메뉴 건너뛰기




Volumn 72, Issue 9, 2006, Pages 5915-5926

Integrated analysis of established and novel microbial and chemical methods for microbial source tracking

Author keywords

[No Author keywords available]

Indexed keywords

INDICATORS (CHEMICAL); LEARNING SYSTEMS; RNA; SLURRIES; WASTEWATER TREATMENT;

EID: 33748772520     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.02453-05     Document Type: Article
Times cited : (143)

References (60)
  • 1
    • 23744453852 scopus 로고    scopus 로고
    • Host species-specific metabolic fingerprint database for enterococci and Escherichia coli and its application to identify sources of fecal contamination in surface waters
    • Ahmed, W., R. Neller, and M. Katouli. 2005. Host species-specific metabolic fingerprint database for enterococci and Escherichia coli and its application to identify sources of fecal contamination in surface waters. Appl. Environ. Microbiol. 71:4461-4468.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 4461-4468
    • Ahmed, W.1    Neller, R.2    Katouli, M.3
  • 2
    • 0002351436 scopus 로고
    • Use of microbial diversity measurements to assess environmental stress
    • M. J. Klug and C. A. Reddy (ed.). American Society for Microbiology, Washington, D.C.
    • Atlas, R. M. 1984. Use of microbial diversity measurements to assess environmental stress, p. 540-545. In M. J. Klug and C. A. Reddy (ed.), Current perspectives in microbial ecology. American Society for Microbiology, Washington, D.C.
    • (1984) Current Perspectives in Microbial Ecology , pp. 540-545
    • Atlas, R.M.1
  • 3
    • 0030047443 scopus 로고    scopus 로고
    • An oligonucleotide hybridization assay for the identification and enumeration of F-specific RNA phages in surface waters
    • Beelwilder, J., R. Niewenhuizen, A. H. Havelaar, and J. van Duin. 1996. An oligonucleotide hybridization assay for the identification and enumeration of F-specific RNA phages in surface waters. J. Appl. Bacteriol. 80:179-186.
    • (1996) J. Appl. Bacteriol. , vol.80 , pp. 179-186
    • Beelwilder, J.1    Niewenhuizen, R.2    Havelaar, A.H.3    Van Duin, J.4
  • 4
    • 0002723031 scopus 로고
    • Statistical sampling of bacterial strains and its use in bacterial diversity measurement
    • Bianchi, M. A. G., and A. J. M. Bianchi. 1982. Statistical sampling of bacterial strains and its use in bacterial diversity measurement. Microb. Ecol. 8:61-69.
    • (1982) Microb. Ecol. , vol.8 , pp. 61-69
    • Bianchi, M.A.G.1    Bianchi, A.J.M.2
  • 5
    • 0038696354 scopus 로고    scopus 로고
    • Comparison of enterococcal populations related to urban and hospital wastewater in various climatic and geographic European regions
    • Blanch, A. R., J. L. Caplin, A. Iversen, I. Kühn, A. Manero, H. D. Taylor, and X. Vilanova. 2003. Comparison of enterococcal populations related to urban and hospital wastewater in various climatic and geographic European regions. J. Appl. Microbiol. 94:994-1002.
    • (2003) J. Appl. Microbiol. , vol.94 , pp. 994-1002
    • Blanch, A.R.1    Caplin, J.L.2    Iversen, A.3    Kühn, I.4    Manero, A.5    Taylor, H.D.6    Vilanova, X.7
  • 7
    • 2442644318 scopus 로고    scopus 로고
    • Multiplex PCR with 16S rRNA gene-targeted primers of Bifidobacterium spp. to identify sources of fecal pollution
    • Bonjoch, X., E. Ballesté, and A. R. Blanch. 2004. Multiplex PCR with 16S rRNA gene-targeted primers of Bifidobacterium spp. to identify sources of fecal pollution. Appl. Environ. Microbiol. 70:3171-3175.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 3171-3175
    • Bonjoch, X.1    Ballesté, E.2    Blanch, A.R.3
  • 8
    • 18244371906 scopus 로고    scopus 로고
    • Enumeration of bifidobacterial populations with selective media to determine the source of waterborne faecal pollution
    • Bonjoch, X., E. Ballesté, and A. R. Blanch. 2005. Enumeration of bifidobacterial populations with selective media to determine the source of waterborne faecal pollution. Water Res. 39:1621-1627.
    • (2005) Water Res. , vol.39 , pp. 1621-1627
