-
1
-
-
38349128462
-
A genome-wide association study implicates diacylglycerol kinase eta (DGKH) and several other genes in the etiology of bipolar disorder
-
BAUM, A. E., AKULA, N., CABANERO, M., CARDONA, I., CORONA, W., KLEMENS, B., SCHULZE, T. G., CICHON, S., RIETSCHEL, M., NÖTHEN, M. M. and others. (2007). A genome-wide association study implicates diacylglycerol kinase eta (DGKH) and several other genes in the etiology of bipolar disorder. Molecular Psychiatry 13, 197-207.
-
(2007)
Molecular Psychiatry
, vol.13
, pp. 197-207
-
-
Baum, A.E.1
Akula, N.2
Cabanero, M.3
Cardona, I.4
Corona, W.5
Klemens, B.6
Schulze, T.G.7
Cichon, S.8
Rietschel, M.9
Nöthen, M.M.10
-
3
-
-
0034602774
-
Knowledge-based analysis of microarray gene expression data by using support vector machines
-
DOI 10.1073/pnas.97.1.262
-
BROWN, M. P. S., GRUNDY, W. N., LIN, D., CRISTIANINI, N., SUGNET, C. W., FUREY, T. S., ARES, M. AND HAUSSLER, D. (2000). Knowledge-based analysis of microarray gene expression data by using support vector machines. Proceedings of the National Academy of Sciences 97, 262-267. (Pubitemid 30055819)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.1
, pp. 262-267
-
-
Brown, M.P.S.1
Grundy, W.N.2
Lin, D.3
Cristianini, N.4
Sugnet, C.W.5
Furey, T.S.6
Ares Jr., M.7
Haussler, D.8
-
4
-
-
70349138992
-
Bayes and empirical Bayes methods for data analysis
-
CARLIN, B. P. AND LOUIS, T. A. (1997). Bayes and empirical Bayes methods for data analysis. Statistics and Computing 7, 153-154.
-
(1997)
Statistics and Computing
, vol.7
, pp. 153-154
-
-
Carlin, B.P.1
Louis, T.A.2
-
5
-
-
0028220901
-
Robust genetic linkage analysis based on a score test of homogeneity: The weighted pairwise correlation statistic
-
COMMENGES, D. (1994). Robust genetic linkage analysis based on a score test of homogeneity: the weighted pairwise correlation statistic. Genetic Epidemiology 11, 189-200. (Pubitemid 24138846)
-
(1994)
Genetic Epidemiology
, vol.11
, Issue.2
, pp. 189-200
-
-
Commenges, D.1
-
6
-
-
22744458472
-
Pathways to the analysis of microarray data
-
DOI 10.1016/j.tibtech.2005.05.011, PII S0167779905001411
-
CURTIS, R. K., ORESIC, M. AND VIDAL-PUIG, A. (2005). Pathways to the analysis of microarray data. TRENDS in Biotechnology 23, 429-435. (Pubitemid 41032923)
-
(2005)
Trends in Biotechnology
, vol.23
, Issue.8
, pp. 429-435
-
-
Curtis, R.K.1
Oresic, M.2
Vidal-Puig, A.3
-
7
-
-
37849022459
-
Identification of key processes underlying cancer pheno-types using biologic pathway analysis
-
EFRONI, S., SCHAEFER, C. F. AND BUETOW, K. H. (2007). Identification of key processes underlying cancer pheno-types using biologic pathway analysis. PLoS One 2, 425.
-
(2007)
PLoS One
, vol.2
, pp. 425
-
-
Efroni, S.1
Schaefer, C.F.2
Buetow, K.H.3
-
8
-
-
34548032087
-
Genome-wide association studies provide new insights into type 2 diabetes aetiology
-
DOI 10.1038/nrg2178, PII NRG2178
-
FRAYLING, T. M. (2007). Genome-wide association studies provide new insights into type 2 diabetes aetiology. Nature Reviews Genetics 8, 657-662. (Pubitemid 47281993)
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.9
, pp. 657-662
-
-
Frayling, T.M.1
-
9
-
-
18744406044
-
Testing association of a pathway with survival using gene expression data
-
DOI 10.1093/bioinformatics/bti267
-
GOEMAN, J. J., OOSTING, J., CLETON-JANSEN, A. M., ANNINGA, J. K. AND VAN HOUWELINGEN, H. C. (2005). Testing association of a pathway with survival using gene expression data. Bioinformatics 21, 1950-1957. (Pubitemid 40668031)
-
(2005)
Bioinformatics
, vol.21
, Issue.9
, pp. 1950-1957
-
-
Goeman, J.J.1
Oosting, J.2
Cleton-Jansen, A.-M.3
Anninga, J.K.4
Van Houwelingen, H.C.5
-
11
-
-
0040889331
-
The local power of the efficient scores test statistic
-
HARRIS, P. AND PEERS, H. W. (1980). The local power of the efficient scores test statistic. Biometrika 67, 525.
