-
1
-
-
0028685490
-
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
-
CISMB, San Diego, CA
-
Bailey TL, Elkan C. 1994. Fitting a mixture model by expectation maximization to discover motifs in biopolymers, p 28-36. In Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, vol 2. ICISMB, San Diego, CA.
-
(1994)
Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology
, vol.2
, pp. 28-36
-
-
Bailey, T.L.1
Elkan, C.2
-
2
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
-
(1976)
Anal. Biochem.
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
3
-
-
33645502116
-
Biocontrol of avocado dematophora root rot by antagonistic Pseudomonas fluorescens PCL1606 correlates with the production of 2-hexyl 5-propyl resorcinol
-
Cazorla FM, et al. 2006. Biocontrol of avocado dematophora root rot by antagonistic Pseudomonas fluorescens PCL1606 correlates with the production of 2-hexyl 5-propyl resorcinol. Mol. Plant-Microbe Interact. 19:418-428.
-
(2006)
Mol. Plant-Microbe Interact.
, vol.19
, pp. 418-428
-
-
Cazorla, F.M.1
-
4
-
-
0017251574
-
Metabolism of resorcinylic compounds by bacteria: alternative pathways for resorcinol catabolism in Pseudomonas putida
-
Chapman PJ, Ribbons DW. 1976. Metabolism of resorcinylic compounds by bacteria: alternative pathways for resorcinol catabolism in Pseudomonas putida. J. Bacteriol. 125:985-998.
-
(1976)
J. Bacteriol.
, vol.125
, pp. 985-998
-
-
Chapman, P.J.1
Ribbons, D.W.2
-
5
-
-
35848968662
-
Biosynthesis of lipid resorcinols and benzoquinones in isolated secretory plant root hairs
-
Dayan FE, Watson SB, Nanayakkara NPD. 2007. Biosynthesis of lipid resorcinols and benzoquinones in isolated secretory plant root hairs. J. Exp. Bot. 58:3263-3272.
-
(2007)
J. Exp. Bot.
, vol.58
, pp. 3263-3272
-
-
Dayan, F.E.1
Watson, S.B.2
Nanayakkara, N.P.D.3
-
6
-
-
0035113641
-
Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida
-
Duque E, Segura A, Mosqueda G, Ramos JL. 2001. Global and cognate regulators control the expression of the organic solvent efflux pumps TtgABC and TtgDEF of Pseudomonas putida. Mol. Microbiol. 39:1100-1106.
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 1100-1106
-
-
Duque, E.1
Segura, A.2
Mosqueda, G.3
Ramos, J.L.4
-
7
-
-
0029864057
-
p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization ofDNAcarrying the cmt operon
-
Eaton RW. 1996. p-Cumate catabolic pathway in Pseudomonas putida Fl: cloning and characterization ofDNAcarrying the cmt operon. J. Bacteriol. 178:1351-1362.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 1351-1362
-
-
Eaton, R.W.1
-
8
-
-
0030911409
-
p-Cymene catabolic pathway in Pseudomonas putida F1: cloning and characterization ofDNAencoding conversion of p-cymene to p-cumate
-
Eaton RW. 1997. p-Cymene catabolic pathway in Pseudomonas putida F1: cloning and characterization ofDNAencoding conversion of p-cymene to p-cumate. J. Bacteriol. 179:3171-3180.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 3171-3180
-
-
Eaton, R.W.1
-
9
-
-
0346964261
-
EthR, a repressor of the TetR/CamR family implicated in ethionamide resistance in mycobacteria, octamerizes cooperatively on its operator
-
Engohang-Ndong J, et al. 2004. EthR, a repressor of the TetR/CamR family implicated in ethionamide resistance in mycobacteria, octamerizes cooperatively on its operator. Mol. Microbiol. 51:175-188.
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 175-188
-
-
Engohang-Ndong, J.1
-
10
-
-
47249116171
-
PigZ, a TetR/AcrR family repressor, modulates secondary metabolism via the expression of a putative four-component resistance-nodulation-celldivision efflux pump, ZrpADBC, in Serratia s
-
Gristwood T, Fineran PC, Everson L, Salmond GPC. 2008. PigZ, a TetR/AcrR family repressor, modulates secondary metabolism via the expression of a putative four-component resistance-nodulation-celldivision efflux pump, ZrpADBC, in Serratia s. ATCC 39006. Mol. Microbiol. 69:418-435.
-
(2008)
ATCC 39006. Mol. Microbiol.
