-
1
-
-
0022599151
-
The heme electronic structure of reduced cytochromes P 450 and P 420 as studied by low-temperature magnetic circular dichroism
-
(Moscow)
-
Sharonov YA (1986) The heme electronic structure of reduced cytochromes P 450 and P 420 as studied by low-temperature magnetic circular dichroism. Mol Biol (Moscow) 20:440-450
-
(1986)
Mol Biol
, vol.20
, pp. 440-450
-
-
Sharonov, Y.A.1
-
2
-
-
0002275987
-
Bioinorganic spectroscopy
-
Solomon EI, Lever ABP (eds) Wiley, New York
-
Solomon EI, Hanson MA (1999) Bioinorganic spectroscopy. In: Solomon EI, Lever ABP (eds) Inorganic electronic structure and spectroscopy, vol 2. Wiley, New York, pp 1-129
-
(1999)
Inorganic Electronic Structure and Spectroscopy
, vol.2
, pp. 1-129
-
-
Solomon, E.I.1
Hanson, M.A.2
-
3
-
-
0000717649
-
Effect of low temperature on the absorption spectra of hemoproteins, with observations on the absorption spectrum of oxygen
-
Keilin D, Hartree EF (1949) Effect of low temperature on the absorption spectra of hemoproteins, with observations on the absorption spectrum of oxygen. Nature 164:254-259
-
(1949)
Nature
, vol.164
, pp. 254-259
-
-
Keilin, D.1
Hartree, E.F.2
-
4
-
-
0015997959
-
Aromatic contributions to circular dichroism spectra of proteins
-
Strickland EH (1974) Aromatic contributions to circular dichroism spectra of proteins. CRC Crit Rev Biochem 2:113-175
-
(1974)
CRC Crit Rev Biochem
, vol.2
, pp. 113-175
-
-
Strickland, E.H.1
-
5
-
-
0014559763
-
Fine structure in the near-ultraviolet circular dichroism and absorption spectra of tryptophan derivatives and chymotrypsinogen A at 77 K
-
Strickland EH, Horwitz J, Billups C (1969) Fine structure in the near-ultraviolet circular dichroism and absorption spectra of tryptophan derivatives and chymotrypsinogen A at 77 K. Biochemistry 8:3205-3213
-
(1969)
Biochemistry
, vol.8
, pp. 3205-3213
-
-
Strickland, E.H.1
Horwitz, J.2
Billups, C.3
-
6
-
-
0026975582
-
Substrate induced electronic- conformational interactions in active site of reduced bacterial cytochrome P 450CAM and analysis of the heme electronic structure
-
(Moscow)
-
Sharonov YA (1992) Substrate induced electronic- conformational interactions in active site of reduced bacterial cytochrome P 450CAM and analysis of the heme electronic structure. Mol Biol (Moscow) 26:1251-1262
-
(1992)
Mol Biol
, vol.26
, pp. 1251-1262
-
-
Sharonov, Y.A.1
-
7
-
-
0035795145
-
The energy level scheme for the ferryl heme in compound II of the peroxidase-catalase family as determined from analysis of low-temperature magnetic circular dichroism
-
Sharonov YA (2001) The energy level scheme for the ferryl heme in compound II of the peroxidase-catalase family as determined from analysis of low-temperature magnetic circular dichroism. Biochim Biophys Acta 1504:444-451
-
(2001)
Biochim Biophys Acta
, vol.1504
, pp. 444-451
-
-
Sharonov, Y.A.1
-
8
-
-
0029466670
-
Magnetic circular dichroism spectroscopy as a probe of the geometric and electronic structure of non-heme ferrous enzymes
-
Solomon EI, Pavel EG, Loeb KE, Campochiaro C (1995) Magnetic circular dichroism spectroscopy as a probe of the geometric and electronic structure of non-heme ferrous enzymes. Coord Chem Rev 144:369-460
-
(1995)
Coord Chem Rev
, vol.144
, pp. 369-460
-
-
Solomon, E.I.1
Pavel, E.G.2
Loeb, K.E.3
Campochiaro, C.4
-
9
-
-
0016347811
-
The structure and spectra of the chromophore of the visual pigments
-
Honig B, Ebrey TG (1974) The structure and spectra of the chromophore of the visual pigments. Annu Rev Biophys Bioeng 3:151-177
-
(1974)
Annu Rev Biophys Bioeng
, vol.3
, pp. 151-177
-
-
Honig, B.1
Ebrey, T.G.2
-
10
-
-
0035345448
-
Trapping and spectroscopic identification of the photointermediates of bacteriorhodopsin at low temperatures
-
Balashov SP, Ebrey TG (2001) Trapping and spectroscopic identification of the photointermediates of bacteriorhodopsin at low temperatures. Photochem Photobiol 73:453-462
-
(2001)
Photochem Photobiol
, vol.73
, pp. 453-462
-
-
Balashov, S.P.1
Ebrey, T.G.2
-
11
-
-
9244240777
-
Physics of proteins at low temperature
-
Ponkratov VV, Friedrich J, Vanderkooi JM, Burin AL, Berlin YA (2004) Physics of proteins at low temperature. J Low Temp Phys 137:289-317
-
(2004)
J Low Temp Phys
, vol.137
, pp. 289-317
-
-
Ponkratov, V.V.1
Friedrich, J.2
Vanderkooi, J.M.3
Burin, A.L.4
Berlin, Y.A.5
-
12
-
-
0000580978
-
Proteins and pressure
-
Frauenfelder H, Alberding NA, Ansari A, Braunstein D, Cowen BR, Hong MK, Iben IET, Johnson JB, Luck S et al (1990) Proteins and pressure. J Phys Chem 94:1024-1037
