Mapping directionality specific volume changes using tensor based morphometry: An application to the study of gyrogenesis and lateralization of the human fetal brain

NeuroImage

Volumn 63, Issue 2, 2012, Pages 947-958

  Rajagopalan, Vidya ^a,c,d   Scott, Julia ^a,c,d   Habas, Piotr A ^a,c,d   Kim, Kio ^a,c,d   Rousseau, Francois ^b   Glenn, Orit A ^a   Barkovich, A James ^a   Studholme, Colin ^a,c,d  

^a UNIVERSITY OF WASHINGTON SCHOOL OF MEDICINE   (United States)

^b University of Washington   (United States)

^c UNIVERSITÉ DE STRASBOURG   (France)

^d UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Brain development; Directional growth modeling; Fetal imaging; Structural MRI; Tensor based morphometry

Indexed keywords

ANISOTROPY; ARTICLE; BRAIN ASYMMETRY; BRAIN DEVELOPMENT; BRAIN MAPPING; BRAIN REGION; BRAIN SIZE; BRAIN SLICE; FEMALE; FETUS; FETUS DEVELOPMENT; HEMISPHERIC DOMINANCE; HUMAN; HUMAN TISSUE; IMAGE QUALITY; IN VIVO STUDY; MALE; MATHEMATICAL MODEL; MORPHOMETRICS; NEUROIMAGING; NUCLEAR MAGNETIC RESONANCE IMAGING; PRIORITY JOURNAL; STRUCTURE ANALYSIS; SUPRASYLVIAN GYRUS; TENSOR BASED MORPHOMETRY;

BRAIN; BRAIN MAPPING; DIFFUSION TENSOR IMAGING; FETUS; FUNCTIONAL LATERALITY; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED;

EID: 84866173508     PISSN: 10538119     EISSN: 10959572     Source Type: Journal    
DOI: 10.1016/j.neuroimage.2012.03.092     Document Type: Article

References (48)

