메뉴 건너뛰기




Volumn 586, Issue 19, 2012, Pages 3134-3141

Genome-wide biochemical analysis of Arabidopsis protein phosphatase using a wheat cell-free system

Author keywords

Arabidopsis; Dephosphorylation; Enzyme activity; Protein phosphatase; Wheat cell free protein synthesis system

Indexed keywords

COMPLEMENTARY DNA; DUAL SPECIFICITY PHOSPHATASE; PHOSPHOPROTEIN PHOSPHATASE; PROTEIN TYROSINE PHOSPHATASE; RECOMBINANT ENZYME; SERINE THREONINE PROTEIN PHOSPHATASE; UNCLASSIFIED DRUG;

EID: 84866601489     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2012.08.014     Document Type: Article
Times cited : (9)

References (51)
  • 1
    • 0034383949 scopus 로고    scopus 로고
    • The regulation of protein function by multisite phosphorylation-A 25 year update
    • P. Cohen The regulation of protein function by multisite phosphorylation-a 25 year update Trends Biochem. Sci. 25 2000 596 601
    • (2000) Trends Biochem. Sci. , vol.25 , pp. 596-601
    • Cohen, P.1
  • 2
    • 66849128774 scopus 로고    scopus 로고
    • Protein phosphorylation: What does the future hold?
    • E. Keinan, I. Schechter, M. Sela, Wiley Hoboken, NJ
    • T. Hunter Protein phosphorylation: what does the future hold? E. Keinan, I. Schechter, M. Sela, Life Sciences for the 21st Century 2004 Wiley Hoboken, NJ 191 223
    • (2004) Life Sciences for the 21st Century , pp. 191-223
    • Hunter, T.1
  • 3
    • 0029129557 scopus 로고
    • Serine/threonine protein phosphatases
    • S. Wera, and B.A. Hemmings Serine/threonine protein phosphatases Biochem. J. 311 Pt 1 1995 17 29
    • (1995) Biochem. J. , vol.311 , Issue.PART 1 , pp. 17-29
    • Wera, S.1    Hemmings, B.A.2
  • 4
    • 0031860103 scopus 로고    scopus 로고
    • The structure and mechanism of protein phosphatases: Insights into catalysis and regulation
    • D. Barford, A.K. Das, and M.P. Egloff The structure and mechanism of protein phosphatases: insights into catalysis and regulation Annu. Rev. Biophys. Biomol. Struct. 27 1998 133 164
    • (1998) Annu. Rev. Biophys. Biomol. Struct. , vol.27 , pp. 133-164
    • Barford, D.1    Das, A.K.2    Egloff, M.P.3
  • 5
    • 0027970874 scopus 로고
    • Protein-tyrosine phosphatases
    • R.L. Stone, and J.E. Dixon Protein-tyrosine phosphatases J. Biol. Chem. 269 1994 31323 31326
    • (1994) J. Biol. Chem. , vol.269 , pp. 31323-31326
    • Stone, R.L.1    Dixon, J.E.2
  • 6
    • 0035983678 scopus 로고    scopus 로고
    • The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis
    • D. Kerk, J. Bulgrien, D.W. Smith, B. Barsam, S. Veretnik, and M. Gribskov The complement of protein phosphatase catalytic subunits encoded in the genome of Arabidopsis Plant Physiol. 129 2002 908 925
    • (2002) Plant Physiol. , vol.129 , pp. 908-925
    • Kerk, D.1    Bulgrien, J.2    Smith, D.W.3    Barsam, B.4    Veretnik, S.5    Gribskov, M.6
  • 7
    • 0034693799 scopus 로고    scopus 로고
    • The protein tyrosine kinase family of the human genome
    • D.R. Robinson, Y.M. Wu, and S.F. Lin The protein tyrosine kinase family of the human genome Oncogene 19 2000 5548 5557
    • (2000) Oncogene , vol.19 , pp. 5548-5557
    • Robinson, D.R.1    Wu, Y.M.2    Lin, S.F.3
  • 8
    • 2942581416 scopus 로고    scopus 로고
    • Protein tyrosine phosphatases in the human genome
    • A. Alonso Protein tyrosine phosphatases in the human genome Cell 117 2004 699 711
