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Volumn 64, Issue 3, 2012, Pages 628-640

Methanogen Colonisation Does Not Significantly Alter Acetogen Diversity in Lambs Isolated 17 h After Birth and Raised Aseptically

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS); BOVIDAE; CLOSTRIDIACEAE; LACHNOSPIRACEAE; METHANOBREVIBACTER; METHANOBREVIBACTER SP.; OVIS ARIES;

EID: 84866740401     PISSN: 00953628     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00248-012-0024-z     Document Type: Article
Times cited : (33)

References (57)
  • 1
    • 0029670915 scopus 로고    scopus 로고
    • 2-utilizing acetogenic and sulfate-reducing bacteria and methanogenic Archaea from digestive tract of different mammals
    • 2-utilizing acetogenic and sulfate-reducing bacteria and methanogenic Archaea from digestive tract of different mammals. Curr Microbiol 32: 129-133.
    • (1996) Curr Microbiol , vol.32 , pp. 129-133
    • Morvan, B.1    Bonnemoy, F.2    Fonty, G.3    Gouet, P.4
  • 4
    • 0031013996 scopus 로고    scopus 로고
    • Effect of 2-bromoethansulfonic acid and Peptostreptococcus productus ATCC 35244 addition on stimulation of reductive acetogensis in the ruminal ecosystem by selective inhibition of methanogenesis
    • Nollet L, Demeyer D, Verstraete W (1997) Effect of 2-bromoethansulfonic acid and Peptostreptococcus productus ATCC 35244 addition on stimulation of reductive acetogensis in the ruminal ecosystem by selective inhibition of methanogenesis. Appl Environ Microbiol 63: 194-200.
    • (1997) Appl Environ Microbiol , vol.63 , pp. 194-200
    • Nollet, L.1    Demeyer, D.2    Verstraete, W.3
  • 5
    • 0032694712 scopus 로고    scopus 로고
    • Ruminal acetogens and their potential to lower ruminant methane emissions
    • Joblin KN (1999) Ruminal acetogens and their potential to lower ruminant methane emissions. Aust J Agric Res 50: 1307-1313.
    • (1999) Aust J Agric Res , vol.50 , pp. 1307-1313
    • Joblin, K.N.1
  • 6
    • 84866739499 scopus 로고    scopus 로고
    • Ruminal acetogens in dairy cows: dietary effects and quantification of E. limosum
    • Olsson K, Evans P, Joblin KN (2006) Ruminal acetogens in dairy cows: dietary effects and quantification of E. limosum. Reprod Nutr Devel 46(suppl 1): S109.
    • (2006) Reprod Nutr Devel , vol.46 , Issue.SUPPL. 1
    • Olsson, K.1    Evans, P.2    Joblin, K.N.3
  • 8
    • 0024636623 scopus 로고
    • Development of the cellulolytic microflora in the rumen of lambs transferred into sterile isolators a few days after birth
    • Fonty G, Gouet P, Nebout JM (1989) Development of the cellulolytic microflora in the rumen of lambs transferred into sterile isolators a few days after birth. Can J Microbiol 35: 416-422.
    • (1989) Can J Microbiol , vol.35 , pp. 416-422
    • Fonty, G.1    Gouet, P.2    Nebout, J.M.3
  • 9
    • 0031453129 scopus 로고    scopus 로고
    • Effect of Methanobrevibacter sp MF1 inoculation on glycoside hydrolase and polysaccharide depolymerase activities, wheat straw degradation and volatile fatty acid concentrations in the rumen of gnotobiotically-reared lambs
    • Fonty G, Williams AG, Bonnemoy F, Morvan B, Withers SE, Gouet P (1997) Effect of Methanobrevibacter sp MF1 inoculation on glycoside hydrolase and polysaccharide depolymerase activities, wheat straw degradation and volatile fatty acid concentrations in the rumen of gnotobiotically-reared lambs. Anaerobe 3: 383-389.
    • (1997) Anaerobe , vol.3 , pp. 383-389
    • Fonty, G.1    Williams, A.G.2    Bonnemoy, F.3    Morvan, B.4    Withers, S.E.5    Gouet, P.6
  • 10
    • 0035026397 scopus 로고    scopus 로고
    • Establishment of cellulolytic bacteria and development of fermentative activities in the rumen of gnotobiotically-reared lambs receiving the microbial additive Saccharomyces cerevisiae CNCM I-1077
    • Chaucheyras-Durand F, Fonty G (2001) Establishment of cellulolytic bacteria and development of fermentative activities in the rumen of gnotobiotically-reared lambs receiving the microbial additive Saccharomyces cerevisiae CNCM I-1077. Reprod Nutr Dev 41: 57-68.