1. Afif A., Bouvier R., Buenerd A., Trouillas J., Mertens P. Development of the human fetal insular cortex: study of the gyration from 13 to 28 gestational weeks. Brain Struct. Funct. 2007, 212(3-4):335-346.
2. Aljabar P., Bhatia K.K., Murgasova M., Hajnal J.V., Boardman J.P., Srinivasan L., Rutherford M.A., Dyet L.E., Edwards A.D., Rueckert D. Assessment of brain growth in early childhood using deformation-based morphometry. Neuroimage 2008, 39(1):348-358.
3. Armstrong E., Schleicher A., Omran H., Curtis M., Zilles K. The ontogeny of human gyrification. Cereb. Cortex 1995, 5(1):56-63.
4. Ashburner J., Hutton C., Frackowiak R., Johnsrude I., Price C., Friston K. Identifying global anatomical differences: deformation-based morphometry. Hum. Brain Mapp. 1998, 6(5-6):348-357.
5. Batchelor P., Castellano Smith A., Hill D., Hawkes D., Cox T., Dean A. Measures of folding applied to the development of the human fetal brain. IEEE Trans. Med. Imaging 2002, 21(8):953-965.
6. Chi J., Dooling E., Gilles F. Gyral development of human brain. Ann. Neurol. 1977, 1(1):86-93.
7. Davatzikos C., Vaillant M., Resnick S., Prince J., Letovsky S., Bryan R. A computerized approach for morphological analysis of the corpus callosum. J. Comput. Assist. Tomogr. 1996, 20(1):88-97.
8. De Souza Neto E., Peric D., Owen D. Computational methods for plasticity: theory and applications 2008, Wiley.
9. Dubois J., Benders M., Cachia A., Lazeyras F., Ha-Vinh Leuchter R., Sizonenko S., Borradori-Tolsa C., Mangin J., Huppi P. Mapping the early cortical folding process in the preterm newborn brain. Cereb. Cortex 2008, 18(6):1444-1454.
10. Fisher R. Statistical Methods for Research Workers 1932, Oliver and Boyd.
11. Gogtay N., Giedd J., Lusk L., Hayashi K., Greenstein D., Vaituzis A., Nugent T., Herman D., Clasen L., Toga A., Rapoport J., Thompson P. Dynamic mapping of human cortical development during childhood through early adulthood. Proc. Natl. Acad. Sci. U. S. A. 2004, 101(21):8174-8179.
12. Golub G., Van Loan C. Matrix Computations (Johns Hopkins Studies in Mathematical Sciences) 1996, The Johns Hopkins University Press. 3rd ed.
13. Grossman R., Hoffman C., Mardor Y., Biegon A. Quantitative MRI measurements of human fetal brain development in utero. Neuroimage 2006, 33(2):463-470.
14. Habas P.A., Kim K., Corbett-Detig J.M., Rousseau F., Glenn O.A., Barkovich A.J., Studholme C. A spatiotemporal atlas of MR intensity, tissue probability and shape of the fetal brain with application to segmentation. Neuroimage 2010, 53(2):460-470.
15. Habas P.A., Kim K., Rousseau F., Glenn O.A., Barkovich A.J., Studholme C. Atlas-based segmentation of developing tissues in the human brain with quantitative validation in young fetuses. Hum. Brain Mapp. 2010, 31(9):1348-1358.
16. Habas P.A., Scott J.A., Roosta A., Rajagopalan V., Kim K., Rousseau F., Barkovich A.J., Glenn O.A., Studholme C. Early folding patterns and asymmetries of the normal human brain detected from in utero MRI. Cereb. Cortex. 2012, 22(1):13-25.
17. Hilgetag C.C., Barbas H. Role of mechanical factors in the morphology of the primate cerebral cortex. PLoS Comput. Biol. 2006, 2(3):e22.
18. Hill J., Inder T., Neil J., Dierker D., Harwell J., Van Essen D. Similar patterns of cortical expansion during human development and evolution. Proc. Natl. Acad. Sci. U. S. A. 2010, 107(29):13135-13140.
19. Humphrey T. The development of the human hippocampal fissure. J. Anat. 1967, 101:655-676.
20. Kier E., Kim J., Fulbright R., Bronen R. Embryology of the human fetal hippocampus: MR imaging, anatomy, and histology. Am. J. Neuroradiol. 1997, 18:525-532.
21. Kim K., Habas P.A., Rousseau F., Glenn O.A., Barkovich A.J., Studholme C. Intersection based motion correction of multislice MRI for 3-D in utero fetal brain image formation. IEEE Trans. Med. Imaging 2010, 29(1):146-158.
22. Kochunov P., Castro C., Davis D., Dudley D., Brewer J., Zhang Y., Kroenke C., Purdy D., Fox P., Simerly C. Mapping primary gyrogenesis during fetal development in primate brains: high-resolution in utero structural MRI of fetal brain development in pregnant baboons. Front. Neurosci. 2010, 4(3):20.
23. Lancaster J., Kochunov P., Thompson P., Toga A., Fox P. Asymmetry of the brain surface from deformation field analysis. Hum. Brain Mapp. 2003, 19(2):79-89.
24. Lee J., Fonov V., Evans A. Mapping brain growth of early childhood using deformation based morphometry. Neuroimage 2009, 47(Supplement 1):S153.
25. LeMay M. Morphological cerebral asymmetries of modern man, fossil man, and nonhuman primate. Ann. N. Y. Acad. Sci. 1976, 280:349-366.