-
(1980)
Biometrika
, vol.67
, pp. 525
-
-
Harris, P.1
Peers, H.W.2
-
12
-
-
34250001297
-
A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer
-
DOI 10.1038/ng2075, PII NG2075
-
HUNTER, D. J., KRAFT, P., JACOBS, K. B., COX, D. G., YEAGER, M., HANKINSON, S. E., WACHOLDER, S., WANG, Z., WELCH, R., HUTCHINSON, A. and others. (2007). A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer. Nature Genetics 39, 870-874. (Pubitemid 47014500)
-
(2007)
Nature Genetics
, vol.39
, Issue.7
, pp. 870-874
-
-
Hunter, D.J.1
Kraft, P.2
Jacobs, K.B.3
Cox, D.G.4
Yeager, M.5
Hankinson, S.E.6
Wacholder, S.7
Wang, Z.8
Welch, R.9
Hutchinson, A.10
Wang, J.11
Yu, K.12
Chatterjee, N.13
Orr, N.14
Willett, W.C.15
Colditz, G.A.16
Ziegler, R.G.17
Berg, C.D.18
Buys, S.S.19
McCarty, C.A.20
Feigelson, H.S.21
Calle, E.E.22
Thun, M.J.23
Hayes, R.B.24
Tucker, M.25
Gerhard, D.S.26
Fraumeni, J.F.27
Hoover, R.N.28
Thomas, G.29
Chanock, S.J.30
more..
-
13
-
-
40749104728
-
A Powerful and Flexible Multilocus Association Test for Quantitative Traits
-
DOI 10.1016/j.ajhg.2007.10.010, PII S0002929708000888
-
KWEE, L. C., LIU, D., LIN, X., GHOSH, D. AND EPSTEIN, M. P. (2008). A powerful and flexible multilocus association test for quantitative traits. The American Journal of Human Genetics 82, 386-397. (Pubitemid 351726104)
-
(2008)
American Journal of Human Genetics
, vol.82
, Issue.2
, pp. 386-397
-
-
Kwee, L.C.1
Liu, D.2
Lin, X.3
Ghosh, D.4
Epstein, M.P.5
-
14
-
-
15944388957
-
An efficient Monte Carlo approach to assessing statistical significance in genomic studies
-
DOI 10.1093/bioinformatics/bti053
-
LIN, D. Y. (2005). An efficient Monte Carlo approach to assessing statistical significance in genomic studies. Bioinformatics 21, 781-7. (Pubitemid 40439414)
-
(2005)
Bioinformatics
, vol.21
, Issue.6
, pp. 781-787
-
-
Lin, D.Y.1
-
15
-
-
48249142391
-
Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via logistic mixed models
-
LIU, D., GHOSH, D. AND LIN, X. (2008). Estimation and testing for the effect of a genetic pathway on a disease outcome using logistic kernel machine regression via logistic mixed models. BMC bioinformatics 9, 292.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 292
-
-
Liu, D.1
Ghosh, D.2
Lin, X.3
-
16
-
-
36749013671
-
Semiparametric regression of multidimensional genetic pathway data: Least-squares kernel machines and linear mixed models
-
DOI 10.1111/j.1541-0420.2007.00799.x
-
LIU, D., LIN, X. AND GHOSH, D. (2007). Semiparametric regression of multidimensional genetic pathway data: least-squares kernel machines and linear mixed models. Biometrics 63, 1079-1088. (Pubitemid 350212565)
-
(2007)
Biometrics
, vol.63
, Issue.4
, pp. 1079-1088
-
-
Liu, D.1
Lin, X.2
Ghosh, D.3
-
17
-
-
77950544743
-
A note on the effect on power of score tests via dimension reduction by penalized regression under the null
-
MARTINEZ, J. G., CARROLL, R. J., MULLER, S., SAMPSON, J. N. AND CHATTERJEE, N. (2010). A note on the effect on power of score tests via dimension reduction by penalized regression under the null. The International Journal of Biostatistics 6, 12.
-
(2010)
The International Journal of Biostatistics
, vol.6
, pp. 12
-
-
Martinez, J.G.1
Carroll, R.J.2
Muller, S.3
Sampson, J.N.4
Chatterjee, N.5
-
19
-
-
50249187303
-
On multiple-testing correction in genome-wide association studies
-
MOSKVINA, V. AND SCHMIDT, K. M. (2008). On multiple-testing correction in genome-wide association studies. Genetic Epidemiology 32, 567-573.
