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Volumn 43, Issue 15, 2009, Pages 3759-3764

Application of real-time PCR assays to genotyping of F-specific phages in river water and sediments in Japan

Author keywords

F specific phage; Genotyping; Human adenovirus; Public health; River water; Sediment

Indexed keywords

ANIMALS; ASSAYS; BACTERIOPHAGES; POLYMERASE CHAIN REACTION; RIVERS; RNA;

EID: 67651123112     PISSN: 00431354     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.watres.2009.05.043     Document Type: Article
Times cited : (26)

References (24)
  • 3
    • 0242489236 scopus 로고    scopus 로고
    • Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters
    • Cole D., Long S.C., and Sobsey M.D. Evaluation of F+ RNA and DNA coliphages as source-specific indicators of fecal contamination in surface waters. Appl. Environ. Microbiol. 69 (2003) 6507-6514
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 6507-6514
    • Cole, D.1    Long, S.C.2    Sobsey, M.D.3
  • 5
    • 34547754433 scopus 로고    scopus 로고
    • Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries
    • Gourmelon M., Caprais M.P., Ségura R., Le Mennec C., Lozach S., Piriou J.Y., and Rincé A. Evaluation of two library-independent microbial source tracking methods to identify sources of fecal contamination in French estuaries. Appl. Environ. Microbiol. 73 (2007) 4857-4866
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 4857-4866
    • Gourmelon, M.1    Caprais, M.P.2    Ségura, R.3    Le Mennec, C.4    Lozach, S.5    Piriou, J.Y.6    Rincé, A.7
  • 6
    • 65549131861 scopus 로고    scopus 로고
    • Detection of human viruses in rivers of a densly-populated area in Germany using a virus adsorption elution method optimized for PCR analyses
    • Hamza I., Jurzik A.L., Stang A., Sure K., Überla K., and Wilhelm M. Detection of human viruses in rivers of a densly-populated area in Germany using a virus adsorption elution method optimized for PCR analyses. Water Res. 43 (2009) 2657-2668
    • (2009) Water Res. , vol.43 , pp. 2657-2668
    • Hamza, I.1    Jurzik, A.L.2    Stang, A.3    Sure, K.4    Überla, K.5    Wilhelm, M.6
  • 7
    • 18444382958 scopus 로고    scopus 로고
    • Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan
    • Haramoto E., Katayama H., Oguma K., and Ohgaki S. Application of cation-coated filter method to detection of noroviruses, enteroviruses, adenoviruses, and torque teno viruses in the Tamagawa River in Japan. Appl. Environ. Microbiol. 71 (2005) 2403-2411
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 2403-2411
    • Haramoto, E.1    Katayama, H.2    Oguma, K.3    Ohgaki, S.4
  • 8
    • 36549065268 scopus 로고    scopus 로고
    • Quantitative analysis of human enteric adenoviruses in aquatic environments
    • Haramoto E., Katayama H., Oguma K., and Ohgaki S. Quantitative analysis of human enteric adenoviruses in aquatic environments. J. Appl. Microbiol. 103 (2007) 2153-2159
    • (2007) J. Appl. Microbiol. , vol.103 , pp. 2153-2159
    • Haramoto, E.1    Katayama, H.2    Oguma, K.3    Ohgaki, S.4
  • 9
    • 33845341846 scopus 로고    scopus 로고
    • Human adenoviruses in water: occurrence and health implications: a critical review
    • Jiang S.C. Human adenoviruses in water: occurrence and health implications: a critical review. Environ. Sci. Technol. 40 (2006) 7132-7140
    • (2006) Environ. Sci. Technol. , vol.40 , pp. 7132-7140
    • Jiang, S.C.1
  • 10
    • 85010369550 scopus 로고    scopus 로고
    • Development and evaluation of a multiplexed real-time TaqMan RT-PCR assay with a sample process control for detection of F-specific RNA coliphage genogroups I and IV
    • Jones T.H., Houde A., Poitras E., Ward P., and Johns M.W. Development and evaluation of a multiplexed real-time TaqMan RT-PCR assay with a sample process control for detection of F-specific RNA coliphage genogroups I and IV. Food Environ. Virol. 1 (2009) 57-65
    • (2009) Food Environ. Virol. , vol.1 , pp. 57-65
    • Jones, T.H.1    Houde, A.2    Poitras, E.3    Ward, P.4    Johns, M.W.5
  • 11
    • 0036196006 scopus 로고    scopus 로고
    • Development of a virus concentration method and its application to detection of enterovirus and Norwalk virus from coastal seawater
    • Katayama H., Shimasaki A., and Ohgaki S. Development of a virus concentration method and its application to detection of enterovirus and Norwalk virus from coastal seawater. Appl. Environ. Microbiol. 68 (2002) 1033-1039
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1033-1039
    • Katayama, H.1    Shimasaki, A.2    Ohgaki, S.3
  • 12