    • (2004) Cell , vol.117 , pp. 699-711
    • Alonso, A.1
  • 9
    • 0030953448 scopus 로고    scopus 로고
    • Protein tyrosine phosphatases in signal transduction
    • B.G. Neel, and N.K. Tonks Protein tyrosine phosphatases in signal transduction Curr. Opin. Cell Biol. 9 1997 193 204
    • (1997) Curr. Opin. Cell Biol. , vol.9 , pp. 193-204
    • Neel, B.G.1    Tonks, N.K.2
  • 10
    • 2442602365 scopus 로고    scopus 로고
    • Plant PP2C phosphatases: Emerging functions in stress signaling
    • A. Schweighofer, H. Hirt, and I. Meskiene Plant PP2C phosphatases: emerging functions in stress signaling Trends Plant Sci. 9 2004 236 243
    • (2004) Trends Plant Sci. , vol.9 , pp. 236-243
    • Schweighofer, A.1    Hirt, H.2    Meskiene, I.3
  • 11
    • 0142057022 scopus 로고    scopus 로고
    • Protein phosphatases in plants
    • S. Luan Protein phosphatases in plants Annu. Rev. Plant Biol. 54 2003 63 92
    • (2003) Annu. Rev. Plant Biol. , vol.54 , pp. 63-92
    • Luan, S.1
  • 12
    • 33747886506 scopus 로고    scopus 로고
    • Switching the flip: Protein phosphatase roles in signaling pathways
    • A. DeLong Switching the flip: protein phosphatase roles in signaling pathways Curr. Opin. Plant Biol. 9 2006 470 477
    • (2006) Curr. Opin. Plant Biol. , vol.9 , pp. 470-477
    • Delong, A.1
  • 14
    • 65349109163 scopus 로고    scopus 로고
    • A simple and high-sensitivity method for analysis of ubiquitination and polyubiquitination based on wheat cell-free protein synthesis
    • H. Takahashi, A. Nozawa, M. Seki, K. Shinozaki, Y. Endo, and T. Sawasaki A simple and high-sensitivity method for analysis of ubiquitination and polyubiquitination based on wheat cell-free protein synthesis BMC Plant Biol. 9 2009 39
    • (2009) BMC Plant Biol. , vol.9 , pp. 39
    • Takahashi, H.1    Nozawa, A.2    Seki, M.3    Shinozaki, K.4    Endo, Y.5    Sawasaki, T.6
  • 15
    • 68649094954 scopus 로고    scopus 로고
    • Construction of a protein library of Arabidopsis transcription factors using a wheat cell-free protein production system and its application for DNA binding analysis
    • A. Nozawa Construction of a protein library of Arabidopsis transcription factors using a wheat cell-free protein production system and its application for DNA binding analysis Biosci. Biotechnol. Biochem. 73 2009 1661 1664
    • (2009) Biosci. Biotechnol. Biochem. , vol.73 , pp. 1661-1664
    • Nozawa, A.1
  • 16
    • 77955475926 scopus 로고    scopus 로고
    • Regulation of Arabidopsis defense responses against Spodoptera littoralis by CPK-mediated calcium signaling
    • C.N. Kanchiswamy Regulation of Arabidopsis defense responses against Spodoptera littoralis by CPK-mediated calcium signaling BMC Plant Biol. 10 2010 97
    • (2010) BMC Plant Biol. , vol.10 , pp. 97
    • Kanchiswamy, C.N.1
  • 18
    • 57049126143 scopus 로고    scopus 로고
    • Human protein factory for converting the transcriptome into an in vitro-expressed proteome
    • N. Goshima Human protein factory for converting the transcriptome into an in vitro-expressed proteome Nat. Methods 5 2008 1011 1017
    • (2008) Nat. Methods , vol.5 , pp. 1011-1017
    • Goshima, N.1
  • 19
    • 20244377471 scopus 로고    scopus 로고
    • Functional annotation of a full-length Arabidopsis cDNA collection