, vol.69
, pp. 418-435
-
-
Gristwood, T.1
Fineran, P.C.2
Everson, L.3
Salmond, G.P.C.4
-
11
-
-
0032541162
-
QacR is a repressor protein that regulates expression of the Staphylococcus aureus multidrug efflux pump QacA
-
Grkovic S, Brown MH, Roberts NJ, Paulsen IT, Skurray RA. 1998. QacR is a repressor protein that regulates expression of the Staphylococcus aureus multidrug efflux pump QacA. J. Biol. Chem. 273:18665-18673.
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 18665-18673
-
-
Grkovic, S.1
Brown, M.H.2
Roberts, N.J.3
Paulsen, I.T.4
Skurray, R.A.5
-
12
-
-
0035205399
-
The staphylococcal QacR multidrug regulator binds a correctly spaced operator as a pair of dimers
-
Grkovic S, Brown MH, Schumacher MA, Brennan RG, Skurray RA. 2001. The staphylococcal QacR multidrug regulator binds a correctly spaced operator as a pair of dimers. J. Bacteriol. 183:7102-7109.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 7102-7109
-
-
Grkovic, S.1
Brown, M.H.2
Schumacher, M.A.3
Brennan, R.G.4
Skurray, R.A.5
-
13
-
-
0019490078
-
Metabolism of resorcinylic compounds by bacteria: new pathway for resorcinol catabolism in Azotobacter vinelandii
-
Groseclose EE, Ribbons DW. 1981. Metabolism of resorcinylic compounds by bacteria: new pathway for resorcinol catabolism in Azotobacter vinelandii. J. Bacteriol. 146:460-466.
-
(1981)
J. Bacteriol.
, vol.146
, pp. 460-466
-
-
Groseclose, E.E.1
Ribbons, D.W.2
-
14
-
-
0026526296
-
Repression of Escherichia coli purB is by a transcriptional roadblock mechanism
-
He B, Zalkin H. 1992. Repression of Escherichia coli purB is by a transcriptional roadblock mechanism. J. Bacteriol. 174:7121-7127.
-
(1992)
J. Bacteriol.
, vol.174
, pp. 7121-7127
-
-
He, B.1
Zalkin, H.2
-
15
-
-
0028030082
-
Mechanisms underlying expression of Tn10 encoded tetracycline resistance
-
Hillen W, Berens C. 1994. Mechanisms underlying expression of Tn10 encoded tetracycline resistance. Annu. Rev. Microbiol. 48:345-369.
-
(1994)
Annu. Rev. Microbiol.
, vol.48
, pp. 345-369
-
-
Hillen, W.1
Berens, C.2
-
16
-
-
33751016057
-
Genetic characterization of the resorcinol catabolic pathway in Corynebacterium glutamicum
-
Huang Y, et al. 2006. Genetic characterization of the resorcinol catabolic pathway in Corynebacterium glutamicum. Appl. Environ. Microbiol. 72:7238-7245.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 7238-7245
-
-
Huang, Y.1
-
17
-
-
0033865395
-
AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum
-
Jakoby M, Nolden L, Meier-Wagner J, Krämer R, Burkovski A. 2000. AmtR, a global repressor in the nitrogen regulation system of Corynebacterium glutamicum. Mol. Microbiol. 37:964-977.
-
(2000)
Mol. Microbiol.
, vol.37
, pp. 964-977
-
-
Jakoby, M.1
Nolden, L.2
Meier-Wagner, J.3
Krämer, R.4
Burkovski, A.5
-
18
-
-
0034972542
-
Gene replacement analysis of the butyrolactone autoregulator receptor (FarA) reveals that FarA acts as a novel regulator in secondary metabolism of Streptomyces lavendulae FRI-5
-
Kitani S, Yamada Y, Nihira T. 2001. Gene replacement analysis of the butyrolactone autoregulator receptor (FarA) reveals that FarA acts as a novel regulator in secondary metabolism of Streptomyces lavendulae FRI-5. J. Bacteriol. 183:4357-4363.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4357-4363
-
-
Kitani, S.1
Yamada, Y.2
Nihira, T.3
-
19
-
-
0027171190
-
Isolation and characterization of a subsurface bacterium that degrades aniline and methylanilines
-
Konopka A. 1993. Isolation and characterization of a subsurface bacterium that degrades aniline and methylanilines. FEMS Microbiol. Lett. 111:93-99.
-
(1993)
FEMS Microbiol. Lett.
, vol.111
, pp. 93-99
-
-
Konopka, A.1
-
20
-
-
79955767563
-
Crystal structures of the transcriptional repressor RolR reveals a novel recognition mechanism between inducer and regulator
-
doi:10.1371/journal.pone.0019529
-
Li D-F, et al. 2011. Crystal structures of the transcriptional repressor RolR reveals a novel recognition mechanism between inducer and regulator. PLoS One 6:e19529. doi:10.1371/journal.pone.0019529.