-
(1990)
J Phys Chem
, vol.94
, pp. 1024-1037
-
-
Frauenfelder, H.1
Alberding, N.A.2
Ansari, A.3
Braunstein, D.4
Cowen, B.R.5
Hong, M.K.6
Iben, I.E.T.7
Johnson, J.B.8
Luck, S.9
-
13
-
-
0029057027
-
Structural and electronic factors that influence oxygen affinities: A spectroscopic comparison of ferrous and cobaltous oxymyoglobin
-
Miller LM, ChanceMR (1995) Structural and electronic factors that influence oxygen affinities: A spectroscopic comparison of ferrous and cobaltous oxymyoglobin. Biochemistry 34:10170-10179
-
(1995)
Biochemistry
, vol.34
, pp. 10170-10179
-
-
Miller, L.M.1
Chance, M.R.2
-
14
-
-
0036157060
-
The effect of ligand dynamics on heme electronic transition band III in myoglobin
-
Nienhaus K, Lamb DC, Deng P, Nienhaus GU (2002) The effect of ligand dynamics on heme electronic transition band III in myoglobin. Biophys J 82:1059-1067
-
(2002)
Biophys J
, vol.82
, pp. 1059-1067
-
-
Nienhaus, K.1
Lamb, D.C.2
Deng, P.3
Nienhaus, G.U.4
-
15
-
-
21244456387
-
Disentangling ligand migration and heme pocket relaxation in cytochrome P450cam
-
Tetreau C, Mouawad L, Murail S, Duchambon P, Blouquit Y, Lavalette D (2005) Disentangling ligand migration and heme pocket relaxation in cytochrome P450cam. Biophys J 88:1250-1263
-
(2005)
Biophys J
, vol.88
, pp. 1250-1263
-
-
Tetreau, C.1
Mouawad, L.2
Murail, S.3
Duchambon, P.4
Blouquit, Y.5
Lavalette, D.6
-
16
-
-
0028922168
-
Low temperature optical absorption spectroscopy: An approach to the study of stereodynamic properties of hemeproteins
-
Cupane A, Leone M, Vitrano E, Cordone L (1995) Low temperature optical absorption spectroscopy: an approach to the study of stereodynamic properties of hemeproteins. Eur Biophys J 23:385-398
-
(1995)
Eur Biophys J
, vol.23
, pp. 385-398
-
-
Cupane, A.1
Leone, M.2
Vitrano, E.3
Cordone, L.4
-
17
-
-
35948986658
-
Structural characterization of the fleeting ferric peroxo species in myoglobin: Experiment and theory
-
Unno M, Chen H, Kusama S, Shaik S, Ikeda- Saito M (2007) Structural characterization of the fleeting ferric peroxo species in myoglobin: Experiment and theory. J Am Chem Soc 129:13394-13395
-
(2007)
J Am Chem Soc
, vol.129
, pp. 13394-13395
-
-
Unno, M.1
Chen, H.2
Kusama, S.3
Shaik, S.4
Ikeda- Saito, M.5
-
18
-
-
33846050557
-
Cryoradiolytic reduction of crystalline heme proteins: Analysis by UV-vis spectroscopy and Xray crystallography
-
Beitlich T, Kuehnel K, Schulze-Briese C, Shoeman RL, Schlichting I (2007) Cryoradiolytic reduction of crystalline heme proteins: analysis by UV-vis spectroscopy and Xray crystallography. J Synchrotron Radiat 14:11-23
-
(2007)
J Synchrotron Radiat
, vol.14
, pp. 11-23
-
-
Beitlich, T.1
Kuehnel, K.2
Schulze-Briese, C.3
Shoeman, R.L.4
Schlichting, I.5
-
19
-
-
0004249181
-
Low Temperature Spectroscopy
-
American Elsevier
-
Meyer B (1971) Low temperature spectroscopy. American Elsevier Publishing Co., New York, 653 pp
-
(1971)
Publishing Co., New York
-
-
Meyer, B.1
-
23
-
-
0027430118
-
Low-temperature stoppedflow rapid-scanning spectroscopy: Performance tests and use of aqueous salt cryosolvents
-
Auld DS (1993) Low-temperature stoppedflow rapid-scanning spectroscopy: performance tests and use of aqueous salt cryosolvents. Meth Enzymol 226:553-565
-
(1993)
Meth Enzymol
, vol.226
, pp. 553-565
-
-
Auld, D.S.1
-
25
-
-
0011761816
-
Cryoenzymology in mixed solvents without cosolvent effects on enzyme specific activity
-
Douzou P, Balny C (1977) Cryoenzymology in mixed solvents without cosolvent effects on enzyme specific activity. Proc Natl Acad Sci U S A 74:2297-2300
-
(1977)
Proc Natl Acad Sci U S A
, vol.74
, pp. 2297-2300
-
-
Douzou, P.1
Balny, C.2
-
26
-
-
0021187796
-
Proteins at work: Pictures at subzero temperatures
-
Douzou P, Petsko GA (1984) Proteins at work: Pictures at subzero temperatures. Adv Protein Chem 36:245-361
-
(1984)
Adv Protein Chem
, vol.36
, pp. 245-361
-
-
Douzou, P.1
Petsko, G.A.2
-
29
-
-
0000070465
-
Physical chemical data for mixed solvents used in low temperature biochemistry
-
Fasman GD (ed) CRC, Cleveland
-
Douzou P, Hui Bon Hoa G, Maurel P, Travers F (1976) Physical chemical data for mixed solvents used in low temperature biochemistry. In: Fasman GD (ed) Physical and chemical data, vol 1, CRC handbook of biochemistry and molecular biology. CRC, Cleveland, pp 520-539
-
(1976)
Physical and Chemical Data, Vol 1, CRC Handbook of Biochemistry and Molecular Biology
, pp. 520-539
-
-
Douzou, P.1
Hui Bon Hoa, G.2
Maurel, P.3