    • Bonjoch, X.1    Ballesté, E.2    Blanch, A.R.3
  • 9
    • 0036741941 scopus 로고    scopus 로고
    • A neural-network-based classification scheme for sorting sources and ages of fecal contamination in water
    • Brion, G. M., T. R. Neelakantan, and S. Lingireddy. 2002. A neural-network-based classification scheme for sorting sources and ages of fecal contamination in water. Water Res. 36:3765-3774.
    • (2002) Water Res. , vol.36 , pp. 3765-3774
    • Brion, G.M.1    Neelakantan, T.R.2    Lingireddy, S.3
  • 10
    • 0037337209 scopus 로고    scopus 로고
    • Comparison of ribotyping and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals
    • Carson, C. A., B. L. Shear, M. R. Ellersieck, and J. D. Schnell. 2003. Comparison of ribotyping and repetitive extragenic palindromic-PCR for identification of fecal Escherichia coli from humans and animals. Appl. Environ. Microbiol. 69:1836-1839.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1836-1839
    • Carson, C.A.1    Shear, B.L.2    Ellersieck, M.R.3    Schnell, J.D.4
  • 12
    • 0242489236 scopus 로고    scopus 로고
    • Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
    • Cole, D., S. C. Long, and M. D. Sobsey. 2003. Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl. Environ. Microbiol. 69:6507-6514.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 6507-6514
    • Cole, D.1    Long, S.C.2    Sobsey, M.D.3
  • 13
    • 0034130242 scopus 로고    scopus 로고
    • Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources
    • Dombeck, P. E., L. K. Johson, S. J. Zimmerley, and M. J. Sadowsky. 2000. Use of repetitive DNA sequences and the PCR to differentiate Escherichia coli isolates from human and animal sources. Appl. Environ. Microbiol. 66:2572-2577.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 2572-2577
    • Dombeck, P.E.1    Johson, L.K.2    Zimmerley, S.J.3    Sadowsky, M.J.4
  • 15
    • 0347928647 scopus 로고    scopus 로고
    • Molecular approaches to microbiological monitoring: Fecal source detection
    • Field, K. G., A. E. Bernhard, and T. J. Brodeur. 2003. Molecular approaches to microbiological monitoring: fecal source detection. Environ. Monit. Assess. 81:313-326.
    • (2003) Environ. Monit. Assess. , vol.81 , pp. 313-326
    • Field, K.G.1    Bernhard, A.E.2    Brodeur, T.J.3
  • 16
    • 0023179996 scopus 로고
    • Functional genes for cellobiose utilization in natural isolates of Escherichia coli
    • Hall, B. G., and W. Faunce. 1987. Functional genes for cellobiose utilization in natural isolates of Escherichia coli. J. Bacteriol. 169:2713-2717.
    • (1987) J. Bacteriol. , vol.169 , pp. 2713-2717
    • Hall, B.G.1    Faunce, W.2
  • 17
    • 0033831590 scopus 로고    scopus 로고
    • Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: Use in predicting the source of fecal contamination in subtropical waters
    • Harwood, V. J., J. Whitlock, and V. Withington. 2000. Classification of antibiotic resistance patterns of indicator bacteria by discriminant analysis: use in predicting the source of fecal contamination in subtropical waters. Appl. Environ. Microbiol. 66:3698-3704.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 3698-3704
    • Harwood, V.J.1    Whitlock, J.2    Withington, V.3
  • 19
    • 0023738045 scopus 로고
    • Numerical index of the discriminatory ability of typing systems: An application of Simpson's index of diversity
    • Hunter, P. R., and M. A. Gaston. 1988. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J. Clin. Microbiol. 26:2465-2466.
    • (1988) J. Clin. Microbiol. , vol.26 , pp. 2465-2466
    • Hunter, P.R.1    Gaston, M.A.2
  • 21
    • 33748495665 scopus 로고
    • ISO 5667-2. International Standardisation Organisation, Geneva, Switzerland
    • International Standardisation Organisation. 1982. Water quality. Sampling. Part 2. Guidance on sampling techniques. ISO 5667-2. International Standardisation Organisation, Geneva, Switzerland.
    • (1982) Water Quality. Sampling. Part 2. Guidance on Sampling Techniques
  • 26
    • 0003865539 scopus 로고