26. Lenroot R.K., Gogtay N., Greenstein D.K., Wells E.M., Wallace G.L., Clasen L.S., Blumenthal J.D., Lerch J., Zijdenbos A.P., Evans A.C., Thompson P.M., Giedd J.N. Sexual dimorphism of brain developmental trajectories during childhood and adolescence. Neuroimage 2007, 36(4):1065-1073.
27. Lepore N., Brun C.A., Chou Y.-Y., Chiang M.-C., Dutton R.A., Hayashi K.M., Luders E., Lopez O.L., Aizenstein H., Toga A.W., Becker J.T., Thompson P.M. Generalized tensor-based morphometry of HIV/AIDS using multivariate statistics on deformation tensors. IEEE Trans. Med. Imaging 2008, 27(1):129-141.
28. Lund U. Least circular distance regression for directional data. J. Appl. Stat. 1999, 26(6):723-733.
29. Modersitzki J. Numerical Methods for Image Registration 2004, Oxford University Press.
30. Nichols T., Holmes A. Nonparametric permutation tests for functional neuroimaging: a primer with examples. Hum. Brain Mapp. 2002, 15:1-25.
31. Noll W., Truesdell C. The Non-linear Field Theories of Mechanics 1965, Springer-Verlag.
32. Quarello E., Stirnemann J., Ville Y., Guibaud L. Assessment of fetal Sylvian fissure operculization between 22 and 32weeks: a subjective approach. Ultrasound Obstet. Gynecol. 2008, 32(1):44-49.
33. Rajagopalan V., Scott J., Habas P., Kim K., Rousseau F., Glenn O., Barkovich A., Studholme C. Measures for characterizing directionality specific volume changes in TBM of brain growth. Medical Image Computing and Computer Assisted Intervention 2010, 339-346. 6362 (2).
34. Rajagopalan V., Scott J.A., Habas P.A., Corbett-Detig J.M., Kim K., Rousseau F., Barkovich A.J., Glenn O.A., Studholme C. Local tissue growth patterns underlying normal fetal human brain gyrification quantified in utero. J. Neurosci. 2011, 31:2878-2887.
35. Scott J.A., Habas P.A., Kim K., Rajagopalan V., Hamzelou K.S., Corbett-Detig J.M., Barkovich A.J., Glenn O.A., Studholme C. Growth trajectories of the human fetal brain tissues estimated from 3d reconstructed in utero MRI. Int. J. Dev. Neurosci. 2011, 29(5):529-536.
36. Smart I.H., McSherry G.M. Gyrus formation in the cerebral cortex in the ferret. I. Description of the external changes. J. Anat. 1986, 146:141-152.
37. Studholme C. Dense feature deformation morphometry: incorporating DTI data into conventional MRI morphometry. Med. Image Anal. 2008, 12(6):742-751.
38. Studholme C. Mapping fetal brain development in utero using magnetic resonance imaging: the big bang of brain mapping. Annu. Rev. Biomed. Eng. 2011, 13:345-368.
39. Studholme C., Cardenas V. Population based analysis of directional information in serial deformation tensor morphometry. Medical Image Computing and Computer Assisted Intervention 2007, 311-318.
40. Studholme C., Hill D.L.G., Hawkes D.J. An overlap invariant entropy measure of 3D medical image alignment. Pattern Recognit. 1999, 32(1):71-86.
41. Studholme C., Cardenas V., Schuff N., Rosen H., Miller B., Weiner M. Detecting spatially consistent structural differences in Alzheimer's and fronto temporal dementia using deformation morphometry. Medical Image Computing and Computer Assisted Intervention 2001, 41-48.
42. Thirion J. Image matching as a diffusion process: an analogy with Maxwell's demons. Med. Image Anal. 1998, 2(3):243-260.
43. Thompson P.M., Giedd J.N., Woods R.P., MacDonald D., Evans A.C., Toga A.W. Growth patterns in the developing brain detected by using continuum mechanical tensor maps. Nature 2000, 404(6774):190-193.
44. Thompson P.M., Mega M.S., Woods R.P., Zoumalan C.I., Lindshield C.J., Blanton R.E., Moussai J., Holmes C.J., Cummings J.L., Toga A.W. Cortical change in Alzheimer's disease detected with a disease-specific population-based brain atlas. Cereb. Cortex 2001, 11(1):1-16.
45. Tzarouchi L.C., Astrakas L.G., Xydis V., Zikou A., Kosta P., Drougia A., Andronikou S., Argyropoulou M.I. Age-related grey matter changes in preterm infants: an MRI study. Neuroimage 2009, 47(4):1148-1153.
46. Viola P., Wells W.M. Alignment by maximization of mutual information. Int. J. Comput. Vision 1997, 24(2):137-154.
47. Wang W., Hoerder-Suabedissen A., Oeschger F., Bayatti N., Ip B., Lindsay S., Supramaniam V., Srinivasan L., Rutherford M., Mollgard K., Clowry G., Molnar Z. Subplate in the developing cortex of mouse and human. J. Anat. 2010, 217:368-380.
48. Zhang Hui, Yushkevich Paul A., Rueckert Daniel, Gee James C. Tensor-based morphometry of fibrous structures with application to human brain white matter. Medical Image Computing and Computer Assisted Intervention 2009, 466-473.