-
(2011)
PLoS One
, vol.6
-
-
Li, D-F.1
-
21
-
-
35449001633
-
The impact of PHB accumulation on L-glutamate production by recombinant Corynebacterium glutamicum
-
Liu Q, Ouyang S-P, Kim J, Chen G-Q. 2007. The impact of PHB accumulation on L-glutamate production by recombinant Corynebacterium glutamicum. J. Biotechnol. 132:273-279.
-
(2007)
J. Biotechnol.
, vol.132
, pp. 273-279
-
-
Liu, Q.1
Ouyang, S-P.2
Kim, J.3
Chen, G-Q.4
-
25
-
-
0034087676
-
Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system
-
Orth P, Schnappinger D, Hillen W, Saenger W, Hinrichs W. 2000. Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system. Nat. Struct. Biol. 7:215-219.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 215-219
-
-
Orth, P.1
Schnappinger, D.2
Hillen, W.3
Saenger, W.4
Hinrichs, W.5
-
26
-
-
20544432535
-
The TetR family of transcriptional repressors
-
Ramos JL, et al. 2005. The TetR family of transcriptional repressors. Microbiol. Mol. Biol. Rev. 69:326-356.
-
(2005)
Microbiol. Mol. Biol. Rev.
, vol.69
, pp. 326-356
-
-
Ramos, J.L.1
-
27
-
-
0029868462
-
DNA-binding properties of the BetI repressor protein of Escherichia coli: the inducer choline stimulates BetI-DNA complex formation
-
Rokenes TP, Lamark T, Strom AR. 1996. DNA-binding properties of the BetI repressor protein of Escherichia coli: the inducer choline stimulates BetI-DNA complex formation. J. Bacteriol. 178:1663-1670.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 1663-1670
-
-
Rokenes, T.P.1
Lamark, T.2
Strom, A.R.3
-
28
-
-
0034674256
-
The tetracycline repressor: a paradigm for a biological switch
-
Saenger W, Orth P, Kisker C, Hillen W, Hinrichs W. 2000. The tetracycline repressor: a paradigm for a biological switch. Angew. Chem. Int. Ed. 39:2042-2052.
-
(2000)
Angew. Chem. Int. Ed.
, vol.39
, pp. 2042-2052
-
-
Saenger, W.1
Orth, P.2
Kisker, C.3
Hillen, W.4
Hinrichs, W.5
-
29
-
-
0036841344
-
Cloning and characterization of SmeT, a repressor of the Stenotrophomonas maltophilia multidrug efflux pump SmeDEF
-
Sanchez P, Alonso A, Martinez JL. 2002. Cloning and characterization of SmeT, a repressor of the Stenotrophomonas maltophilia multidrug efflux pump SmeDEF. Antimicrob. Agents Chemother. 46:3386-3393.
-
(2002)
Antimicrob. Agents Chemother.
, vol.46
, pp. 3386-3393
-
-
Sanchez, P.1
Alonso, A.2
Martinez, J.L.3
-
30
-
-
0036500260
-
Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR
-
Schumacher MA, et al. 2002. Structural basis for cooperative DNA binding by two dimers of the multidrug-binding protein QacR. EMBO J. 21:1210-1218.
-
(2002)
EMBO J.
, vol.21
, pp. 1210-1218
-
-
Schumacher, M.A.1
-
31
-
-
0036835575
-
Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1
-
Tauch A, et al. 2002. Efficient electrotransformation of Corynebacterium diphtheriae with a mini-replicon derived from the Corynebacterium glutamicum plasmid pGA1. Curr. Microbiol. 45:362-367.
-
(2002)
Curr. Microbiol.
, vol.45
, pp. 362-367
-
-
Tauch, A.1
-
32
-
-
4544275675
-
Bacterial transcriptional regulators for degradation pathways of aromatic compounds
-
Tropel D, van der Meer JR. 2004. Bacterial transcriptional regulators for degradation pathways of aromatic compounds. Microbiol. Mol. Biol. Rev. 68:474-500.
-
(2004)
Microbiol. Mol. Biol. Rev.
, vol.68
, pp. 474-500
-
-
Tropel, D.1
van der Meer, J.R.2
-
34
-
-
77949417116
-
PcaO positively regulates pcaHG of the β-ketoadipate pathway in Corynebacterium glutamicum
-
Zhao K-X, Huang Y, Chen X, Wang N-X, Liu S-J. 2010. PcaO positively regulates pcaHG of the β-ketoadipate pathway in Corynebacterium glutamicum. J. Bacteriol. 192:1565-1572.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 1565-1572
-
-
Zhao, K-X.1
Huang, Y.2
Chen, X.3
Wang, N-X.4
Liu, S-J.5
|