    • ISO 31-0. International Standardisation Organisation, Geneva, Switzerland
    • International Standardisation Organisation. 1992. Quantities and units. Part 0. General principles. ISO 31-0. International Standardisation Organisation, Geneva, Switzerland.
    • (1992) Quantities and Units. Part 0. General Principles
  • 32
    • 0031381525 scopus 로고    scopus 로고
    • Wrappers for feature subset selection
    • Kohavi, R., and G. H. John. 1997. Wrappers for feature subset selection, Artif. Intell. 97:273-324.
    • (1997) Artif. Intell. , vol.97 , pp. 273-324
    • Kohavi, R.1    John, G.H.2
  • 33
    • 0021799785 scopus 로고
    • Biochemical fingerprinting of Escherichia coli: A simple method for epidemiological investigations
    • Kühn, I. 1985. Biochemical fingerprinting of Escherichia coli: a simple method for epidemiological investigations. J. Microbiol. Methods 3:159-170.
    • (1985) J. Microbiol. Methods , vol.3 , pp. 159-170
    • Kühn, I.1
  • 35
    • 1842368506 scopus 로고    scopus 로고
    • Biochemical fingerprinting of coliform bacterial populations-comparisons between polluted river water and factory effluents
    • Kühn, I., G. Allestam, M. Engdahl, and T. A. Stenstrom. 1997. Biochemical fingerprinting of coliform bacterial populations-comparisons between polluted river water and factory effluents. Water Sci. Technol. 35:343-350.
    • (1997) Water Sci. Technol. , vol.35 , pp. 343-350
    • Kühn, I.1    Allestam, G.2    Engdahl, M.3    Stenstrom, T.A.4
  • 36
    • 0026001111 scopus 로고
    • Biochemical fingerprinting of water coliform bacteria, a new method for measuring phenotypic diversity and for comparing different bacterial populations
    • Kühn, I., G. Allestam, T. A. Stenstrom, and R. Möllby. 1991. Biochemical fingerprinting of water coliform bacteria, a new method for measuring phenotypic diversity and for comparing different bacterial populations. Appl. Environ. Microbiol. 57:3171-3177.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 3171-3177
    • Kühn, I.1    Allestam, G.2    Stenstrom, T.A.3    Möllby, R.4
  • 37
    • 0030456951 scopus 로고    scopus 로고
    • Using faecal sterols from humans and animals to distinguish faecal pollution in receiving waters
    • Leeming, R., A. Ball, N. Ashbolt, and P. D. Nichols. 1996. Using faecal sterols from humans and animals to distinguish faecal pollution in receiving waters. Water Res. 30:2893-2900.
    • (1996) Water Res. , vol.30 , pp. 2893-2900
    • Leeming, R.1    Ball, A.2    Ashbolt, N.3    Nichols, P.D.4
  • 40
    • 0037192525 scopus 로고    scopus 로고
    • Microbiologists on the trail of polluting bacteria
    • Malakoff, D. 2002. Microbiologists on the trail of polluting bacteria. Science 295:2352-2353.
    • (2002) Science , vol.295 , pp. 2352-2353
    • Malakoff, D.1
  • 41
    • 0032880242 scopus 로고    scopus 로고
    • Identification of Enterococcus spp. with a biochemical key
    • Manero, A., and A. R. Blanch. 1999. Identification of Enterococcus spp. with a biochemical key. Appl. Environ. Microbiol. 65:4425-4430.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4425-4430
    • Manero, A.1    Blanch, A.R.2
  • 42
    • 0021036293 scopus 로고
    • Sorbitol-fermenting bifidobacteria as specific indicators of human faecal pollution
    • Mara, D. D., and J. I. Oragui. 1983. Sorbitol-fermenting bifidobacteria as specific indicators of human faecal pollution. J. Appl. Bacteriol. 55:349-357.
    • (1983) J. Appl. Bacteriol. , vol.55 , pp. 349-357
    • Mara, D.D.1    Oragui, J.I.2
  • 43
    • 13544249833 scopus 로고    scopus 로고
    • Use of eukaryotic mitochondrial DNA to differentiate human, bovine, porcine and ovine sources in fecally contaminated surface water
    • Martellini, A., P. Payment, and R. Villemur. 2005. Use of eukaryotic mitochondrial DNA to differentiate human, bovine, porcine and ovine sources in fecally contaminated surface water. Water Res. 39:541-548.
    • (2005) Water Res. , vol.39 , pp. 541-548
    • Martellini, A.1    Payment, P.2    Villemur, R.3
  • 44
    • 0032878580 scopus 로고    scopus 로고
    • Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers
    • Matsuki, T., K. Watanabe, R. Tanaka, M. Fukuda, and H. Oyaizu. 1999. Distribution of bifidobacterial species in human intestinal microflora examined with 16S rRNA-gene-targeted species-specific primers. Appl. Environ. Microbiol. 65:4506-4512.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4506-4512
    • Matsuki, T.1    Watanabe, K.2    Tanaka, R.3    Fukuda, M.4    Oyaizu, H.5
  • 45
    • 0004255908 scopus 로고    scopus 로고
    • McGraw-Hill Higher Education, New York, N.Y.
    • Mitchell, M. 1997. Machine learning, p. 414. McGraw-Hill Higher Education, New York, N.Y.
    • (1997) Machine Learning , pp. 414
    • Mitchell, M.1
  • 47
    • 2942610631 scopus 로고    scopus 로고
    • Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study
    • Noble, R., S. Allen, A. Blackwood, W. Chu, S. Jiang, G. Lovelace, M. Sobsey, J. Stewart, and D. Wait. 2003. Use of viral pathogens and indicators to differentiate between human and non-human fecal contamination in a microbial source tracking comparison study. J. Water Health 1:195-207.
    • (2003) J. Water Health , vol.1 , pp. 195-207
    • Noble, R.1    Allen, S.2    Blackwood, A.3    Chu, W.4    Jiang, S.5    Lovelace, G.6    Sobsey, M.7    Stewart, J.8    Wait, D.9
  • 48
    • 0032974775 scopus 로고    scopus 로고
    • Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution
    • Parveen, S., K. M. Portier, K. Robinson, L. Edmiston, and M. L. Tamplin. 1999. Discriminant analysis of ribotype profiles of Escherichia coli for differentiating human and nonhuman sources of fecal pollution. Appl. Environ. Microbiol. 65:3142-3147.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3142-3147
    • Parveen, S.1    Portier, K.M.2    Robinson, K.3    Edmiston, L.4    Tamplin, M.L.5
  • 50
    • 0032942011 scopus 로고    scopus 로고
    • Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from fecally polluted wastewater
    • Puig, A., N. Queralt, J. Jofre, and R. Araujo. 1999. Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from fecally polluted wastewater. Appl. Environ. Microbiol. 65:1772-1776.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1772-1776
    • Puig, A.1    Queralt, N.2    Jofre, J.3    Araujo, R.4
  • 52
    • 0033833665 scopus 로고    scopus 로고
    • Comparison of methods for detecting genotypes of F-specific RNA bacteriophages and fingerprinting the origin of faecal pollution in water samples
    • Schaper, M., and J. Jofre. 2000. Comparison of methods for detecting genotypes of F-specific RNA bacteriophages and fingerprinting the origin of faecal pollution in water samples. J. Virol. Methods 89:1-10.
    • (2000) J. Virol. Methods , vol.89 , pp. 1-10
    • Schaper, M.1    Jofre, J.2
  • 53
    • 0036232982 scopus 로고    scopus 로고
    • Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain
    • Schaper, M., J. Jofre, M. Uys, and W. O. K. Grabow. 2002. Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain. J. Appl. Microbiol. 92:3605-3613.
    • (2002) J. Appl. Microbiol. , vol.92 , pp. 3605-3613
    • Schaper, M.1    Jofre, J.2    Uys, M.3    Grabow, W.O.K.4
  • 57
    • 0036804458 scopus 로고    scopus 로고
    • Identification of the sources of fecal coliforms in an urban watershed using antibiotic resistance analysis
    • Whitlock, J. E., D. T. Jones, and V. J. Hanwood. 2002. Identification of the sources of fecal coliforms in an urban watershed using antibiotic resistance analysis. Water Res. 36:4273-4282.
    • (2002) Water Res. , vol.36 , pp. 4273-4282
    • Whitlock, J.E.1    Jones, D.T.2    Hanwood, V.J.3
  • 58
    • 0029659598 scopus 로고    scopus 로고
    • Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters
    • Wiggins, B. A. 1996. Discriminant analysis of antibiotic resistance patterns in fecal streptococci, a method to differentiate human and animal sources of fecal pollution in natural waters. Appl. Environ. Microbiol. 62:3997-4002.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 3997-4002
    • Wiggins, B.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.