Gibel carp Carassius auratus gut microbiota after oral administration of trimethoprim/sulfamethoxazole

Diseases of Aquatic Organisms

Volumn 99, Issue 3, 2012, Pages 207-213

  Liu, Yuchun ^a   Zhou, Zhigang ^a   Wu, Ning ^b   Tao, Yu ^b   Xu, Li ^a   Cao, Yanan ^a   Zhang, Yuting ^a   Yao, Bin ^a  

^a INSTITUTE OF PLANT PROTECTION   (China)

^b BEIJING FORESTRY UNIVERSITY   (China)

Author keywords

Gastrointestinal microbiota; Gibel carp; PCR DGGE; Trimethoprim sulfamethoxazole

Indexed keywords

BACTERIAL RNA; COTRIMOXAZOLE; RNA 16S;

ANTIBIOTICS; AQUACULTURE INDUSTRY; BACTERIAL DISEASE; CYPRINID; DRUG RESISTANCE; ELECTROKINESIS; EMERGENCE; INFECTIOUS DISEASE; MICROBIAL COMMUNITY; PATHOGENICITY; POLYMERASE CHAIN REACTION;

ANIMAL; ANIMAL DISEASE; ARTICLE; BACTERIAL INFECTION; BACTERIUM; CLASSIFICATION; DENATURING GRADIENT GEL ELECTROPHORESIS; ENTERITIS; FISH DISEASE; GASTROINTESTINAL TRACT; GENETICS; GOLDFISH; MICROBIOLOGY; ORAL DRUG ADMINISTRATION;

ADMINISTRATION, ORAL; ANIMALS; BACTERIA; BACTERIAL INFECTIONS; DENATURING GRADIENT GEL ELECTROPHORESIS; ENTERITIS; FISH DISEASES; GASTROINTESTINAL TRACT; GOLDFISH; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; TRIMETHOPRIM-SULFAMETHOXAZOLE COMBINATION;

ACTINOBACTERIA; BACTERIA (MICROORGANISMS); CARASSIUS AURATUS; CYPRINIDAE; ENTEROBACTERIACEAE; FIRMICUTES; LATES; PROTEOBACTERIA;

EID: 84866251035     PISSN: 01775103     EISSN: 16161580     Source Type: Journal    
DOI: 10.3354/dao02477     Document Type: Article

References (32)

