-
1
-
-
77749285639
-
Molecular indicators used in the development of predictive models for microbial source tracking
-
Ballestè E, Bonjoch X, Belanche LA, Blanch AR. 2010. Molecular indicators used in the development of predictive models for microbial source tracking. Appl. Environ. Microbiol. 76:1789-1795.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 1789-1795
-
-
Ballestè, E.1
Bonjoch, X.2
Belanche, L.A.3
Blanch, A.R.4
-
2
-
-
0033774937
-
A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA
-
Bernhard AE, Field KG. 2000. A PCR assay to discriminate human and ruminant feces on the basis of host differences in Bacteroides-Prevotella genes encoding 16S rRNA. Appl. Environ. Microbiol. 66:4571-4574.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 4571-4574
-
-
Bernhard, A.E.1
Field, K.G.2
-
3
-
-
33748772520
-
Integrated analysis of established and novel microbial and chemical methods for microbial source tracking
-
Blanch AR, et al. 2006. Integrated analysis of established and novel microbial and chemical methods for microbial source tracking. Appl. Environ.Microbiol. 72:5915-5926.
-
(2006)
Appl. Environ.Microbiol.
, vol.72
, pp. 5915-5926
-
-
Blanch, A.R.1
-
4
-
-
77954473098
-
Modeling and evaluation of compliance to water quality regulations in bathing areas on the Daoulas catchment and estuary (France)
-
Bougeard M, Le Saux JC, Jouan M, Durand G, Pommepuy M. 2010.Modeling and evaluation of compliance to water quality regulations in bathing areas on the Daoulas catchment and estuary (France). Water Sci. Technol. 61:2521-2530.
-
(2010)
Water Sci. Technol.
, vol.61
, pp. 2521-2530
-
-
Bougeard, M.1
Le Saux, J.C.2
Jouan, M.3
Durand, G.4
Pommepuy, M.5
-
5
-
-
0242489236
-
Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
-
Cole D, Long SC, Sobsey MD. 2003. Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl. Environ. Microbiol. 69:6507-6514.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 6507-6514
-
-
Cole, D.1
Long, S.C.2
Sobsey, M.D.3
-
6
-
-
0034126841
-
Evaluation of F-specific RNA bacteriophage as a candidate human enteric virus indicator for bivalve molluscan shellfish
-
Dore WJ, Henshilwood K, Lees DN. 2000. Evaluation of F-specific RNA bacteriophage as a candidate human enteric virus indicator for bivalve molluscan shellfish. Appl. Environ. Microbiol. 66:1280-1285.
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 1280-1285
-
-
Dore, W.J.1
Henshilwood, K.2
Lees, D.N.3
-
7
-
-
33847768960
-
European Parliament and Council
-
vol DIRECTIVE 2006/7/EC. Official Journal of the European Union. EUROPA, Brussels, Belgium
-
European Parliament and Council. 2006. The management of bathing water quality and repealing Directive 76/160/EEC, p 37-51, vol DIRECTIVE 2006/7/EC. Official Journal of the European Union. EUROPA, Brussels, Belgium.
-
(2006)
The management of bathing water quality and repealing Directive 76/160/EEC
, pp. 37-51
-
-
-
9
-
-
34547599998
-
Validation of host-specific Bacteroidales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim of the European Union
-
Gawler AH, et al. 2007. Validation of host-specific Bacteroidales 16S rRNA genes as markers to determine the origin of faecal pollution in Atlantic Rim of the European Union. Water Res. 41:3780-3784.
-
(2007)
Water Res.
, vol.41
, pp. 3780-3784
-
-
Gawler, A.H.1
-
10
-
-
77957016411
-
Development of microbial and chemical MST tools to identify the origin of the faecal pollution in bathing and shellfish harvesting waters in France
-
Gourmelon M, et al. 2010. Development of microbial and chemical MST tools to identify the origin of the faecal pollution in bathing and shellfish harvesting waters in France. Water Res. 44:4812-4824.
-
(2010)
Water Res.