-
(2008)
Genetic Epidemiology
, vol.32
, pp. 567-573
-
-
Moskvina, V.1
Schmidt, K.M.2
-
20
-
-
1842539516
-
A Simple Correction for Multiple Testing for Single-Nucleotide Polymorphisms in Linkage Disequilibrium with Each Other
-
DOI 10.1086/383251
-
NYHOLT, D. R. (2004). A simple correction for multiple testing for single-nucleotide polymorphisms in linkage disequilibrium with each other. The American Journal of Human Genetics 74, 765-769. (Pubitemid 38420107)
-
(2004)
American Journal of Human Genetics
, vol.74
, Issue.4
, pp. 765-769
-
-
Nyholt, D.R.1
-
21
-
-
33746512512
-
Principal components analysis corrects for stratification in genome-wide association studies
-
DOI 10.1038/ng1847, PII NG1847
-
PRICE, A. L., PATTERSON, N. J., PLENGE, R. M., WEINBLATT, M. E., SHADICK, N. A. AND REICH, D. (2006). Principal components analysis corrects for stratification in genome-wide association studies. Nature Genetics 38, 904-909. (Pubitemid 44141658)
-
(2006)
Nature Genetics
, vol.38
, Issue.8
, pp. 904-909
-
-
Price, A.L.1
Patterson, N.J.2
Plenge, R.M.3
Weinblatt, M.E.4
Shadick, N.A.5
Reich, D.6
-
22
-
-
0002394561
-
Large sample tests of statistical hypotheses concerning several parameters with applications to problems of estimation
-
RAO, C. R. (1948). Large sample tests of statistical hypotheses concerning several parameters with applications to problems of estimation. Mathematical Proceedings of the Cambridge Philosophical Society, 44, 50-57.
-
(1948)
Mathematical Proceedings of the Cambridge Philosophical Society
, vol.44
, pp. 50-57
-
-
Rao, C.R.1
-
24
-
-
34247554965
-
Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis
-
DOI 10.1038/ng2032, PII NG2032
-
RIOUX, J. D., XAVIER, R. J., TAYLOR, K. D., SILVERBERG, M. S., GOYETTE, P., HUETT, A., GREEN, T., KUBALLA, P., BARMADA, M. M., DATTA, L. W. and others. (2007). Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis. Nature Genetics 39, 596-604. (Pubitemid 46676115)
-
(2007)
Nature Genetics
, vol.39
, Issue.5
, pp. 596-604
-
-
Rioux, J.D.1
Xavier, R.J.2
Taylor, K.D.3
Silverberg, M.S.4
Goyette, P.5
Huett, A.6
Green, T.7
Kuballa, P.8
Barmada, M.M.9
Datta, L.W.10
Shugart, Y.Y.11
Griffiths, A.M.12
Targan, S.R.13
Ippoliti, A.F.14
Bernard, E.-J.15
Mei, L.16
Nicolae, D.L.17
Regueiro, M.18
Schumm, L.P.19
Steinhart, A.H.20
Rotter, J.I.21
Duerr, R.H.22
Cho, J.H.23
Daly, M.J.24
Brant, S.R.25
more..
-
25
-
-
62849128600
-
Genome-wide association for major depressive disorder: A possible role for the presynaptic protein piccolo
-
SULLIVAN, P. F., DE GEUS, E. J. C., WILLEMSEN, G., JAMES, M. R., SMIT, J. H., ZANDBELT, T., AROLT, V., BAUNE, B. T., BLACKWOOD, D., CICHON, S. and others. (2008). Genome-wide association for major depressive disorder: a possible role for the presynaptic protein piccolo. Molecular Psychiatry 14, 359-375.
-
(2008)
Molecular Psychiatry
, vol.14
, pp. 359-375
-
-
Sullivan, P.F.1
De Geus, E.J.C.2
Willemsen, G.3
James, M.R.4
Smit, J.H.5
Zandbelt, T.6
Arolt, V.7
Baune, B.T.8
Blackwood, D.9
Cichon, S.10
-
26
-
-
0026468055
-
Empirical Bayes methods for testing associations with large numbers of candidate genes in the presence of environmental risk factors, with applications to HLA associations in IDDM
-
THOMAS, D., LANGHOLZ, B., CLAYTON, D., PITKÄNIEMI, J., TUOMILEHTO-WOLF, E. AND TUOMILEHTO, J. (1992). Empirical Bayes methods for testing associations with large numbers of candidate genes in the presence of environmental risk factors, with applications to HLA associations in IDDM. Annals of Medicine 24, 387-92.
-
(1992)
Annals of Medicine
, vol.24
, pp. 387-392
-
-
Thomas, D.1
Langholz, B.2
Clayton, D.3
Pitkäniemi, J.4
Tuomilehto-Wolf, E.5
Tuomilehto, J.6
-
27
-
-
57649208428
-
Reproducibility of differential gene detection across multiple microarray studies. in Engineering in Medicine and Biology Society 2007
-
VO, T. M., PHAN, J. H., HUYNH, K. N. T. AND WANG, M. D. (2007). Reproducibility of differential gene detection across multiple microarray studies. In Engineering in Medicine and Biology Society, 2007. 29th Annual International Conference of the IEEE, pp. 4231-4234.