Travers, F.4
-
30
-
-
0041320729
-
Protein in sugar films and in glycerol/water as examined by infrared spectroscopy and by the fluorescence and phosphorescence of tryptophan
-
Wright WW, Guffanti GT, Vanderkooi JM (2003) Protein in sugar films and in glycerol/water as examined by infrared spectroscopy and by the fluorescence and phosphorescence of tryptophan. Biophys J 85:1980-1995
-
(2003)
Biophys J
, vol.85
, pp. 1980-1995
-
-
Wright, W.W.1
Guffanti, G.T.2
Vanderkooi, J.M.3
-
31
-
-
47049130252
-
Ligand dynamics in heme proteins observed by Fourier transform infrared spectroscopy at cryogenic temperatures
-
Nienhaus K, Nienhaus GU (2008) Ligand dynamics in heme proteins observed by Fourier transform infrared spectroscopy at cryogenic temperatures.Meth Enzymol 437:347-378
-
(2008)
Meth Enzymol
, vol.437
, pp. 347-378
-
-
Nienhaus, K.1
Nienhaus, G.U.2
-
33
-
-
0342445403
-
Cryosolvents useful for protein and enzyme studies below -100 degrees C
-
Reat V, Finney JL, Steer A, Roberts MA, Smith J, Dunn R, Peterson M, Daniel R (2000) Cryosolvents useful for protein and enzyme studies below -100 degrees C. J Biochem Biophys Meth 42:97-103
-
(2000)
J Biochem Biophys Meth
, vol.42
, pp. 97-103
-
-
Reat, V.1
Finney, J.L.2
Steer, A.3
Roberts, M.A.4
Smith, J.5
Dunn, R.6
Peterson, M.7
Daniel, R.8
-
34
-
-
33746376611
-
Hydrogen bonding and the cryoprotective properties of glycerol/water mixtures
-
Dashnau JL, Nucci NV, Sharp KA, Vanderkooi JM (2006) Hydrogen bonding and the cryoprotective properties of glycerol/water mixtures. J Phys Chem B 110:13670-13677
-
(2006)
J Phys Chem B
, vol.110
, pp. 13670-13677
-
-
Dashnau, J.L.1
Nucci, N.V.2
Sharp, K.A.3
Vanderkooi, J.M.4
-
35
-
-
0015882035
-
Enzymology at sub-zero temperatures
-
Douzou P (1973) Enzymology at sub-zero temperatures. Mol Cell Biochem 1:15-27
-
(1973)
Mol Cell Biochem
, vol.1
, pp. 15-27
-
-
Douzou, P.1
-
36
-
-
0017340407
-
Enzymology at subzero temperatures
-
Douzou P (1977) Enzymology at subzero temperatures. Adv Enzymol Relat Areas Mol Biol 45:157-272
-
(1977)
Adv Enzymol Relat Areas Mol Biol
, vol.45
, pp. 157-272
-
-
Douzou, P.1
-
37
-
-
0017819131
-
Cryoenzymology: The use of fluid solvent mixtures at subzero temperatures for the study of biochemical reactions
-
Cox RP (1978) Cryoenzymology: the use of fluid solvent mixtures at subzero temperatures for the study of biochemical reactions. Biochem Soc Trans 6:689-697
-
(1978)
Biochem Soc Trans
, vol.6
, pp. 689-697
-
-
Cox, R.P.1
-
38
-
-
0022555880
-
Protein folding in cryosolvents and at subzero temperatures
-
Fink AL (1986) Protein folding in cryosolvents and at subzero temperatures. Methods Enzymol 131:173-185
-
(1986)
Methods Enzymol
, vol.131
, pp. 173-185
-
-
Fink, A.L.1
-
41
-
-
0017129415
-
Practical potentiometric determinations of proton activity in hydro organic solvents at subzero temperatures
-
Larroque C, Maurel P, Balny C, Douzou P (1976) Practical potentiometric determinations of proton activity in hydro organic solvents at subzero temperatures. Anal Biochem 73:9-19
-
(1976)
Anal Biochem
, vol.73
, pp. 9-19
-
-
Larroque, C.1
Maurel, P.2
Balny, C.3
Douzou, P.4
-
42
-
-
0017616389
-
Measurement of the pH of frozen buffer solutions by using pH indicators
-
Orii Y, Morita M (1977) Measurement of the pH of frozen buffer solutions by using pH indicators. J Biochem Biophys Meth 81:163-168
-
(1977)
J Biochem Biophys Meth
, vol.81
, pp. 163-168
-
-
Orii, Y.1
Morita, M.2
-
43
-
-
0017666980
-
Changes in apparent pH on freezing aqueous buffer solutions and their relevance to biochemical electron-paramagnetic-resonance spectroscopy
-
Williams-Smith DL, Bray RC, Barber MJ, Tsopanakis AD, Vincent SP (1977) Changes in apparent pH on freezing aqueous buffer solutions and their relevance to biochemical electron-paramagnetic-resonance spectroscopy. Biochem J 167:593-600
-
(1977)
Biochem J
, vol.167
, pp. 593-600
-
-
Williams-Smith, D.L.1
Bray, R.C.2
Barber, M.J.3
Tsopanakis, A.D.4
Vincent, S.P.5
-
44
-
-
33644539523
-
Enhanced protonation of cresol red in acidic aqueous solutions caused by freezing
-
Heger D, Klanova J, Klan P (2006) Enhanced protonation of cresol red in acidic aqueous solutions caused by freezing. J Phys Chem B 110:1277-1287
-
(2006)
J Phys Chem B
, vol.110
, pp. 1277-1287
-
-
Heger, D.1
Klanova, J.2
Klan, P.3
-
45
-
-
0027957248
-
The proton activity at cryogenic temperatures-A possible influence on the spin state of the heme iron of cytochrome P-450cam in supercooled buffered solutions
-