    • M. Seki Functional annotation of a full-length Arabidopsis cDNA collection Science 296 2002 141 145
    • (2002) Science , vol.296 , pp. 141-145
    • Seki, M.1
  • 20
    • 3242767781 scopus 로고    scopus 로고
    • Genome-scale, biochemical annotation method based on the wheat germ cell-free protein synthesis system
    • T. Sawasaki, Y. Hasegawa, R. Morishita, M. Seki, K. Shinozaki, and Y. Endo Genome-scale, biochemical annotation method based on the wheat germ cell-free protein synthesis system Phytochemistry 65 2004 1549 1555
    • (2004) Phytochemistry , vol.65 , pp. 1549-1555
    • Sawasaki, T.1    Hasegawa, Y.2    Morishita, R.3    Seki, M.4    Shinozaki, K.5    Endo, Y.6
  • 21
    • 33644810868 scopus 로고    scopus 로고
    • The wheat germ cell-free expression system: Methods for high-throughput materialization of genetic information
    • T. Sawasaki, M.D. Gouda, T. Kawasaki, T. Tsuboi, Y. Tozawa, K. Takai, and Y. Endo The wheat germ cell-free expression system: methods for high-throughput materialization of genetic information Methods Mol. Biol. 310 2005 131 144
    • (2005) Methods Mol. Biol. , vol.310 , pp. 131-144
    • Sawasaki, T.1    Gouda, M.D.2    Kawasaki, T.3    Tsuboi, T.4    Tozawa, Y.5    Takai, K.6    Endo, Y.7
  • 23
    • 0032076827 scopus 로고    scopus 로고
    • Molecular characterization of a tyrosine-specific protein phosphatase encoded by a stress-responsive gene in Arabidopsis
    • Q. Xu, H.H. Fu, R. Gupta, and S. Luan Molecular characterization of a tyrosine-specific protein phosphatase encoded by a stress-responsive gene in Arabidopsis Plant Cell 10 1998 849 857
    • (1998) Plant Cell , vol.10 , pp. 849-857
    • Xu, Q.1    Fu, H.H.2    Gupta, R.3    Luan, S.4
  • 24
    • 0034005034 scopus 로고    scopus 로고
    • ATMPK4, an Arabidopsis homolog of mitogen-activated protein kinase, is activated in vitro by AtMEK1 through threonine phosphorylation
    • Y. Huang, H. Li, R. Gupta, P.C. Morris, S. Luan, and J.J. Kieber ATMPK4, an Arabidopsis homolog of mitogen-activated protein kinase, is activated in vitro by AtMEK1 through threonine phosphorylation Plant Physiol. 122 2000 1301 1310
    • (2000) Plant Physiol. , vol.122 , pp. 1301-1310
    • Huang, Y.1    Li, H.2    Gupta, R.3    Morris, P.C.4    Luan, S.5    Kieber, J.J.6
  • 25
    • 0030930384 scopus 로고    scopus 로고
    • A possible role for kinase-associated protein phosphatase in the Arabidopsis CLAVATA1 signaling pathway
    • R.W. Williams, J.M. Wilson, and E.M. Meyerowitz A possible role for kinase-associated protein phosphatase in the Arabidopsis CLAVATA1 signaling pathway Proc. Natl. Acad. Sci. U S A 94 1997 10467 10472
    • (1997) Proc. Natl. Acad. Sci. U S A , vol.94 , pp. 10467-10472
    • Williams, R.W.1    Wilson, J.M.2    Meyerowitz, E.M.3
  • 26
    • 0036644983 scopus 로고    scopus 로고
    • The Arabidopsis kinase-associated protein phosphatase controls internalization of the somatic embryogenesis receptor kinase 1
    • K. Shah, E. Russinova, T.W. Gadella Jr.; J. Willemse, and S.C. De Vries The Arabidopsis kinase-associated protein phosphatase controls internalization of the somatic embryogenesis receptor kinase 1 Genes Dev. 16 2002 1707 1720
    • (2002) Genes Dev. , vol.16 , pp. 1707-1720
    • Shah, K.1    Russinova, E.2    Gadella Jr., T.W.3    Willemse, J.4    De Vries, S.C.5
  • 27
