants. PLoS Biol 2: 642-652
-
(2004)
PLoS Biol
, vol.2
, pp. 642-652
-
-
Xie, Z.1
Johansen, L.K.2
Gustafson, A.M.3
Kasschau, K.D.4
Lellis, A.D.5
Zilberman, D.6
Jacobsen, S.E.7
Carrington, J.C.8
-
44
-
-
24944491201
-
A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis
-
Yoshikawa M, Peragine A, Park MY, Poethig RS (2005) A pathway for the biogenesis of trans-acting siRNAs in Arabidopsis. Genes Dev 19: 2164-2175
-
(2005)
Genes Dev
, vol.19
, pp. 2164-2175
-
-
Yoshikawa, M.1
Peragine, A.2
Park, M.Y.3
Poethig, R.S.4
|