    • (2001) Reprod Nutr Dev , vol.41 , pp. 57-68
    • Chaucheyras-Durand, F.1    Fonty, G.2
  • 11
    • 78650375397 scopus 로고    scopus 로고
    • Influence of the composition of the cellulolytic flora on the development of hydrogenotrophic microorganisms, hydrogen utilisation and methane production in the rumen of gnotobiotically-reared lambs
    • Chaucheyras-Durand F, Masseglia S, Fonty G, Forano E (2010) Influence of the composition of the cellulolytic flora on the development of hydrogenotrophic microorganisms, hydrogen utilisation and methane production in the rumen of gnotobiotically-reared lambs. Appl Environ Microbiol 76: 7931-7937.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 7931-7937
    • Chaucheyras-Durand, F.1    Masseglia, S.2    Fonty, G.3    Forano, E.4
  • 12
    • 0343819448 scopus 로고
    • Interactions between the rumen chytrid fungi and other microorganisms
    • D. O. Mountford and C. G. Orpin (Eds.), Inc, New York: Marcel Dekker
    • Williams AG, Joblin KN, Fonty G (1994) Interactions between the rumen chytrid fungi and other microorganisms. In: Mountford DO, Orpin CG (eds) Anaerobic Fungi: Biology, Ecology, and Function. Marcel Dekker, Inc, New York.
    • (1994) Anaerobic Fungi: Biology, Ecology, and Function
    • Williams, A.G.1    Joblin, K.N.2    Fonty, G.3
  • 13
    • 35448964802 scopus 로고    scopus 로고
    • Biological models of the rumen function
    • P. N. Hobson and C. S. Stewart (Eds.), London: Blackie Academic & Professional
    • Hobson PN, Fonty G (1997) Biological models of the rumen function. In: Hobson PN, Stewart CS (eds) The Rumen Microbial Ecosystem. Blackie Academic & Professional, London, pp 661-684.
    • (1997) The Rumen Microbial Ecosystem , pp. 661-684
    • Hobson, P.N.1    Fonty, G.2
  • 14
    • 0023229528 scopus 로고
    • Establishment of the microflora and anaerobic fungi in the rumen of lambs
    • Fonty G, Gouet P, Jouany J-P, Senaud J (1987) Establishment of the microflora and anaerobic fungi in the rumen of lambs. J Gen Microbiol 133: 1835-1843.
    • (1987) J Gen Microbiol , vol.133 , pp. 1835-1843
    • Fonty, G.1    Gouet, P.2    Jouany, J.-P.3    Senaud, J.4
  • 15
    • 0020692550 scopus 로고
    • Ecological factors determining establishment of cellulolytic bacteria and protozoa in the rumens of meroxenic lambs
    • Fonty G, Gouet P, Jouany JP, Senaud J (1983) Ecological factors determining establishment of cellulolytic bacteria and protozoa in the rumens of meroxenic lambs. J Gen Microbiol 129: 213-223.
    • (1983) J Gen Microbiol , vol.129 , pp. 213-223
    • Fonty, G.1    Gouet, P.2    Jouany, J.P.3    Senaud, J.4
  • 16
    • 62349131091 scopus 로고    scopus 로고
    • Development of a RT-qPCR method for the quantification of Fibrobacter succinogenes S85 glycoside hydrolase transcripts in the rumen content of gnotobiotic and conventional sheep
    • Bera-Maillet C, Mosoni P, Kwasiborski A, Suau F, Ribot Y, Forano E (2009) Development of a RT-qPCR method for the quantification of Fibrobacter succinogenes S85 glycoside hydrolase transcripts in the rumen content of gnotobiotic and conventional sheep. J Microbiol Methods 77: 8-16.
    • (2009) J Microbiol Methods , vol.77 , pp. 8-16
    • Bera-Maillet, C.1    Mosoni, P.2    Kwasiborski, A.3    Suau, F.4    Ribot, Y.5    Forano, E.6
  • 17
    • 0028165830 scopus 로고
    • Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens
    • Raskin L, Stromley JM, Rittmann BE, Stahl DA (1994) Group-specific 16S rRNA hybridization probes to describe natural communities of methanogens. Appl Environ Microbiol 60: 1232-1240.
