Purification and characterization of YFGAP, a GAPDH-related novel antimicrobial peptide, from the skin of yellowfin tuna, Thunnus albacares

Fish and Shellfish Immunology

Volumn 33, Issue 4, 2012, Pages 743-752

  Seo, Jung Kil ^a   Lee, Min Jeong ^a   Go, Hye Jin ^a   Park, Tae Hyun ^b   Park, Nam Gyu ^a  

^a Pukyong National University   (South Korea)

^b West Vancouver Secondary School   (Canada)

Author keywords

Antimicrobial peptide; GAPDH; Innate immunity; Yellowfin tuna skin

Indexed keywords

AEROMONAS HYDROPHILA; ANIMALIA; BACILLUS SUBTILIS; ESCHERICHIA COLI; MICROCOCCUS LUTEUS; NEGIBACTERIA; POSIBACTERIA; SCOMBRIDAE; STREPTOCOCCUS INIAE; THUNNUS ALBACARES; VIBRIO PARAHAEMOLYTICUS;

EID: 84866745051     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2012.06.023     Document Type: Article

References (45)

1. Ullal A.J., Litaker R.W., Noga E.J. Antimicrobial peptides related from hemoglobin are expressed in epithelium of channel catfish. (Ictalurus punctatus, Rafinesque. Dev Comp Immunol 2008, 32:1301-1312.
2. Ellis A.E. Innate host defense mechanisms of fish against viruses and bacteria. Dev Comp Immunol 2001, 25:827-839.
3. Jenssen H., Hamill P., Hancock R.E.W. Peptide antimicrobial agents. Clin Microbiol Rev 2006, 19:491-511.
4. House R.V., Hastings K.L. Opinion in immunotoxicology: multidimensional mmunomodulation. J Immunotoxicol 2004, 1:123-129.
5. Bartlett T., Cuthbertson B.J., Shepard E., Chapman R., Gross P., Warr G. Crustins, homologues of an 11.5-kDa antibacterial peptide, from two species of penaeid shrimp, Litopenaeus vannamei and Litopenaeus setiferus. Mar Biotechnol 2002, 4:278-293.
6. Zasloff M. Antimicrobial peptides of multicellular organisms. Nature 2002, 415:389-395.
7. Tincu J.A., Taylor S.W. Antimicrobial peptides from marine invertebrates. Antimicrob Agents Chemother 2004, 48:3645-3654.
8. Oren Z., Shai Y. A class of highly potent antibacterial peptides related from pardaxin, a pore-forming peptide from the Moses sole fish Pardachirus marmoratus. Eur J Biochem 1996, 237:304-310.
9. Cole A.M., Weis P., Diamond G. Isolation and characterization of pleurocidin, an antimicrobial peptide in the skin secretions of winter flounder. J Biol Chem 1997, 272:12008-12013.
10. Silphaduang U., Noga E.J. Peptide antibiotics in mast cells of fish. Nature 2001, 414:268-269.
11. Park C.B., Lee J.H., Park I.Y., Kim M.S., Kim S.C. A novel antimicrobial peptide from the loach, Misgurnus anguillicaudatus. FEBS Lett 1997, 411:173-178.
12. Bao B., Peatman E., Li P., He C., Liu Z. Catfish hepcidin gene is expressed in a wide range of tissues and exhibits tissue-specific upregulation after bacterial infection. Dev Comp Immunol 2005, 29:939-950.
13. Subramanian S., Ross N.W., MacKinnon S.L. Myxinidin, a novel antimicrobial peptide from the epidermal mucus of hagfish, Myxine glutinosa L. Mar Biotechnol 2009, 11:748-757.
14. Rajanbabu V., Chen J.Y. Applications of antimicrobial peptide from fish and perspectives for the future. Peptides 2011, 32:415-420.
15. Klomklao S., Kishimura H., Nonami Y., Benjakul S. Biochemical properties of two isoforms of trypsin purified from the Intestine of skipjack tuna (Katsuwonus pelamis). Food Chem 2009, 115:155-162.
16. Ferraro V., Cruz I.B., Ferreira Jorge R., Malcata F.X., Pintado M.E., Castro P.M.L. Valorization of natural extracts from marine source focused on marine by-products: a review. Food Res Int 2010, 43:2221-2233.
17. Seo J.K., Go H.J., Moon H.S., Lee M.J., Hong Y.K., Jeong H.D., et al. Interaction of apidaecin Ib with phospholipid bilayers and its Edwardsiella species-specific antimicrobial activity. Bull Korean Chem Soc 2012, 33:1-8.
18. Wu Y., Wu M., He G., Zhang X., Li W., Gao Y., et al. Glyceraldehyde-3-phosphate dehydrogenase: a universal internal control for Western blots in prokaryotic and eukaryotic cells. Anal Biochem 2012, 423:15-22.
19. Tristan C., Shahani N., Sedlak T.W., Sawa A. The diverse functions of GAPDH: views from different subcellular compartments. Cellular Signal 2011, 23:317-323.
20. Meyer-Siegler K., Mauro D.J., Seal G., Wurzer J., deRiel J.K., Sirover M.A. A human nuclear uracil DNA glycosylase is the 37-kDa subunit of glyceraldehyde-3-phosphate dehydrogenase. Proc Natl Acad Sci USA 1991, 88:8460-8464.
21. Singh R., Green M.R. Sequence-specific binding of transfer RNA by glyceraldehyde-3-phosphate dehydrogenase. Science 1993, 259:365-368.
22. Glaser P.E., Gross R.W. Rapid plasmenylethanolamine-selective fusion of membrane bilayers catalyzed by an isoform of glyceraldehyde-3-phosphate dehydrogenase: discrimination between glycolytic and fusogenic roles of individual isoforms. Biochemistry (Mosc) 1995, 34:12193-12203.