    • 0037314247 scopus 로고    scopus 로고
    • POLTERGEIST encodes a protein phosphatase 2C that regulates CLAVATA pathways controlling stem cell identity at Arabidopsis shoot and flower meristems
    • L.P. Yu, A.K. Miller, and S.E. Clark POLTERGEIST encodes a protein phosphatase 2C that regulates CLAVATA pathways controlling stem cell identity at Arabidopsis shoot and flower meristems Curr. Biol. 13 2003 179 188
    • (2003) Curr. Biol. , vol.13 , pp. 179-188
    • Yu, L.P.1    Miller, A.K.2    Clark, S.E.3
  • 28
    • 34547559799 scopus 로고    scopus 로고
    • The phosphatase laforin crosses evolutionary boundaries and links carbohydrate metabolism to neuronal disease
    • 3rd
    • M.S. Gentry, R.H. Dowen 3rd, C.A. Worby, S. Mattoo, J.R. Ecker, and J.E. Dixon The phosphatase laforin crosses evolutionary boundaries and links carbohydrate metabolism to neuronal disease J. Cell Biol. 178 2007 477 488
    • (2007) J. Cell Biol. , vol.178 , pp. 477-488
    • Gentry, M.S.1    Dowen, R.H.2    Worby, C.A.3    Mattoo, S.4    Ecker, J.R.5    Dixon, J.E.6
  • 29
    • 34548355081 scopus 로고    scopus 로고
    • Arabidopsis MAPK phosphatase 2 (MKP2) positively regulates oxidative stress tolerance and inactivates the MPK3 and MPK6 MAPKs
    • J.S. Lee, and B.E. Ellis Arabidopsis MAPK phosphatase 2 (MKP2) positively regulates oxidative stress tolerance and inactivates the MPK3 and MPK6 MAPKs J. Biol. Chem. 282 2007 25020 25029
    • (2007) J. Biol. Chem. , vol.282 , pp. 25020-25029
    • Lee, J.S.1    Ellis, B.E.2
  • 30
    • 77953189923 scopus 로고    scopus 로고
    • The Arabidopsis stem cell factor POLTERGEIST is membrane localized and phospholipid stimulated
    • J.M. Gagne, and S.E. Clark The Arabidopsis stem cell factor POLTERGEIST is membrane localized and phospholipid stimulated Plant Cell 22 2010 729 743
    • (2010) Plant Cell , vol.22 , pp. 729-743
    • Gagne, J.M.1    Clark, S.E.2
  • 31
    • 82255192718 scopus 로고    scopus 로고
    • Identification of an important site for function of the type 2C protein phosphatase ABI2 in abscisic acid signalling in Arabidopsis
    • H.L. Sun Identification of an important site for function of the type 2C protein phosphatase ABI2 in abscisic acid signalling in Arabidopsis J. Exp. Bot. 62 2011 5713 5725
    • (2011) J. Exp. Bot. , vol.62 , pp. 5713-5725
    • Sun, H.L.1
  • 32
    • 80054733904 scopus 로고    scopus 로고
    • Substrate analysis of Arabidopsis PP2C-type protein phosphatases
    • J. Umbrasaite, A. Schweighofer, and I. Meskiene Substrate analysis of Arabidopsis PP2C-type protein phosphatases Methods Mol. Biol. 779 2011 149 161
    • (2011) Methods Mol. Biol. , vol.779 , pp. 149-161
    • Umbrasaite, J.1    Schweighofer, A.2    Meskiene, I.3
  • 33
    • 79957517860 scopus 로고    scopus 로고
    • Phylogenetic and genetic linkage between novel atypical dual-specificity phosphatases from non-metazoan organisms
    • C. Roma-Mateo Phylogenetic and genetic linkage between novel atypical dual-specificity phosphatases from non-metazoan organisms Mol. Genet. Genomics 285 2011 341 354
    • (2011) Mol. Genet. Genomics , vol.285 , pp. 341-354
    • Roma-Mateo, C.1
  • 34
    • 79958076387 scopus 로고    scopus 로고
    • The molecular basis of ABA-independent inhibition of PP2Cs by a subclass of PYL proteins