, vol.44
, pp. 4812-4824
-
-
Gourmelon, M.1
-
11
-
-
34547754433
-
Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries
-
Gourmelon M, et al.2007. Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries. Appl. Environ. Microbiol. 734857-4866.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4857-4866
-
-
Gourmelon, M.1
-
12
-
-
67651123112
-
Application of real-time PCR assays to genotyping of F-specific phages in river water and sediments in Japan
-
Haramoto E, et al. 2009. Application of real-time PCR assays to genotyping of F-specific phages in river water and sediments in Japan. Water Res.43:3759-3764.
-
(2009)
Water Res.
, vol.43
, pp. 3759-3764
-
-
Haramoto, E.1
-
13
-
-
84860447935
-
Performance criteria
-
Hagedorn C.I., Blanch AR, Harwood VJ (ed). Springer Science+Business Media, New York, NY
-
Harwood VJ, Stoeckel DM.2011. Performance criteria, p 7-30. In Hagedorn C.I., Blanch AR, Harwood VJ (ed), Microbial source tracking: methods, applications, and case studies. Springer Science+Business Media, New York, NY.
-
(2011)
Microbial source tracking: methods, applications, and case studies
, pp. 7-30
-
-
Harwood, V.J.1
Stoeckel, D.M.2
-
14
-
-
33750969083
-
Fabricating data: how substituting values for nondetects can ruin results, and what can be done about it
-
Helsel DR. 2006. Fabricating data: how substituting values for nondetects can ruin results, and what can be done about it. Chemosphere 65:2434-2439.
-
(2006)
Chemosphere
, vol.65
, pp. 2434-2439
-
-
Helsel, D.R.1
-
15
-
-
84866142815
-
Detection and enumeration of bacteriophages. Part 1: enumeration of F specific RNA bacteriophages
-
ISO.,Geneva, Switzerland
-
ISO. 1995. Detection and enumeration of bacteriophages. Part 1: enumeration of F specific RNA bacteriophages. ISO 10705-1. International Organization for Standardization, Geneva, Switzerland.
-
(1995)
ISO 10705-1. International Organization for Standardization
-
-
-
16
-
-
84870540180
-
Water quality- detection and enumeration of Escherichia coli and coliform bacteria. Part 3: miniaturized method (most probable number) for the detection and enumeration of E. coli in surface and waste water
-
ISO.,Geneva,Switzerland
-
ISO. 1998. Water quality- detection and enumeration of Escherichia coli and coliform bacteria. Part 3: miniaturized method (most probable number) for the detection and enumeration of E. coli in surface and waste water. ISO 9308-3. International Organization for Standardization, Geneva, Switzerland.
-
(1998)
ISO 9308-3. International Organization for Standardization
-
-
-
17
-
-
84870540180
-
Water quality-detection and enumeration of intestinal enterococci in surface and waste water. Part 1: miniaturized method (most probable number) for surface and waste water
-
ISO.,Geneva,Switzerland
-
ISO. 1998. Water quality-detection and enumeration of intestinal enterococci in surface and waste water. Part 1: miniaturized method (most probable number) for surface and waste water. ISO 7899-1. International Organization for Standardization, Geneva, Switzerland.
-
(1998)
ISO 7899-1. International Organization for Standardization
-
-
-
18
-
-
70449378470
-
Molecular characterization of bacteriophages for microbial source tracking in Korea
-
Lee JE, et al. 2009. Molecular characterization of bacteriophages for microbial source tracking in Korea. Appl. Environ. Microbiol. 75:7107-7114.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 7107-7114
-
-
Lee, J.E.1
-
20
-
-
84866181712
-
Molecular diagnosis of the fecal contamination origin in the environment-host-specific Bacteroidales markers development
-
University of Occidental Brittany, Brest, France
-
Mieszkin S. 2010. Molecular diagnosis of the fecal contamination origin in the environment host-specific Bacteroidales markers development.University of Occidental Brittany, Brest, France.