Schulze H, Ristau O, Jung C (1994) The proton activity at cryogenic temperatures-a possible influence on the spin state of the heme iron of cytochrome P-450cam in supercooled buffered solutions. Biochim Biophys Acta 1183:491-498
-
(1994)
Biochim Biophys Acta
, vol.1183
, pp. 491-498
-
-
Schulze, H.1
Ristau, O.2
Jung, C.3
-
46
-
-
38849103102
-
A temperature independent pH (TIP) buffer for biomedical biophysical applications at low temperatures
-
Sieracki NA, Hwang HJ, Lee MK, Garner DK, Lu Y (2008) A temperature independent pH (TIP) buffer for biomedical biophysical applications at low temperatures. Chem Commun: 823-825
-
(2008)
Chem Commun
, pp. 823-825
-
-
Sieracki, N.A.1
Hwang, H.J.2
Lee, M.K.3
Garner, D.K.4
Lu, Y.5
-
47
-
-
84888472955
-
A glossary of terms used in chemical kinetics, including reaction dynamics
-
Laidler KJ (1996) A glossary of terms used in chemical kinetics, including reaction dynamics. Pure Appl Chem 68:149-192
-
(1996)
Pure Appl Chem
, vol.68
, pp. 149-192
-
-
Laidler, K.J.1
-
48
-
-
33747736671
-
The ferrous-dioxygen intermediate in human cytochrome P450 3A4: Substrate dependence of formation and decay kinetics
-
Denisov IG, Grinkova YV, Baas BJ, Sligar SG (2006) The ferrous-dioxygen intermediate in human cytochrome P450 3A4: Substrate dependence of formation and decay kinetics. J Biol Chem 281:23313-23318
-
(2006)
J Biol Chem
, vol.281
, pp. 23313-23318
-
-
Denisov, I.G.1
Grinkova, Y.V.2
Baas, B.J.3
Sligar, S.G.4
-
49
-
-
33644874269
-
Reactivity of the hemedioxygen complex of the inducible nitric oxide synthase in the presence of alternative substrates
-
Lefevre-Groboillot D, Boucher JL, Mansuy D, Stuehr DJ (2006) Reactivity of the hemedioxygen complex of the inducible nitric oxide synthase in the presence of alternative substrates. FEBS J 273:180-191
-
(2006)
FEBS J
, vol.273
, pp. 180-191
-
-
Lefevre-Groboillot, D.1
Boucher, J.L.2
Mansuy, D.3
Stuehr, D.J.4
-
50
-
-
0034088779
-
The catalytic pathway of cytochrome P450cam at atomic resolution
-
Schlichting I, Berendzen J, Chu K, Stock AM, Maves SA, Benson DE, Sweet RM, Ringe D, Petsko GA, Sligar SG (2000) The catalytic pathway of cytochrome P450cam at atomic resolution. Science 287:1615-1622
-
(2000)
Science
, vol.287
, pp. 1615-1622
-
-
Schlichting, I.1
Berendzen, J.2
Chu, K.3
Stock, A.M.4
Maves, S.A.5
Benson, D.E.6
Sweet, R.M.7
Ringe, D.8
Petsko, G.A.9
Sligar, S.G.10
-
51
-
-
44649151062
-
The ferrous-oxy complex of human aromatase
-
Grinkova YV, Denisov IG, Waterman MR, Arase M, Kagawa N, Sligar SG (2008) The ferrous-oxy complex of human aromatase. BiochemBiophys Res Commun 372:379-382
-
(2008)
BiochemBiophys Res Commun
, vol.372
, pp. 379-382
-
-
Grinkova, Y.V.1
Denisov, I.G.2
Waterman, M.R.3
Arase, M.4
Kagawa, N.5
Sligar, S.G.6
-
52
-
-
0019379397
-
A non-equilibrium state of deoxyhaemoglobin. Temperature-dependence and oxygen binding
-
Van Leeuwen JW, Butler J, Swallow AJ (1981) A non-equilibrium state of deoxyhaemoglobin. Temperature-dependence and oxygen binding. Biochim Biophys Acta 667:185-196
-
(1981)
Biochim Biophys Acta
, vol.667
, pp. 185-196
-
-
Van Leeuwen, J.W.1
Butler, J.2
Swallow, A.J.3
-
53
-
-
0025000048
-
Thermodynamic study of protein dynamic structure in the oxygen binding reaction of myoglobin
-
Sato F, Shiro Y, Sakaguchi Y, Iizuka T, Hayashi H (1990) Thermodynamic study of protein dynamic structure in the oxygen binding reaction of myoglobin. J Biol Chem 265:18823-18828
-
(1990)
J Biol Chem
, vol.265
, pp. 18823-18828
-
-
Sato, F.1
Shiro, Y.2
Sakaguchi, Y.3
Iizuka, T.4
Hayashi, H.5
-
54
-
-
0030825119
-
The role of entropy in the discrimination between CO and O2 in myoglobin
-
Filiaci M, Nienhaus GU (1997) The role of entropy in the discrimination between CO and O2 in myoglobin. Eur Biophys J 26: 209-214
-
(1997)
Eur Biophys J
, vol.26
, pp. 209-214
-
-
Filiaci, M.1
Nienhaus, G.U.2
-
55
-
-
0039158100
-
Dynamics of carbon monoxide binding with cytochromes P-450
-
Tetreau C, Di Primo C, Lange R, Tourbez H, Lavalette D (1997) Dynamics of carbon monoxide binding with cytochromes P-450. Biochemistry 36:10262-10275
-
(1997)
Biochemistry
, vol.36
, pp. 10262-10275
-
-
Tetreau, C.1
Di Primo, C.2
Lange, R.3
Tourbez, H.4
Lavalette, D.5
-
56
-
-
0022782896
-
New trends in cryoenzymology: Probing the functional role of protein dynamics by single-step kinetics
-
Barman T, Travers F, Balny C, Hui Bon Hoa G, Douzou P (1986) New trends in cryoenzymology: probing the functional role of protein dynamics by single-step kinetics. Biochimie 68:1041-1051