    • (1994) Appl Environ Microbiol , vol.60 , pp. 1232-1240
    • Raskin, L.1    Stromley, J.M.2    Rittmann, B.E.3    Stahl, D.A.4
  • 19
    • 4444346058 scopus 로고    scopus 로고
    • Protozoa involved in butyric rather than lactic fermentative pattern during latent acidosis in sheep
    • Brossard L, Martin C, Chaucheyras-Durand F, Michalet-Doreau B (2004) Protozoa involved in butyric rather than lactic fermentative pattern during latent acidosis in sheep. Reprod Nutr Dev 44: 195-206.
    • (2004) Reprod Nutr Dev , vol.44 , pp. 195-206
    • Brossard, L.1    Martin, C.2    Chaucheyras-Durand, F.3    Michalet-Doreau, B.4
  • 20
    • 0000879885 scopus 로고
    • The cellulolytic activity of pure strains of bacteria from the rumen of cattle
    • Halliwell G, Bryant MP (1963) The cellulolytic activity of pure strains of bacteria from the rumen of cattle. J Gen Microbiol 32: 441-448.
    • (1963) J Gen Microbiol , vol.32 , pp. 441-448
    • Halliwell, G.1    Bryant, M.P.2
  • 21
    • 0024569475 scopus 로고
    • Enrichment and isolation of Acetitomaculum ruminis, gen. nov., sp. nov.: acetogenic bacteria from the bovine rumen
    • Greening RC, Leedle JAZ (1989) Enrichment and isolation of Acetitomaculum ruminis, gen. nov., sp. nov.: acetogenic bacteria from the bovine rumen. Arch Microbiol 151: 399-406.
    • (1989) Arch Microbiol , vol.151 , pp. 399-406
    • Greening, R.C.1    Leedle, J.A.Z.2
  • 23
    • 0020967449 scopus 로고
    • A simple and versatile micro-computer program for the determination of 'most probable number
    • Clarke KR, Owens NJP (1983) A simple and versatile micro-computer program for the determination of 'most probable number'. J Microbiol Meth 1: 133-137.
    • (1983) J Microbiol Meth , vol.1 , pp. 133-137
    • Clarke, K.R.1    Owens, N.J.P.2
  • 24
    • 0032820219 scopus 로고    scopus 로고
    • Rumen characteristics, methane emissions and digestion in weaned lambs reared in isolation
    • Faichney GJ, Graham NM, Walker DM (1999) Rumen characteristics, methane emissions and digestion in weaned lambs reared in isolation. Aust J Agric Res 50: 1083-1089.
    • (1999) Aust J Agric Res , vol.50 , pp. 1083-1089
    • Faichney, G.J.1    Graham, N.M.2    Walker, D.M.3
  • 25
    • 0002719807 scopus 로고
    • Methanogenesis, an integrated part of carbohydrate fermentation and its control
    • I. W. McDonald and A. C. I. Warner (Eds.), Armidale, Australia: The University of New England Publishing Unit
    • Demeyer DI, van Nevel CJ (1975) Methanogenesis, an integrated part of carbohydrate fermentation and its control. In: McDonald IW, Warner ACI (eds) Digestion and metabolism in the ruminant. The University of New England Publishing Unit, Armidale, Australia.
    • (1975) Digestion and Metabolism in the Ruminant
    • Demeyer, D.I.1    van Nevel, C.J.2
  • 26
    • 2442510059 scopus 로고    scopus 로고
    • Improved extraction of PCR-quality community DNA from digest and fecal samples
    • Yu Z, Morrison M (2004) Improved extraction of PCR-quality community DNA from digest and fecal samples. Biotechniques 36: 808-812.
    • (2004) Biotechniques , vol.36 , pp. 808-812
    • Yu, Z.1    Morrison, M.2
  • 27
    • 79959519358 scopus 로고    scopus 로고
    • Long-term defaunation increases the abundance of cellulolytic ruminococci and methanogens but does not affect the bacterial and methanogen diversity in the rumen of sheep
    • Mosoni P, Martin C, Forano E, Morgavi DP (2011) Long-term defaunation increases the abundance of cellulolytic ruminococci and methanogens but does not affect the bacterial and methanogen diversity in the rumen of sheep. J Anim Sci 89: 783-791.
    • (2011) J Anim Sci , vol.89 , pp. 783-791
    • Mosoni, P.1    Martin, C.2    Forano, E.3    Morgavi, D.P.4
  • 29
    • 34547169420 scopus 로고    scopus 로고
    • Postinoculation protozoan establishment and association patterns of methanogenic archaea in the ovine rumen
    • Ohene-Adjei S, Teather RM, Ivan M, Forster RJ (2007) Postinoculation protozoan establishment and association patterns of methanogenic archaea in the ovine rumen. Appl Environ Microb 73: 4609-4618.