-
(2007)
29th Annual International Conference of the IEEE
, pp. 4231-4234
-
-
M, V.O.T.1
Phan, J.H.2
Huynh, K.N.T.3
Wang, M.D.4
-
28
-
-
38749149611
-
Genome-wide Association Study Identifies Genes for Biomarkers of Cardiovascular Disease: Serum Urate and Dyslipidemia
-
DOI 10.1016/j.ajhg.2007.11.001, PII S0002929707000262
-
WALLACE, C., NEWHOUSE, S. J., BRAUND, P., ZHANG, F., TOBIN, M., FALCHI, M., AHMADI, K., DOBSON, R. J., MARÇANO, A. C. B., HAJAT, C. and others. (2008). Genome-wide association study identifies genes for biomarkers of cardiovascular disease: serum urate and dyslipidemia. The American Journal of Human Genetics 82, 139-149. (Pubitemid 351735954)
-
(2008)
American Journal of Human Genetics
, vol.82
, Issue.1
, pp. 139-149
-
-
Wallace, C.1
Newhouse, S.J.2
Braund, P.3
Zhang, F.4
Tobin, M.5
Falchi, M.6
Ahmadi, K.7
Dobson, R.J.8
Marcano, A.C.B.9
Hajat, C.10
Burton, P.11
Deloukas, P.12
Brown, M.13
Connell, J.M.14
Dominiczak, A.15
Lathrop, G.M.16
Webster, J.17
Farrall, M.18
Spector, T.19
Samani, N.J.20
Caulfield, M.J.21
Munroe, P.B.22
more..
-
29
-
-
77953121307
-
Powerful SNP-set analysis for case-control genome-wide association studies
-
WU, M. C., KRAFT, P., EPSTEIN, M. P., TAYLOR, D. M., CHANOCK, S. J., HUNTER, D. J. AND LIN, X. (2010). Powerful SNP-set analysis for case-control genome-wide association studies. American Journal of Human Genetics 86, 929.
-
(2010)
American Journal of Human Genetics
, vol.86
, pp. 929
-
-
C, W.U.M.1
Kraft, P.2
Epstein, M.P.3
Taylor, D.M.4
Chanock, S.J.5
Hunter, D.J.6
Lin, X.7
-
30
-
-
34247548755
-
Genome-wide association study of prostate cancer identifies a second risk locus at 8q24
-
DOI 10.1038/ng2022, PII NG2022
-
YEAGER, M., ORR, N., HAYES, R. B., JACOBS, K. B., KRAFT, P., WACHOLDER, S., MINICHIELLO, M. J., FEARNHEAD, P., YU, K., CHATTERJEE, N. and others. (2007). Genome-wide association study of prostate cancer identifies a second risk locus at 8q24. Nature genetics 39, 645-649. (Pubitemid 46676108)
-
(2007)
Nature Genetics
, vol.39
, Issue.5
, pp. 645-649
-
-
Yeager, M.1
Orr, N.2
Hayes, R.B.3
Jacobs, K.B.4
Kraft, P.5
Wacholder, S.6
Minichiello, M.J.7
Fearnhead, P.8
Yu, K.9
Chatterjee, N.10
Wang, Z.11
Welch, R.12
Staats, B.J.13
Calle, E.E.14
Feigelson, H.S.15
Thun, M.J.16
Rodriguez, C.17
Albanes, D.18
Virtamo, J.19
Weinstein, S.20
Schumacher, F.R.21
Giovannucci, E.22
Willett, W.C.23
Cancel-Tassin, G.24
Cussenot, O.25
Valeri, A.26
Andriole, G.L.27
Gelmann, E.P.28
Tucker, M.29
Gerhard, D.S.30
Fraumeni Jr., J.F.31
Hoover, R.32
Hunter, D.J.33
Chanock, S.J.34
Thomas, G.35
more..
-
31
-
-
0036143307
-
Truncated product method for combining P-values
-
DOI 10.1002/gepi.0042
-
ZAYKIN, D. V., ZHIVOTOVSKY, L. A., WESTFALL, P. H. AND WEIR, B. S. (2002). Truncated product method for combining p-values. Genetic Epidemiology 22, 170-185. (Pubitemid 34081490)
-
(2002)
Genetic Epidemiology
, vol.22
, Issue.2
, pp. 170-185
-
-
Zaykin, D.V.1
Zhivotovsky, L.A.2
Westfall, P.H.3
Weir, B.S.4
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