-
(1986)
Biochimie
, vol.68
, pp. 1041-1051
-
-
Barman, T.1
Travers, F.2
Balny, C.3
Hui Bon Hoa, G.4
Douzou, P.5
-
57
-
-
0035893829
-
Characterization of the oxygenated intermediate of the thermophilic cytochrome P450 CYP119
-
Denisov IG, Hung S-C, Weiss KE, Mclean MA, Shiro Y, Park S-Y, Champion PM, Sligar SG (2001) Characterization of the oxygenated intermediate of the thermophilic cytochrome P450 CYP119. J Inorg Biochem 87:215-226
-
(2001)
J Inorg Biochem
, vol.87
, pp. 215-226
-
-
Denisov, I.G.1
Hung, S.-C.2
Weiss, K.E.3
McLean, M.A.4
Shiro, Y.5
Park, S.-Y.6
Champion, P.M.7
Sligar, S.G.8
-
58
-
-
18744374132
-
Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase, the active intermediate of enzymatic heme oxygenation
-
Denisov IG, Ikeda-Saito M, Yoshida T, Sligar SG (2002) Cryogenic absorption spectra of hydroperoxo-ferric heme oxygenase, the active intermediate of enzymatic heme oxygenation. FEBS Lett 532:203-206
-
(2002)
FEBS Lett
, vol.532
, pp. 203-206
-
-
Denisov, I.G.1
Ikeda-Saito, M.2
Yoshida, T.3
Sligar, S.G.4
-
59
-
-
0036029799
-
Cryoradiolysis for the study of P450 reaction intermediates
-
Denisov IG, Makris TM, Sligar SG (2002) Cryoradiolysis for the study of P450 reaction intermediates. Meth Enzymol 357:103-115
-
(2002)
Meth Enzymol
, vol.357
, pp. 103-115
-
-
Denisov, I.G.1
Makris, T.M.2
Sligar, S.G.3
-
62
-
-
0035925164
-
Hydroxylation of camphor by reduced oxy-cytochrome P450cam: Mechanistic implications of EPR and ENDOR studies of catalytic intermediates in native and mutant enzymes
-
Davydov R, Makris TM, Kofman V, Werst DE, Sligar SG, Hoffman BM (2001) Hydroxylation of camphor by reduced oxy-cytochrome P450cam: Mechanistic implications of EPR and ENDOR studies of catalytic intermediates in native and mutant enzymes. J Am Chem Soc 123:1403-1415
-
(2001)
J Am Chem Soc
, vol.123
, pp. 1403-1415
-
-
Davydov, R.1
Makris, T.M.2
Kofman, V.3
Werst, D.E.4
Sligar, S.G.5
Hoffman, B.M.6
-
63
-
-
33846596563
-
Cryoradiolytic reduction of heme proteins: Maximizing dose-dependent yield
-
Denisov IG, Victoria DC, Sligar SG (2007) Cryoradiolytic reduction of heme proteins: Maximizing dose-dependent yield. Radiat Phys Chem 76:714-721
-
(2007)
Radiat Phys Chem
, vol.76
, pp. 714-721
-
-
Denisov, I.G.1
Victoria, D.C.2
Sligar, S.G.3
-
64
-
-
0001490107
-
Electron paramagnetic resonance study of the mixed-valent diiron center in Escherichia coli ribonucleotide reductase produced by reduction of radicalfree protein R2 at 77 K
-
Davydov R, Kuprin S, Graeslund A, Ehrenberg A (1994) Electron paramagnetic resonance study of the mixed-valent diiron center in Escherichia coli ribonucleotide reductase produced by reduction of radicalfree protein R2 at 77 K. J Am Chem Soc 116:11120-11128
-
(1994)
J Am Chem Soc
, vol.116
, pp. 11120-11128
-
-
Davydov, R.1
Kuprin, S.2
Graeslund, A.3
Ehrenberg, A.4
-
65
-
-
0037143567
-
EPR and ENDOR characterization of intermediates in the cryoreduced oxy-nitric oxide synthase heme domain with bound L-arginine or Nhydroxyarginine
-
Davydov R, Ledbetter-Rogers A, Martasek P, Larukhin M, Sono M, Dawson JH, Siler Masters BS, Hoffman BM (2002) EPR and ENDOR characterization of intermediates in the cryoreduced oxy-nitric oxide synthase heme domain with bound L-arginine or Nhydroxyarginine. Biochemistry 41:10375-10381
-
(2002)
Biochemistry
, vol.41
, pp. 10375-10381
-
-
Davydov, R.1
Ledbetter-Rogers, A.2
Martasek, P.3
Larukhin, M.4
Sono, M.5
Dawson, J.H.6
Siler Masters, B.S.7
Hoffman, B.M.8
-
66
-
-
0037181030
-
Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase and its Asp 140 mutants
-
Davydov R, Kofman V, Fujii H, Yoshida T, Ikeda-Saito M, Hoffman BM (2002) Catalytic mechanism of heme oxygenase through EPR and ENDOR of cryoreduced oxy-heme oxygenase and its Asp 140 mutants. J Am Chem Soc 124:1798-1808
-
(2002)
J Am Chem Soc
, vol.124
, pp. 1798-1808
-
-
Davydov, R.1
Kofman, V.2
Fujii, H.3
Yoshida, T.4
Ikeda-Saito, M.5
Hoffman, B.M.6
-
67
-
-
33846820279
-
Distinct reaction pathways followed upon reduction of oxy-heme oxygenase and oxy-myoglobin as characterized by Mossbauer spectroscopy
-
Garcia-Serres R, Davydov RM, Matsui T, Ikeda-Saito M, Hoffman BM, Huynh BH (2007) Distinct reaction pathways followed upon reduction of oxy-heme oxygenase and oxy-myoglobin as characterized by Mossbauer spectroscopy. J Am Chem Soc 129:1402-1412
-
(2007)
J Am Chem Soc
, vol.129
, pp. 1402-1412
-
-
Garcia-Serres, R.1
Davydov, R.M.2
Matsui, T.3
Ikeda-Saito, M.4
Hoffman, B.M.5
Huynh, B.H.6
-
68
-
-
42949164473
-