    • Q. Hao The molecular basis of ABA-independent inhibition of PP2Cs by a subclass of PYL proteins Mol. Cell 42 2011 662 672
    • (2011) Mol. Cell , vol.42 , pp. 662-672
    • Hao, Q.1
  • 35
    • 84862819569 scopus 로고    scopus 로고
    • A putative myristoylated 2C-type protein phosphatase, PP2C74, interacts with SnRK1 in Arabidopsis
    • D. Tsugama, S. Liu, and T. Takano A putative myristoylated 2C-type protein phosphatase, PP2C74, interacts with SnRK1 in Arabidopsis FEBS Lett. 586 2012 693 698
    • (2012) FEBS Lett. , vol.586 , pp. 693-698
    • Tsugama, D.1    Liu, S.2    Takano, T.3
  • 36
    • 0029805520 scopus 로고    scopus 로고
    • Protein phosphatase activity of abscisic acid insensitive 1 (ABI1) protein from Arabidopsis thaliana
    • N. Bertauche, J. Leung, and J. Giraudat Protein phosphatase activity of abscisic acid insensitive 1 (ABI1) protein from Arabidopsis thaliana Eur. J. Biochem. 241 1996 193 200
    • (1996) Eur. J. Biochem. , vol.241 , pp. 193-200
    • Bertauche, N.1    Leung, J.2    Giraudat, J.3
  • 37
    • 0031131635 scopus 로고    scopus 로고
    • The Arabidopsis ABSCISIC ACID-INSENSITIVE2 (ABI2) and ABI1 genes encode homologous protein phosphatases 2C involved in abscisic acid signal transduction
    • J. Leung, S. Merlot, and J. Giraudat The Arabidopsis ABSCISIC ACID-INSENSITIVE2 (ABI2) and ABI1 genes encode homologous protein phosphatases 2C involved in abscisic acid signal transduction Plant Cell 9 1997 759 771
    • (1997) Plant Cell , vol.9 , pp. 759-771
    • Leung, J.1    Merlot, S.2    Giraudat, J.3
  • 38
    • 0033575250 scopus 로고    scopus 로고
    • Kinetic analysis of human serine/threonine protein phosphatase 2Calpha
    • C.C. Fjeld, and J.M. Denu Kinetic analysis of human serine/threonine protein phosphatase 2Calpha J. Biol. Chem. 274 1999 20336 20343
    • (1999) J. Biol. Chem. , vol.274 , pp. 20336-20343
    • Fjeld, C.C.1    Denu, J.M.2
  • 39
    • 0030953974 scopus 로고    scopus 로고
    • The Snf1 protein kinase and its activating subunit, Snf4, interact with distinct domains of the Sip1/Sip2/Gal83 component in the kinase complex
    • R. Jiang, and M. Carlson The Snf1 protein kinase and its activating subunit, Snf4, interact with distinct domains of the Sip1/Sip2/Gal83 component in the kinase complex Mol. Cell Biol. 17 1997 2099 2106
    • (1997) Mol. Cell Biol. , vol.17 , pp. 2099-2106
    • Jiang, R.1    Carlson, M.2
  • 40
    • 0035986769 scopus 로고    scopus 로고
    • A novel higher plant protein tyrosine phosphatase interacts with SNF1-related protein kinases via a KIS (kinase interaction sequence) domain
    • A.P. Fordham-Skelton, P. Chilley, V. Lumbreras, S. Reignoux, T.R. Fenton, C.C. Dahm, M. Pages, and J.A. Gatehouse A novel higher plant protein tyrosine phosphatase interacts with SNF1-related protein kinases via a KIS (kinase interaction sequence) domain Plant J. 29 2002 705 715
    • (2002) Plant J. , vol.29 , pp. 705-715
    • Fordham-Skelton, A.P.1    Chilley, P.2    Lumbreras, V.3    Reignoux, S.4    Fenton, T.R.5    Dahm, C.C.6    Pages, M.7    Gatehouse, J.A.8
  • 41
    • 0028955176 scopus 로고
    • An emerging family of dual specificity MAP kinase phosphatases
    • S.M. Keyse An emerging family of dual specificity MAP kinase phosphatases Biochim. Biophys. Acta 1265 1995 152 160
    • (1995) Biochim. Biophys. Acta , vol.1265 , pp. 152-160