    • 20444450075 scopus 로고    scopus 로고
    • Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR
    • Ko G., Jothikumar N., Hill V.R., and Sobsey M.D. Rapid detection of infectious adenoviruses by mRNA real-time RT-PCR. J. Virol. Methods 127 (2005) 148-153
    • (2005) J. Virol. Methods , vol.127 , pp. 148-153
    • Ko, G.1    Jothikumar, N.2    Hill, V.R.3    Sobsey, M.D.4
  • 15
    • 33751025735 scopus 로고    scopus 로고
    • Development of real-time RT-PCR methods for specific detection of F-specific RNA bacteriophage genogroups: application to urban raw wastewater
    • Ogorzaly L., and Gantzer C. Development of real-time RT-PCR methods for specific detection of F-specific RNA bacteriophage genogroups: application to urban raw wastewater. J. Virol. Methods 138 (2006) 131-139
    • (2006) J. Virol. Methods , vol.138 , pp. 131-139
    • Ogorzaly, L.1    Gantzer, C.2
  • 16
    • 34249717782 scopus 로고    scopus 로고
    • Erratum to Development of real-time RT-PCR methods for specific detection of F-specific RNA bacteriophage genogroups: application to urban raw wastewater
    • [J. Virol. Methods 138 (2006) 131-139]
    • Ogorzaly L., and Gantzer C. Erratum to Development of real-time RT-PCR methods for specific detection of F-specific RNA bacteriophage genogroups: application to urban raw wastewater. [J. Virol. Methods 138 (2006) 131-139]. J. Virol. Methods. 143 (2007) 122
    • (2007) J. Virol. Methods. , vol.143 , pp. 122
    • Ogorzaly, L.1    Gantzer, C.2
  • 17
    • 61549096570 scopus 로고    scopus 로고
    • Relationship between F-specific RNA phage genogroups, faecal pollution indicators and human adenoviruses in river water
    • Ogorzaly L., Tissier A., Bertrand I., Maul A., and Gantzer C. Relationship between F-specific RNA phage genogroups, faecal pollution indicators and human adenoviruses in river water. Water Res. 43 (2009) 1257-1264
    • (2009) Water Res. , vol.43 , pp. 1257-1264
    • Ogorzaly, L.1    Tissier, A.2    Bertrand, I.3    Maul, A.4    Gantzer, C.5
  • 18
    • 0036330258 scopus 로고    scopus 로고
    • Comparative resistance of phage isolates of four genotypes of F-specific RNA bacteriophages to various inactivation processes
    • Schaper M., Durán A.E., and Jofre J. Comparative resistance of phage isolates of four genotypes of F-specific RNA bacteriophages to various inactivation processes. Appl. Environ. Microbiol. 68 (2002) 3702-3707
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 3702-3707
    • Schaper, M.1    Durán, A.E.2    Jofre, J.3
  • 19
    • 0036232982 scopus 로고    scopus 로고
    • Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain
    • Schaper M., Jofre J., Uys M., and Grabow W.O.K. Distribution of genotypes of F-specific RNA bacteriophages in human and non-human sources of faecal pollution in South Africa and Spain. J. Appl. Microbiol. 92 (2002) 657-667
    • (2002) J. Appl. Microbiol. , vol.92 , pp. 657-667
    • Schaper, M.1    Jofre, J.2    Uys, M.3    Grabow, W.O.K.4
  • 20
    • 0032812082 scopus 로고    scopus 로고
    • Sunlight inactivation of fecal bacteriophages and bacteria in sewage-polluted seawater
    • Sinton L.W., Finlay R.K., and Lynch P.A. Sunlight inactivation of fecal bacteriophages and bacteria in sewage-polluted seawater. Appl. Environ. Microbiol. 65 (1999) 3605-3613
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3605-3613
    • Sinton, L.W.1    Finlay, R.K.2    Lynch, P.A.3
  • 22
    • 8144224232 scopus 로고    scopus 로고
    • Molecular detection and genotyping of male-specific coliphages by reverse transcription-PCR and reverse line blot hybridization
    • Vinjé J., Oudejans S.J.G., Stewart J.R., Sobsey M.D., and Long S.C. Molecular detection and genotyping of male-specific coliphages by reverse transcription-PCR and reverse line blot hybridization. Appl. Environ. Microbiol. 70 (2004) 5996-6004
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 5996-6004
    • Vinjé, J.1    Oudejans, S.J.G.2    Stewart, J.R.3    Sobsey, M.D.4    Long, S.C.5
  • 23
    • 40849112910 scopus 로고    scopus 로고
    • Detection and characterization of F+ RNA bacteriophages in water and shellfish: application of a multiplex real-time reverse transcription PCR
    • Wolf S., Hewitt J., Rivera-Aban M., and Greening G.E. Detection and characterization of F+ RNA bacteriophages in water and shellfish: application of a multiplex real-time reverse transcription PCR. J. Virol. Methods 149 (2008) 123-128
    • (2008) J. Virol. Methods , vol.149 , pp. 123-128
    • Wolf, S.1    Hewitt, J.2    Rivera-Aban, M.3    Greening, G.E.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.