EPR and ENDOR studies of cryoreduced Compounds II of peroxidases and myoglobin
-
Davydov R, Osborne RL, Kim SH, Dawson JH, Hoffman BM (2008) EPR and ENDOR studies of cryoreduced Compounds II of peroxidases and myoglobin. Proton-coupled electron transfer and protonation status of ferryl hemes. Biochemistry 47:5147-5155
-
(2008)
Proton-coupled Electron Transfer and Protonation Status of Ferryl Hemes. Biochemistry
, vol.47
, pp. 5147-5155
-
-
Davydov, R.1
Osborne, R.L.2
Kim, S.H.3
Dawson, J.H.4
Hoffman, B.M.5
-
69
-
-
58149173944
-
Resonance Raman characterization of the peroxo and hydroperoxo intermediates in cytochrome P450
-
Denisov IG, Mak PJ, Makris TM, Sligar SG, Kincaid JR (2008) Resonance Raman characterization of the peroxo and hydroperoxo intermediates in cytochrome P450. J Phys Chem A 112:13172-13179
-
(2008)
J Phys Chem A
, vol.112
, pp. 13172-13179
-
-
Denisov, I.G.1
Mak, P.J.2
Makris, T.M.3
Sligar, S.G.4
Kincaid, J.R.5
-
70
-
-
0037044754
-
Formation and decay of hydroperoxo-ferric heme complex in horseradish peroxidase studied by cryoradiolysis
-
Denisov IG, Makris TM, Sligar SG (2002) Formation and decay of hydroperoxo-ferric heme complex in horseradish peroxidase studied by cryoradiolysis. J Biol Chem 277: 42706-42710
-
(2002)
J Biol Chem
, vol.277
, pp. 42706-42710
-
-
Denisov, I.G.1
Makris, T.M.2
Sligar, S.G.3
-
71
-
-
34249044773
-
Resonance Raman detection of the hydroperoxo intermediate in the cytochrome P450 enzymatic cycle
-
Mak PJ, Denisov IG, Victoria D, Makris TM, Deng T, Sligar SG, Kincaid JR (2007) Resonance Raman detection of the hydroperoxo intermediate in the cytochrome P450 enzymatic cycle. J Am Chem Soc 129:6382-6383
-
(2007)
J Am Chem Soc
, vol.129
, pp. 6382-6383
-
-
Mak, P.J.1
Denisov, I.G.2
Victoria, D.3
Makris, T.M.4
Deng, T.5
Sligar, S.G.6
Kincaid, J.R.7
-
72
-
-
50649119890
-
Resonance Raman spectroscopic studies of hydroperoxo derivatives of cobalt-substituted myoglobin
-
Mak PJ, Kincaid JR (2008) Resonance Raman spectroscopic studies of hydroperoxo derivatives of cobalt-substituted myoglobin. J Inorg Biochem 102:1952-1957
-
(2008)
J Inorg Biochem
, vol.102
, pp. 1952-1957
-
-
Mak, P.J.1
Kincaid, J.R.2
-
74
-
-
1842842895
-
Mechanistic enzymology of oxygen activation by the cytochromes P450
-
Makris TM, Davydov R, Denisov IG, Hoffman BM, Sligar SG (2002) Mechanistic enzymology of oxygen activation by the cytochromes P450. Drug Metab Rev 34:691-708
-
(2002)
Drug Metab Rev
, vol.34
, pp. 691-708
-
-
Makris, T.M.1
Davydov, R.2
Denisov, I.G.3
Hoffman, B.M.4
Sligar, S.G.5
-
75
-
-
37049036930
-
Alteration of P450 distal pocket solvent leads to impaired proton delivery and changes in heme geometry
-
Makris TM, Von Koenig K, Schlichting I, Sligar SG (2007) Alteration of P450 distal pocket solvent leads to impaired proton delivery and changes in heme geometry. Biochemistry 46:14129-14140
-
(2007)
Biochemistry
, vol.46
, pp. 14129-14140
-
-
Makris, T.M.1
Von Koenig, K.2
Schlichting, I.3
Sligar, S.G.4
-
76
-
-
0018662450
-
Intermediate spin-states in one-electron reduction of oxygen-hemoprotein complexes at low temperature
-
Gasyna Z (1979) Intermediate spin-states in one-electron reduction of oxygen-hemoprotein complexes at low temperature. FEBS Lett 106:213-218
-
(1979)
FEBS Lett
, vol.106
, pp. 213-218
-
-
Gasyna, Z.1
-
77
-
-
0035853766
-
Cryotrapped reaction intermediates of cytochrome P450 studied by radiolytic reduction with phosphorus-32
-
Denisov IG, Makris TM, Sligar SG (2001) Cryotrapped reaction intermediates of cytochrome P450 studied by radiolytic reduction with phosphorus-32. J Biol Chem 276: 11648-11652
-
(2001)
J Biol Chem
, vol.276
, pp. 11648-11652
-
-
Denisov, I.G.1
Makris, T.M.2
Sligar, S.G.3
-
79
-
-
0242490629
-
Resonance Raman spectroscopic studies of hydroperoxo-myoglobin at cryogenic temperatures
-
Ibrahim M, Denisov IG, Makris TM, Kincaid JR, Sligar SG (2003) Resonance Raman spectroscopic studies of hydroperoxo-myoglobin at cryogenic temperatures. J Am Chem Soc 125:13714-13718
-
(2003)
J Am Chem Soc
, vol.125
, pp. 13714-13718
-
-
Ibrahim, M.1
Denisov, I.G.2
Makris, T.M.3
Kincaid, J.R.4
Sligar, S.G.5
-
80
-
-
3342976343
-
Spectroscopic studies of peroxo/hydroperoxo derivatives of heme proteins and model compounds
-
Ibrahim M, Kincaid JR (2004) Spectroscopic studies of peroxo/hydroperoxo derivatives of heme proteins and model compounds. J Porphyrins Phthalocyanines 8:215-225
-
(2004)
J Porphyrins Phthalocyanines
, vol.8
, pp. 215-225
-
-
Ibrahim, M.1
Kincaid, J.R.2
-
81