    • Keyse, S.M.1
  • 42
    • 70849099954 scopus 로고    scopus 로고
    • MAP kinase phosphatase1 and protein tyrosine phosphatase1 are repressors of salicylic acid synthesis and SNC1-mediated responses in Arabidopsis
    • S. Bartels MAP kinase phosphatase1 and protein tyrosine phosphatase1 are repressors of salicylic acid synthesis and SNC1-mediated responses in Arabidopsis Plant Cell 21 2009 2884 2897
    • (2009) Plant Cell , vol.21 , pp. 2884-2897
    • Bartels, S.1
  • 43
    • 0032143523 scopus 로고    scopus 로고
    • A starch-accumulating mutant of Arabidopsis thaliana deficient in a chloroplastic starch-hydrolysing enzyme
    • S.C. Zeeman, F. Northrop, A.M. Smith, and T. Rees A starch-accumulating mutant of Arabidopsis thaliana deficient in a chloroplastic starch-hydrolysing enzyme Plant J. 15 1998 357 365
    • (1998) Plant J. , vol.15 , pp. 357-365
    • Zeeman, S.C.1    Northrop, F.2    Smith, A.M.3    Rees, T.4
  • 44
    • 62549132079 scopus 로고    scopus 로고
    • STARCH-EXCESS4 is a laforin-like Phosphoglucan phosphatase required for starch degradation in Arabidopsis thaliana
    • O. Kotting STARCH-EXCESS4 is a laforin-like Phosphoglucan phosphatase required for starch degradation in Arabidopsis thaliana Plant Cell 21 2009 334 346
    • (2009) Plant Cell , vol.21 , pp. 334-346
    • Kotting, O.1
  • 45
    • 0035252894 scopus 로고    scopus 로고
    • Protein phosphatase 2A: A highly regulated family of serine/threonine phosphatases implicated in cell growth and signalling
    • V. Janssens, and J. Goris Protein phosphatase 2A: a highly regulated family of serine/threonine phosphatases implicated in cell growth and signalling Biochem. J. 353 2001 417 439
    • (2001) Biochem. J. , vol.353 , pp. 417-439
    • Janssens, V.1    Goris, J.2
  • 46
    • 0346728803 scopus 로고    scopus 로고
    • Functional diversity of protein phosphatase-1, a cellular economizer and reset button
    • H. Ceulemans, and M. Bollen Functional diversity of protein phosphatase-1, a cellular economizer and reset button Physiol. Rev. 84 2004 1 39
    • (2004) Physiol. Rev. , vol.84 , pp. 1-39
    • Ceulemans, H.1    Bollen, M.2
  • 48
    • 0020540151 scopus 로고
    • The protein phosphatases involved in cellular regulation. 1. Classification and substrate specificities
    • T.S. Ingebritsen, and P. Cohen The protein phosphatases involved in cellular regulation. 1. Classification and substrate specificities Eur. J. Biochem. 132 1983 255 261
    • (1983) Eur. J. Biochem. , vol.132 , pp. 255-261
    • Ingebritsen, T.S.1    Cohen, P.2
  • 49
    • 33845693412 scopus 로고    scopus 로고
    • Diverse physiological functions for dual-specificity MAP kinase phosphatases
    • R.J. Dickinson, and S.M. Keyse Diverse physiological functions for dual-specificity MAP kinase phosphatases J. Cell Sci. 119 2006 4607 4615
    • (2006) J. Cell Sci. , vol.119 , pp. 4607-4615
    • Dickinson, R.J.1    Keyse, S.M.2
  • 51
    • 79960225328 scopus 로고    scopus 로고
    • Arabidopsis MAP kinase phosphatase 1 is phosphorylated and activated by its substrate AtMPK6
    • H.C. Park Arabidopsis MAP kinase phosphatase 1 is phosphorylated and activated by its substrate AtMPK6 Plant Cell Rep. 30 2011 1523 1531
    • (2011) Plant Cell Rep. , vol.30 , pp. 1523-1531
    • Park, H.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.