23. Tisdale E.J. Glyceraldehyde-3-phosphate dehydrogenase is required for vesicular transport in the early secretory pathway. J Biol Chem 2001, 276:2480-2486.
24. Kumagai H., Sakai H. A porcine brain protein (35K protein) which bundles microtubules and its identification as glyceraldehyde 3-phosphate dehydrogenase. J Biochem 1983, 93:1259-1269.
25. Hara M.R., Agrawal N., Kim S.F., Cascio M.B., Fujimuro M., Ozeki Y., et al. S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding. Nat Cell Biol 2005, 7:665-674.
26. Ishitani R., Chuang D.M. Glyceraldehyde-3-phosphate dehydrogenase antisense oligodeoxynucleotides protect against cytosine arabinonucleoside-induced apoptosis in cultured cerebellar neurons. Proc Natl Acad Sci USA 1996, 93:9937-9941.
27. Ishitani R., Tanaka M., Sunaga K., Katsube N., Chuang D.M. Nuclear localization of overexpressed glyceraldehyde-3-phosphate dehydrogenase in cultured cerebellar neurons undergoing apoptosis. Mol Pharmacol 1998, 53:701-707.
28. Saunders P.A., Chalecka-Franaszek E., Chuang D.M. Subcellular distribution of glyceraldehyde-3-phosphate dehydrogenase in cerebellar granule cells undergoing cytosine arabinoside-induced apoptosis. J Neurochem 1997, 69:1820-1828.
29. Sawa A., Khan A.A., Hester L.D., Snyder S.H. Glyceraldehyde-3-phosphate dehydrogenase: nuclear translocation participates in neuronal and nonneuronal cell death. Proc Natl Acad Sci USA 1997, 94:11669-11674.
30. Seo J.K., Crawford J.M., Stone K.L., Noga E.J. Purification of a novel arthropod defensin from the American oyster, Crassostrea virginica. Biochem Biophys Res Commun 2005, 338:1998-2004.
31. Park N.G., Silphaduang U., Moon H.S., Seo J.K., Corrales J., Noga E.J. Structure-activity relationships of piscidin 4, a piscine antimicrobial peptide. Biochemistry 2011, 50:3288-3299.
32. Patrzykat A., Gallant J.W., Seo J.K., Pytyck J., Douglas S.E. Novel antimicrobial peptides related from flatfish genes. Antimicrob Agents Chemother 2003, 47:2464-2470.
33. Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The ClustalX windows interface: flexible strategies for multiple alignments aided by quality analysis tools. Nucl Acids Res 1997, 25:4876-4882.
34. Koo Y.S., Kim J.M., Park I.Y., Yu B.J., Jang S.A., Kim K.S., et al. Structure-activity relations of parasin I, a histone H2A-related antimicrobial peptide. Peptides 2008, 29:1102-1108.
35. Skerlavaj B., Romeo D., Gennaro R. Rapid membrane permeabilization and inhibition of vital functions of Gram-negative bacteria by bactenecins. Infect Immun 1990, 58:3724-3730.
36. Narvaez E., Berendsen J., Guzmán F., Gallardo J.A., Mercado L. An immunological method for quantifying antibacterial activity in Salmo salar (Linnaeus, 1758) skin mucus. Fish & Shellfish Immungy 2010, 28:235-239.
37. Shirakashi S., Andrews M., Kishimoto Y., Ishimaru K., Okada T., Sawada Y., et al. Oral treatment of praziquantel as an effective control measure against blood fluke infection in Pacific bluefin tuna (Thunnus orientalis). Aquaculture 2012, 326-329:15-19.
38. Munday B.L., Sawada Y., Cribb T., Hayward C.J. Diseases of tunas, Thunnus spp. J Fish Dis 2003, 26:187-206.
39. Rough KM, Lester RJG, Reuter RE. Caligus elongatus a significant parasite of cultured southern bluefin tuna Thunnus maccoyii. Book of Abstracts, World Aquaculture 99, Sydney, World Aquaculture Society, 26 April-2 May 1999, p. 655.
40. Buchanan J. Tuna research farm progress. In: Tuna-brief. Southern bluefin tuna aquaculture subprogram newsletter. 2002/03 Experimental program edition number 1. South Australian Research and Development Institute, Adelaide, South Australia.
41. Kim J.Y., Park S.C., Yoon M.Y., Hahm K.S., Park Y. C-terminal amidation of PMAP-23: translocation to the inner membrane of Gram-negative bacteria. Amino Acids 2011, 40:183-195.
42. Dennison S.R., Phoenix D.A. Influence of C-terminal amidation on the efficacy of modelin-5. Biochemistry 2011, 50:1514-1523.
43. Yeaman M.R., Yount N.Y. Mechanisms of antimicrobial peptide action and resistance. Pharmacol Rev 2003, 55:27-55.
44. Phadke S.M., Lazarevic V., Bahr C.C., Islam K., Stolz D.B., Watkins S., et al. Lentivirus lytic peptide-1 perturbs both outer and inner membranes of Serratia marcescens. Antimicrob Agents Chemother 2002, 46:2041-2045.
45. Fjell C.D., Hiss J.A., Hancock R.E., Schneider G. Designing antimicrobial peptides: form follows function. Nat Rev Drug Discov 2011, 11:37-51.