    • (2007) Appl Environ Microb , vol.73 , pp. 4609-4618
    • Ohene-Adjei, S.1    Teather, R.M.2    Ivan, M.3    Forster, R.J.4
  • 30
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow (Eds.), London: Wiley
    • Lane DJ (1991) 16S/23S rRNA sequencing. In: Stackebrandt E, Goodfellow M (eds) Nucleic Acid Techniques in Bacterial Systematics. Wiley, London.
    • (1991) Nucleic Acid Techniques in Bacterial Systematics
    • Lane, D.J.1
  • 31
    • 0037251969 scopus 로고    scopus 로고
    • The Ribosomal Database Project (RDP-II) previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy
    • Cole JR, Chai B, Marsh TL et al (2003) The Ribosomal Database Project (RDP-II) previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy. Nucl Acids Res 31: 442-443.
    • (2003) Nucl Acids Res , vol.31 , pp. 442-443
    • Cole, J.R.1    Chai, B.2    Marsh, T.L.3
  • 32
    • 33746061683 scopus 로고    scopus 로고
    • Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
    • DeSantis TZ, Hugenholtz P, Larsen N et al (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72: 5069-5072.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 5069-5072
    • DeSantis, T.Z.1    Hugenholtz, P.2    Larsen, N.3
  • 33
    • 72949107142 scopus 로고    scopus 로고
    • Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
    • Schloss PD, Westcott SL, Ryabin T et al (2009) Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75: 7537-7541.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 7537-7541
    • Schloss, P.D.1    Westcott, S.L.2    Ryabin, T.3
  • 34
    • 0028028182 scopus 로고
    • Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt E, Goebel BM (1994) Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44: 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 35
    • 0035286628 scopus 로고    scopus 로고
    • Recovery and analysis of formyltetrahydrofolate synthetase gene sequences from natural populations of acetogenic bacteria
    • Leaphart AB, Lovell CR (2001) Recovery and analysis of formyltetrahydrofolate synthetase gene sequences from natural populations of acetogenic bacteria. Appl Environ Microbiol 67: 1392-1395.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1392-1395
    • Leaphart, A.B.1    Lovell, C.R.2
  • 36
    • 2542523843 scopus 로고    scopus 로고
    • ARB: a software environment for sequence data
    • Ludwig W, Strunk O, Westram R et al (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32: 1363-1371.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1363-1371
    • Ludwig, W.1    Strunk, O.2    Westram, R.3
  • 38
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A (2006) RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 39
    • 77950226313 scopus 로고    scopus 로고
    • Presence of novel, potentially homoacetogenic bacteria in the rumen as determined by analysis of formyltetrahydrofolate synthetase sequences from ruminants
    • Henderson G, Naylor GE, Leahy SC, Janssen PH (2010) Presence of novel, potentially homoacetogenic bacteria in the rumen as determined by analysis of formyltetrahydrofolate synthetase sequences from ruminants. Appl Environ Microbiol 76: 2058-2066.
    • (2010) Appl Environ Microbiol , vol.76 , pp. 2058-2066
    • Henderson, G.1    Naylor, G.E.2    Leahy, S.C.3    Janssen, P.H.4
  • 40
    • 0036856362 scopus 로고    scopus 로고
    • The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill
    • Luton PE, Wayne JM, Sharp RJ, Riley PW (2002) The mcrA gene as an alternative to 16S rRNA in the phylogenetic analysis of methanogen populations in landfill. Microbiology 148: 3521-3530.
    • (2002) Microbiology , vol.148 , pp. 3521-3530
    • Luton, P.E.1    Wayne, J.M.2    Sharp, R.J.3    Riley, P.W.4
  • 44
    • 4544357886 scopus 로고    scopus 로고
    • 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs
    • Skillman LC, Evans PN, Naylor GE, Morvan B, Jarvis GN, Joblin KN (2004) 16S ribosomal DNA-directed PCR primers for ruminal methanogens and identification of methanogens colonising young lambs. Anaerobe 10: 277-285.
    • (2004) Anaerobe , vol.10 , pp. 277-285
    • Skillman, L.C.1    Evans, P.N.2    Naylor, G.E.3    Morvan, B.4    Jarvis, G.N.5    Joblin, K.N.6
  • 45
    • 45749140542 scopus 로고    scopus 로고
    • Structure of the Archaeal community of the rumen
    • Janssen PH, Kirs M (2008) Structure of the Archaeal community of the rumen. Appl Environ Microbiol 74: 3619-3625.