1. Altschul SF, Gish W, MillerW, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215: 403-410
2. Asfie M, Yoshijima T, Sugita H (2003) Characterization of the goldfish fecal microflora by the fluorescent in situ hybridization method. Fish Sci 69: 21-26 (Pubitemid 36264352)
3. Austin B, Austin DA (1999) Bacterial fish pathogens: disease of farmed and wild fish, 3rd edn. Springer-Praxis, Chichester
4. Baldwin TJ, Newton JC (1993) Pathogenesis of enteric septicemia of channel catfish, caused by Edwardsiella ictaluri. Bacteriologic and light and electron microscopic findings. J Aquat Anim Health 5: 189-198
5. Brady SF (2007) Construction of soil environmental DNA cosmid libraries and screening for clones that pro - duce biologically active small molecules. Nat Protoc 2: 1297-1305 (Pubitemid 46901307)
6. Broughton EI, Walker DG (2009) Prevalence of antibioticresistant Salmonella in fish in Guangdong, China. Foodborne Pathog Dis 6: 519-521
7. Cabello FC (2006) Heavy use of prophylactic antibiotics in aquaculture: a growing problem for human and animal health and for the environment. Environ Microbiol 8: 1137-1144 (Pubitemid 43901744)
8. Chu WH, Lu CP (2000) Pathogenicity of Aeromonas hydrophila extracellular protease. J Nanjing Agric Univ 23: 80-84
9. Clapper WE, Meade GH (1963) Normal flora of the nose, throat, and lower intestine of dogs. J Bacteriol 85: 643-648
10. Cole JR, Chai B, Farris RJ, Wang Q, Julam SA, McGarrel DM, Tiedje JM (2005) The ribosomal database project (RDP-II): sequences and tools for high-throughput rRNA analysis. Nucleic Acids Res 33: D294-D296 (Pubitemid 40207881)
11. Donskey CJ (2006) Antibiotic regimens and intestinal colonization with antibiotic-resistant Gram-negative bacilli. Clin Infect Dis 43(Suppl 2): S62-S69 (Pubitemid 44267142)
12. Fass RJ, Barnishan J, Solomon MC, Ayers LW (1996) In vitro activities of quinolones, β-lactams, tobramycin, and trimethoprim-sulfamethoxazole against nonfermentative gram-negative bacilli. Antimicrob Agents Chemother 40: 1412-1418 (Pubitemid 26169051)
13. Gao PP, Luo Y, Zhou QX, Mao DQ (2009) Research advancement of antibiotics resistance genes (ARGs) in aquaculture environment. Asian J Ecotoxicol 6: 770-779
14. Hatha M, Vivekanandam AA, Joice GJ, Christol GJ (2005) Antibiotic resistance pattern of motile aeromonads from farm raised freshwater fish. Int J Food Microbiol 98: 131-134 (Pubitemid 40164938)
15. He S, Zhou Z, Liu Y, Shi P, Yao B, Ringø E, Yoon I (2009) Effects of dietary Saccharomyces cerevisiae fermentation product (DVAQUA®) on growth performance, intestinal autochthonous bacterial community and nonspecific immunity of hybrid tilapia (Oreochromis niloticus f × O. aureusm) cultured in cages. Aquaculture 294: 99-107
16. LeaMaster BR, Walsh WA, Brock JA, Fujioka RS (1997) Cold stress-induced changes in the aerobic heterotrophic gastrointestinal tract bacterial flora of red hybrid tilapia. J Fish Biol 50: 770-780 (Pubitemid 27195191)
17. Liu YC, Zhou ZG, Yao B, Shi PJ, He SX, Benjamin sen Hølvold L, Ringø E (2008) Effect of intraperitoneal injection of immunostimulatory substances on allochthonous gut microbiota of Atlantic salmon (Salmo salar L.) determined using denaturing gradient gel electrophoresis. Aquacult Res 39: 635-646 (Pubitemid 351549619)
18. Masters PA, O'Bryan TA, Zurlo J, Miller DQ, Joshi N (2003) Trimethoprim-sulfamethoxazole revisited. Arch Intern Med 163: 402-410 (Pubitemid 36241016)
19. Michel C, Kerouault B, Martin C (2003) Chloramphenicol and florfenicol susceptibility of fish-pathogenic bacteria isolated in France: comparison of minimum inhibitory concentration, using recommended provisory standards for fish bacteria. J Appl Microbiol 95: 1008-1015 (Pubitemid 37357383)
20. Muyzer G, Smalla K (1998) Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology. Antonie van Leeuwenhoek 73: 127-141 (Pubitemid 28209906)
21. Muyzer G, de Waal EC, Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction- amplified genes coding for 16S rRNA. Appl Environ Microbiol 59: 695-700 (Pubitemid 23072343)
22. Nayak SK (2010) Role of gastrointestinal microbiota in fish. Aquacult Res 41: 1553-1573
23. Naylor RL, Goldburg RJ, Primavera JH, Kautsky N and others (2000) Effect of aquaculture on world fish supplies. Nature 405: 1017-1024 (Pubitemid 30447778)
24. Rodríguez LA, Vivas J, Gallardo CS, Acosta F, Barbeyto L, Real F (1999) Identification of Hafnia alvei with the MicroScan WalkAway system. J Clin Microbiol 37: 4186-4188
25. Sekirov I, Finlay BB (2009) The role of the intestinal microbiota in enteric infection. J Physiol 587: 4159-4167
26. Sun HY, Deng SP, Raun WR (2004) Bacterial community structure and diversity in a century-old manure-treated agroecosystem. Appl Environ Microbiol 70: 5868-5874 (Pubitemid 39471829)
27. Van der Veen EL, Schilder AGM, Timmers TK, Rovers MM, Fluit AC, Bonten MJ, Leverstein-van Hall MA (2009) Effect of long-term trimethoprim/ sulfamethoxazole treatment on resistance and integron prevalence in the intestinal flora: a randomized, double-blind, placebocontrolled trial in children. J Antimicrob Chemother 63: 1011-1016
28. Vollaard EJ, Clasener HA (1994) Colonization resistance. Antimicrob Agents Chemother 38: 409-414 (Pubitemid 24072223)
29. Xu YHG, Ma XL, Chen XM, Wang ZX, Li H, Wen H (2001) Isolation, identification and research of resistance from Aeromonas strains to genospecies level. Acta Universities Medicinalis Anhui 36: 39-41
30. Zhou ZG, Shi PJ, Yao B, He SX, Su Y, Ding Z (2007) Comparison of the predominant bacterial community structure in the gastrointestinal wall between Lutjanus sebae and Ephippus orbis based on 16S rDNA PCR-DGGE fingerprint. Acta Hydrobiol Sin 31: 78-84
31. Zhou ZG, Liu YC, Shi PJ, He SX, Yao B, Ringø E (2009) Molecular characterization of the autochthonous microbiota in the gastrointestinal tract of adult yellow grouper (Epinephelus awoara) cultured in cages. Aquaculture 286: 184-189
32. Zoetendal EG, Rajilic-Stojanovic M, de Vos WM (2008) High-throughput diversity and functionality analysis of the gastrointestinal tract microbiota. Gut 57: 1605-1615