-
(2010)
-
-
Mieszkin, S.1
-
21
-
-
66249125965
-
Estimation of pig fecal contamination in a river catchment by real-time PCR using two pig-specific Bacteroidales 16S rRNA genetic markers
-
Mieszkin S, Furet JP, Corthier G, Gourmelon M. 2009. Estimation of pig fecal contamination in a river catchment by real-time PCR using two pig-specific Bacteroidales 16S rRNA genetic markers. Appl. Environ. Microbiol.75:3045-3054.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 3045-3054
-
-
Mieszkin, S.1
Furet, J.P.2
Corthier, G.3
Gourmelon, M.4
-
22
-
-
76449119604
-
Phylogenetic analysis of Bacteroidales 16S rRNA gene sequences from human and animal effluents and assessment of ruminant faecal pollution by real-time PCR
-
Mieszkin S, Yala JF, Joubrel R, Gourmelon M. 2010. Phylogenetic analysis of Bacteroidales 16S rRNA gene sequences from human and animal effluents and assessment of ruminant faecal pollution by real-time PCR. J. Appl. Microbiol. 108:974-984.
-
(2010)
J. Appl. Microbiol.
, vol.108
, pp. 974-984
-
-
Mieszkin, S.1
Yala, J.F.2
Joubrel, R.3
Gourmelon, M.4
-
23
-
-
0035724403
-
Validity of Escherichia coli, enterovirus and F specificRNAbacteriophages as indicators of viral shellfish contamination
-
Miossec L, et al. 2001. Validity of Escherichia coli, enterovirus and F specificRNAbacteriophages as indicators of viral shellfish contamination.J. Shellfish Res. 20:1223-1227.
-
(2001)
J. Shellfish Res.
, vol.20
, pp. 1223-1227
-
-
Miossec, L.1
-
24
-
-
79951946980
-
Integrated analysis of water quality parameters for cost-effective faecal pollution management in river catchments
-
Nnane DE, Ebdon JE, Taylor HD. 2011. Integrated analysis of water quality parameters for cost-effective faecal pollution management in river catchments. Water Res. 45:2235-2246.
-
(2011)
Water Res.
, vol.45
, pp. 2235-2246
-
-
Nnane, D.E.1
Ebdon, J.E.2
Taylor, H.D.3
-
25
-
-
61549096570
-
Relation-MST Markers at the Catchment Level ship between F-specific RNA phage genogroups, faecal pollution indicators and human adenoviruses in river water
-
Ogorzaly L, Tissier A, Bertrand I, Maul A, Gantzer C. 2009. Relation-MST Markers at the Catchment Level ship between F-specific RNA phage genogroups, faecal pollution indicators and human adenoviruses in river water. Water Res. 43:1257-Molecular diagnosis Molecular diagnosis 1264.
-
(2009)
Water Res.
, vol.43
, pp. 1257-1264
-
-
Ogorzaly, L.1
Tissier, A.2
Bertrand, I.3
Maul, A.4
Gantzer, C.5
-
26
-
-
34547494236
-
Monitoring source water for microbial contamination: evaluation of water quality measures
-
Plummer JD, Long SC. 2007. Monitoring source water for microbial contamination: evaluation of water quality measures. Water Res. 41:716-3728.
-
(2007)
Water Res.
, vol.41
, pp. 716-3728
-
-
Plummer, J.D.1
Long, S.C.2
-
27
-
-
33750942637
-
Fecal contamination in coastal areas: an engineering approach
-
Belkin S, Colwell RR (ed). Springer, New York, NY
-
Pommepuy M, et al. 2005. Fecal contamination in coastal areas: an engineering approach, p 331-359. In Belkin S, Colwell RR (ed), Oceans and health: pathogens in the marine environment. Springer, New York, NY.
-
(2005)
Oceans and health: pathogens in the marine environment
, pp. 331-359
-
-
Pommepuy, M.1
-
28
-
-
51649129269
-
Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics
-
Reischer GH, et al. 2008. Quantitative microbial faecal source tracking with sampling guided by hydrological catchment dynamics. Environ. Microbiol.10:2598-2608.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 2598-2608
-
-
Reischer, G.H.1
-
29
-
-
31244433792
-
Biomonitoring of contaminants in birds from two trophic levels in the North Pacific
-
Rocque DA, Winker K. 2004. Biomonitoring of contaminants in birds from two trophic levels in the North Pacific. Environ. Toxicol. Chem.23:759-766.