-
-
27544483600
-
Thirty years of microbial P450 monooxygenase research: Peroxo-heme intermediates: The central bus station in heme oxygenase catalysis
-
Sligar SG, Makris TM, Denisov IG (2005) Thirty years of microbial P450 monooxygenase research: Peroxo-heme intermediates: the central bus station in heme oxygenase catalysis. Biochem Biophys Res Commun 338:346-354
-
(2005)
Biochem Biophys Res Commun
, vol.338
, pp. 346-354
-
-
Sligar, S.G.1
Makris, T.M.2
Denisov, I.G.3
-
83
-
-
0028439161
-
Three decades of spectroscopic studies of radiation produced intermediates
-
Schuler RH (1994) Three decades of spectroscopic studies of radiation produced intermediates. Radiat Phys Chem 43:417-423
-
(1994)
Radiat Phys Chem
, vol.43
, pp. 417-423
-
-
Schuler, R.H.1
-
84
-
-
0018067115
-
Protein fractionation at subzero temperatures
-
Douzou P, Balny C (1978) Protein fractionation at subzero temperatures. Adv Protein Chem 32:77-189
-
(1978)
Adv Protein Chem
, vol.32
, pp. 77-189
-
-
Douzou, P.1
Balny, C.2
-
85
-
-
0018706915
-
Fast photochemical reactions of cytochrome P450 at subzero temperatures
-
Bonfils C, Saldana JL, Debey P, Maurel P, Balny C, Douzou P (1979) Fast photochemical reactions of cytochrome P450 at subzero temperatures. Biochimie 61:681-687
-
(1979)
Biochimie
, vol.61
, pp. 681-687
-
-
Bonfils, C.1
Saldana, J.L.2
Debey, P.3
Maurel, P.4
Balny, C.5
Douzou, P.6
-
86
-
-
0020460855
-
Developments in low-temperature biochemistry and biology
-
Douzou P (1982) Developments in low-temperature biochemistry and biology. Proc R Soc Lond B 217:1-28
-
(1982)
Proc R Soc Lond B
, vol.217
, pp. 1-28
-
-
Douzou, P.1
-
87
-
-
0020842817
-
Cryoenzymology
-
Douzou P (1983) Cryoenzymology. Cryobiology 20:625-635
-
(1983)
Cryobiology
, vol.20
, pp. 625-635
-
-
Douzou, P.1
-
88
-
-
0031784421
-
Enzyme activity below the dynamical transition at 220 K
-
Daniel RM, Smith JC, Ferrand M, Hery S, Dunn R, Finney JL (1998) Enzyme activity below the dynamical transition at 220 K. Biophys J 75:2504-2507
-
(1998)
Biophys J
, vol.75
, pp. 2504-2507
-
-
Daniel, R.M.1
Smith, J.C.2
Ferrand, M.3
Hery, S.4
Dunn, R.5
Finney, J.L.6
-
89
-
-
0019324097
-
Unusual spin-state transitions in the reduction of ferrylmyoglobin at low temperature
-
Gasyna Z (1980) Unusual spin-state transitions in the reduction of ferrylmyoglobin at low temperature. Biochem Biophys Res Comm 93:637-644
-
(1980)
Biochem Biophys Res Comm
, vol.93
, pp. 637-644
-
-
Gasyna, Z.1
-
90
-
-
0024278382
-
Low-temperature magnetic circular dichroism studies of the photoreaction of horseradish peroxidase compound i
-
Gasyna Z, Browett WR, Stillman MJ (1988) Low-temperature magnetic circular dichroism studies of the photoreaction of horseradish peroxidase compound I. Biochemistry 27: 2503-2509
-
(1988)
Biochemistry
, vol.27
, pp. 2503-2509
-
-
Gasyna, Z.1
Browett, W.R.2
Stillman, M.J.3
-
91
-
-
33845280352
-
Temperature dependence and electronic transition energies in the magnetic circular dichroism spectrum of horeseradish peroxidase compound i
-
Browett WR, Gasyna Z, Stillman MJ (1988) Temperature dependence and electronic transition energies in the magnetic circular dichroism spectrum of horeseradish peroxidase compound I. J Am Chem Soc 110: 3633-3640
-
(1988)
J Am Chem Soc
, vol.110
, pp. 3633-3640
-
-
Browett, W.R.1
Gasyna, Z.2
Stillman, M.J.3
-
92
-
-
0026030203
-
Conformational relaxation of a low-temperature protein as probed by photochemical hole burning.Horseradish peroxidase
-
Zollfrank J, Friedrich J, Vanderkooi JM, Fidy J (1991) Conformational relaxation of a low-temperature protein as probed by photochemical hole burning.Horseradish peroxidase. Biophys J 59:305-312
-
(1991)
Biophys J
, vol.59
, pp. 305-312
-
-
Zollfrank, J.1
Friedrich, J.2
Vanderkooi, J.M.3
Fidy, J.4
-
93
-
-
0001590073
-
The effects of protein environment on the low temperature electronic spectroscopy of cytochrome c and microperoxidase-11
-
Manas ES, Vanderkooi JM, Sharp KA (1999) The effects of protein environment on the low temperature electronic spectroscopy of cytochrome c and microperoxidase-11. J Phys Chem 103B:6334-6348
-
(1999)
J Phys Chem
, vol.103 B
, pp. 6334-6348
-
-
Manas, E.S.1
Vanderkooi, J.M.2
Sharp, K.A.3
-
94
-
-
0036678070
-
Mixed trehalose/sucrose glasses used for protein incorporation as studied by infrared and optical spectroscopy
-
Wright WW, Carlos Baez J, Vanderkooi JM (2002) Mixed trehalose/sucrose glasses used for protein incorporation as studied by infrared and optical spectroscopy. Anal Biochem 307:167-172