    • (2008) Appl Environ Microbiol , vol.74 , pp. 3619-3625
    • Janssen, P.H.1    Kirs, M.2
  • 46
    • 78649293630 scopus 로고    scopus 로고
    • Host specificity of the ruminal bacterial comunity in the dairy cow following near-total exchange of ruminal contents
    • Weimer PJ, Stevenson DM, Mantovani HC, Man SLC (2010) Host specificity of the ruminal bacterial comunity in the dairy cow following near-total exchange of ruminal contents. J Dairy Sci 93: 5902-5912.
    • (2010) J Dairy Sci , vol.93 , pp. 5902-5912
    • Weimer, P.J.1    Stevenson, D.M.2    Mantovani, H.C.3    Man, S.L.C.4
  • 48
    • 77952497488 scopus 로고    scopus 로고
    • Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets
    • Pitta DW, Pinchak WE, Dowd SE et al (2010) Rumen bacterial diversity dynamics associated with changing from bermudagrass hay to grazed winter wheat diets. Microb Ecol 59: 511-522.
    • (2010) Microb Ecol , vol.59 , pp. 511-522
    • Pitta, D.W.1    Pinchak, W.E.2    Dowd, S.E.3
  • 49
    • 79952337786 scopus 로고    scopus 로고
    • Status of the phylogenetic diversity census of ruminal microbiomes
    • Kim M, Morrison M, Zhongtang Y (2011) Status of the phylogenetic diversity census of ruminal microbiomes. FEMS Microbiol Ecol 76: 49-63.
    • (2011) FEMS Microbiol Ecol , vol.76 , pp. 49-63
    • Kim, M.1    Morrison, M.2    Zhongtang, Y.3
  • 52
    • 0002973531 scopus 로고
    • Acetogenesis from carbon dioxide in termite guts
    • H. L. Drake (Ed.), New York: Chapman & Hall
    • Breznak JA (1994) Acetogenesis from carbon dioxide in termite guts. In: Drake HL (ed) Acetogenesis. Chapman & Hall, New York, pp 303-330.
    • (1994) Acetogenesis , pp. 303-330
    • Breznak, J.A.1
  • 53
    • 0025880415 scopus 로고
    • Mixotrophy in the termite gut acetogen, Sporomusa termitida
    • Breznak JA, Blum JS (1991) Mixotrophy in the termite gut acetogen, Sporomusa termitida. Arch Microbiol 156: 105-110.
    • (1991) Arch Microbiol , vol.156 , pp. 105-110
    • Breznak, J.A.1    Blum, J.S.2
  • 54
    • 70350234638 scopus 로고    scopus 로고
    • Real-time PCR assays targeting formyltetrahydrofolate synthetase gene to enumerate acetogens in natural and engineered environments
    • Xu K, Liu H, Du G, Chen J (2009) Real-time PCR assays targeting formyltetrahydrofolate synthetase gene to enumerate acetogens in natural and engineered environments. Anaerobe 15: 204-213.
    • (2009) Anaerobe , vol.15 , pp. 204-213
    • Xu, K.1    Liu, H.2    Du, G.3    Chen, J.4
  • 55
    • 58149083157 scopus 로고    scopus 로고
    • Diversity of the formyltetrahydrofolate synthetase gene (fhs) a key enzyme for reductive acetogenesis, in the bovine rumen
    • Matsui H, Kojima N, Tajima K (2008) Diversity of the formyltetrahydrofolate synthetase gene (fhs) a key enzyme for reductive acetogenesis, in the bovine rumen. Biosci Biotechnol Biochem 72: 3273-3276.
    • (2008) Biosci Biotechnol Biochem , vol.72 , pp. 3273-3276
    • Matsui, H.1    Kojima, N.2    Tajima, K.3
  • 56
    • 0001422189 scopus 로고
    • The capacity of hydrogenotrophic anaerobic bacteria to compete for traces of hydrogen depends on the redox potential of the terminal electron acceptor
    • Cord-Ruwisch R, Seitz H, Conrad R (1988) The capacity of hydrogenotrophic anaerobic bacteria to compete for traces of hydrogen depends on the redox potential of the terminal electron acceptor. Arch Microbiol 149: 350-357.
    • (1988) Arch Microbiol , vol.149 , pp. 350-357
    • Cord-Ruwisch, R.1    Seitz, H.2    Conrad, R.3


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