-
(2004)
Environ. Toxicol. Chem.
, vol.23
, pp. 759-766
-
-
Rocque, D.A.1
Winker, K.2
-
30
-
-
12744260019
-
Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater
-
Seurinck S, Defoirdt T, Verstraete W, Siciliano SD. 2005. Detection and quantification of the human-specific HF183 Bacteroides 16S rRNA genetic marker with real-time PCR for assessment of human faecal pollution in freshwater. Environ. Microbiol. 7:249-259.
-
(2005)
Environ. Microbiol.
, vol.7
, pp. 249-259
-
-
Seurinck, S.1
Defoirdt, T.2
Verstraete, W.3
Siciliano, S.D.4
-
31
-
-
33747359916
-
Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay
-
Shanks OC, et al. 2006. Basin-wide analysis of the dynamics of fecal contamination and fecal source identification in Tillamook Bay, Oregon. Appl. Environ. Microbiol. 72:5537-5546.
-
(2006)
Oregon. Appl. Environ. Microbiol.
, vol.72
, pp. 5537-5546
-
-
Shanks, O.C.1
-
32
-
-
79960555554
-
Persistence of microbial and chemical pig manure markers as compared to faecal indicator bacteria survival in freshwater and seawater microcosms
-
Solecki O, et al. 2011. Persistence of microbial and chemical pig manure markers as compared to faecal indicator bacteria survival in freshwater and seawater microcosms. Water Res. 45:4623-4633.
-
(2011)
Water Res.
, vol.45
, pp. 4623-4633
-
-
Solecki, O.1
-
33
-
-
71949083826
-
Evaluating the operational utility of a Bacteroidales quantitative PCR-based MST approach in determining the source of faecal indicator organisms at a UK bathing water
-
Stapleton CM, et al. 2009. Evaluating the operational utility of a Bacteroidales quantitative PCR-based MST approach in determining the source of faecal indicator organisms at a UK bathing water. Water Res. 43:4888-4899.
-
(2009)
Water Res.
, vol.43
, pp. 4888-4899
-
-
Stapleton, C.M.1
-
34
-
-
33750057648
-
F+RNA coliphage typing for microbial source tracking in surface waters
-
Stewart-Pullaro J, et al. 2006. F+RNA coliphage typing for microbial source tracking in surface waters. J. Appl. Microbiol. 101:1015-1026.
-
(2006)
J. Appl. Microbiol.
, vol.101
, pp. 1015-1026
-
-
Stewart-Pullaro, J.1
-
35
-
-
34247622189
-
Performance, design and analysis in microbial source tracking studies
-
Stoeckel DM, Harwood VJ. 2007. Performance, design and analysis in microbial source tracking studies. Appl. Environ. Microbiol. 73:1405-1415.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 1405-1415
-
-
Stoeckel, D.M.1
Harwood, V.J.2
-
36
-
-
71549140058
-
Evaluation of two spike-andrecovery controls for assessment of extraction efficiency in microbial source tracking studies
-
Stoeckel DM, Stelzer EA, Dick LK. 2009. Evaluation of two spike-andrecovery controls for assessment of extraction efficiency in microbial source tracking studies. Water Res. 43:4820-4827.
-
(2009)
Water Res.
, vol.43
, pp. 4820-4827
-
-
Stoeckel, D.M.1
Stelzer, E.A.2
Dick, L.K.3
-
37
-
-
77954698279
-
Unsuitability of quantitative Bacteroidales 16S rRNA gene assays for discerning fecal contamination of drinking water
-
van der Wielen PWJJ, Medema G. 2010. Unsuitability of quantitative Bacteroidales 16S rRNA gene assays for discerning fecal contamination of drinking water. Appl. Environ. Microbiol. 76:4876-4881.
-
(2010)
Appl. Environ. Microbiol.
, vol.76
, pp. 4876-4881
-
-
Pwjj, W.V.D.1
Medema, G.2
|