-
(2002)
Anal Biochem
, vol.307
, pp. 167-172
-
-
Wright, W.W.1
Carlos Baez, J.2
Vanderkooi, J.M.3
-
95
-
-
0242330741
-
Accessibility of oxygen with respect to the heme pocket in horseradish peroxidase
-
Khajehpour M, Rietveld I, Vinogradov S, Prabhu NV, Sharp KA, Vanderkooi JM (2003) Accessibility of oxygen with respect to the heme pocket in horseradish peroxidase. Proteins 53:656-666
-
(2003)
Proteins
, vol.53
, pp. 656-666
-
-
Khajehpour, M.1
Rietveld, I.2
Vinogradov, S.3
Prabhu, N.V.4
Sharp, K.A.5
Vanderkooi, J.M.6
-
96
-
-
10944261571
-
Liquid and ice water and glycerol/water glasses compared by infrared spectroscopy from 295 to 12 K
-
Zelent B, Nucci NV, Vanderkooi JM (2004) Liquid and ice water and glycerol/water glasses compared by infrared spectroscopy from 295 to 12 K. J Phys Chem A 108: 11141-11150
-
(2004)
J Phys Chem A
, vol.108
, pp. 11141-11150
-
-
Zelent, B.1
Nucci, N.V.2
Vanderkooi, J.M.3
-
97
-
-
4644291448
-
Flexibility in proteins: Tuning the sensitivity to O2 diffusion by varying the lifetime of a phosphorescent sensor in horseradish peroxidase
-
Nibbs J, Vinogradov SA, Vanderkooi JM, Zelent B (2004) Flexibility in proteins: tuning the sensitivity to O2 diffusion by varying the lifetime of a phosphorescent sensor in horseradish peroxidase. Photochem Photobiol 80:36-40
-
(2004)
Photochem Photobiol
, vol.80
, pp. 36-40
-
-
Nibbs, J.1
Vinogradov, S.A.2
Vanderkooi, J.M.3
Zelent, B.4
-
98
-
-
34247578311
-
Experiments with proteins at low temperature: What do we learn on properties in their functional state?
-
Ponkratov VV, Wiedersich J, Friedrich J, Vanderkooi JM (2007) Experiments with proteins at low temperature: what do we learn on properties in their functional state? J Chem Phys 126:16510-16514
-
(2007)
J Chem Phys
, vol.126
, pp. 16510-16514
-
-
Ponkratov, V.V.1
Wiedersich, J.2
Friedrich, J.3
Vanderkooi, J.M.4
-
99
-
-
0016828929
-
Dynamics of ligand binding to myoglobin
-
Austin RH, Beeson KW, Eisenstein L, Frauenfelder H, Gunsalus IC (1975) Dynamics of ligand binding to myoglobin. Biochemistry 14:5355-5373
-
(1975)
Biochemistry
, vol.14
, pp. 5355-5373
-
-
Austin, R.H.1
Beeson, K.W.2
Eisenstein, L.3
Frauenfelder, H.4
Gunsalus, I.C.5
-
100
-
-
0026320866
-
The energy landscapes and motions of proteins
-
Frauenfelder H, Sligar SG, Wolynes PG (1991) The energy landscapes and motions of proteins. Science 254:1598-1603
-
(1991)
Science
, vol.254
, pp. 1598-1603
-
-
Frauenfelder, H.1
Sligar, S.G.2
Wolynes, P.G.3
-
101
-
-
58049186283
-
Protein fluctuations explored by inelastic neutron scattering and dielectric relaxation spectroscopy
-
Chen G, Fenimore PW, Frauenfelder H, Mezei F, Swenson J, Young RD (2008) Protein fluctuations explored by inelastic neutron scattering and dielectric relaxation spectroscopy. Phil Mag 88:3877-3883
-
(2008)
Phil Mag
, vol.88
, pp. 3877-3883
-
-
Chen, G.1
Fenimore, P.W.2
Frauenfelder, H.3
Mezei, F.4
Swenson, J.5
Young, R.D.6
-
103
-
-
0020758694
-
Subzero temperature quenching and electrophoretic methods for the isolation of protein reaction intermediates
-
Perrella M, Benazzi L, Cremonesi L, Vesely S, Viggiano G, Berger RL (1983) Subzero temperature quenching and electrophoretic methods for the isolation of protein reaction intermediates. J Biochem Biophys Meth 7: 187-197
-
(1983)
J Biochem Biophys Meth
, vol.7
, pp. 187-197
-
-
Perrella, M.1
Benazzi, L.2
Cremonesi, L.3
Vesely, S.4
Viggiano, G.5
Berger, R.L.6
-
104
-
-
0029050152
-
Low-temperature electrophoresis methods
-
Perrella M, Denisov I (1995) Low-temperature electrophoresis methods. Meth Enzymol 259:468-487
-
(1995)
Meth Enzymol
, vol.259
, pp. 468-487
-
-
Perrella, M.1
Denisov, I.2
-
105
-
-
0016669532
-
Low temperature column chromatography: Application to microsomal hydroxylating system
-
Balny C, Le Peuch C, Debey P (1975) Low temperature column chromatography: application to microsomal hydroxylating system. Anal Biochem 63:321-330
-
(1975)
Anal Biochem
, vol.63
, pp. 321-330
-
-
Balny, C.1
Le Peuch, C.2
Debey, P.3
-
106
-
-
0017150920
-
The subzero temperature chromatographic isolation of transient intermediates of a multi-step cycle: Preparation of the substrate-free oxy-ferrous cytochrome P450
-
Balny C, Debey P, Douzou P (1976) The subzero temperature chromatographic isolation of transient intermediates of a multi-step cycle: preparation of the substrate-free oxy-ferrous cytochrome P450. FEBS Lett 69:236-239
-
(1976)
FEBS Lett
, vol.69
, pp. 236-239
-
-
Balny, C.1
Debey, P.2
Douzou, P.3
|