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Volumn 157, Issue 9, 2012, Pages 1729-1739

Molecular and phylogenetic analysis of the HPV 16 E4 gene in cervical lesions from women in Greece

Author keywords

[No Author keywords available]

Indexed keywords

ONCOGENE PROTEIN E4, HUMAN PAPILLOMAVIRUS TYPE 16; ONCOPROTEIN; VIRUS DNA;

EID: 84865720463     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-012-1356-1     Document Type: Article
Times cited : (14)

References (45)
  • 1
    • 77950938389 scopus 로고    scopus 로고
    • Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments
    • Bernard HU, Burk RD, Chen Z, van Doorslaer K, Hausen H, de Villiers EM (2010) Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments. Virology 401: 70-79.
    • (2010) Virology , vol.401 , pp. 70-79
    • Bernard, H.U.1    Burk, R.D.2    Chen, Z.3    van Doorslaer, K.4    Hausen, H.5    de Villiers, E.M.6
  • 4
    • 78650324137 scopus 로고    scopus 로고
    • Cervical human papillomavirus prevalence in 5 continents: meta-analysis of 1 million women with normal cytological findings
    • Bruni L, Diaz M, Castellsagué X, Ferrer E, Bosch FX, de Sanjosé S (2010) Cervical human papillomavirus prevalence in 5 continents: meta-analysis of 1 million women with normal cytological findings. J Infect Dis 202: 1789-1799.
    • (2010) J Infect Dis , vol.202 , pp. 1789-1799
    • Bruni, L.1    Diaz, M.2    Castellsagué, X.3    Ferrer, E.4    Bosch, F.X.5    de Sanjosé, S.6
  • 7
    • 0031052028 scopus 로고    scopus 로고
    • Human papillomavirus type 16 sequence variation in cervical cancers: a worldwide perspective
    • Yamada T, Manos MM, Peto J, Greer CE, Munoz N, Bosch FX, Wheeler CM (1997) Human papillomavirus type 16 sequence variation in cervical cancers: a worldwide perspective. J Virol 71: 2463-2472.
    • (1997) J Virol , vol.71 , pp. 2463-2472
    • Yamada, T.1    Manos, M.M.2    Peto, J.3    Greer, C.E.4    Munoz, N.5    Bosch, F.X.6    Wheeler, C.M.7
  • 8
    • 0028809841 scopus 로고
    • Human papillomavirus type 16 variant lineages in United States populations characterized by nucleotide sequence analysis of the E6, L2, and L1 coding segments
    • Yamada T, Wheeler CM, Halpern AL, Stewart AC, Hildesheim A, Jenison SA (1995) Human papillomavirus type 16 variant lineages in United States populations characterized by nucleotide sequence analysis of the E6, L2, and L1 coding segments. J Virol 69: 7743-7753.
    • (1995) J Virol , vol.69 , pp. 7743-7753
    • Yamada, T.1    Wheeler, C.M.2    Halpern, A.L.3    Stewart, A.C.4    Hildesheim, A.5    Jenison, S.A.6
  • 9
    • 0031060050 scopus 로고    scopus 로고
    • Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineage-specific hybridization
    • Wheeler CM, Yamada T, Hildesheim A, Jenison SA (1997) Human papillomavirus type 16 sequence variants: identification by E6 and L1 lineage-specific hybridization. J Clin Microbiol 35: 11-19.
    • (1997) J Clin Microbiol , vol.35 , pp. 11-19
    • Wheeler, C.M.1    Yamada, T.2    Hildesheim, A.3    Jenison, S.A.4
  • 12
    • 0032990383 scopus 로고    scopus 로고
    • Human papillomavirus type 16 variant lineages characterised by nucleotide sequence analysis of the E5 coding segment and the E2 hinge region
    • Eriksson A, Herron JR, Yamada T, Wheeler CM (1999) Human papillomavirus type 16 variant lineages characterised by nucleotide sequence analysis of the E5 coding segment and the E2 hinge region. J Gen Virol 80: 595-600.
    • (1999) J Gen Virol , vol.80 , pp. 595-600
    • Eriksson, A.1    Herron, J.R.2    Yamada, T.3    Wheeler, C.M.4
  • 14
    • 79959283360 scopus 로고    scopus 로고
    • Clinical evaluation of polymerase chain reaction reverse hybridization assay for detection and identification of human papillomavirus type 16 variants
    • Sanchez GI, Kleter B, Gheit T, van Doorn LJ, de Koning MN, de Sanjosé S et al (2011) Clinical evaluation of polymerase chain reaction reverse hybridization assay for detection and identification of human papillomavirus type 16 variants. J Clin Virol 51: 165-169.
    • (2011) J Clin Virol , vol.51 , pp. 165-169
    • Sanchez, G.I.1    Kleter, B.2    Gheit, T.3    van Doorn, L.J.4    de Koning, M.N.5    de Sanjosé, S.6
  • 15
    • 79952817282 scopus 로고    scopus 로고
    • Human papillomavirus (HPV) genotypes and HPV16 variants and risk of adenocarcinoma and squamous cell carcinoma of the cervix
    • Tornesello ML, Losito S, Benincasa G, Fulciniti F, Botti G, Greggi S et al (2011) Human papillomavirus (HPV) genotypes and HPV16 variants and risk of adenocarcinoma and squamous cell carcinoma of the cervix. Gynecol Oncol 121: 32-42.
    • (2011) Gynecol Oncol , vol.121 , pp. 32-42
    • Tornesello, M.L.1    Losito, S.2    Benincasa, G.3    Fulciniti, F.4    Botti, G.5    Greggi, S.6
  • 16
    • 69249128732 scopus 로고    scopus 로고
    • Molecular mechanisms of human papillomavirus-induced carcinogenesis
    • Lehoux M, D'Abramo CM, Archambault J (2009) Molecular mechanisms of human papillomavirus-induced carcinogenesis. Public Health Genomics. 12: 268-280.
    • (2009) Public Health Genomics. , vol.12 , pp. 268-280
    • Lehoux, M.1    D'Abramo, C.M.2    Archambault, J.3
  • 17
    • 34347339667 scopus 로고    scopus 로고
    • Papillomavirus life cycle organization and biomarker selection
    • Doorbar J (2007) Papillomavirus life cycle organization and biomarker selection. Dis Markers 23: 297-313.
    • (2007) Dis Markers , vol.23 , pp. 297-313
    • Doorbar, J.1
  • 18
    • 31144456195 scopus 로고    scopus 로고
    • HPV-mediated cervical carcinogenesis: concepts and clinical implications
    • Snijders PJ, Steenbergen RD, Heideman DA, Meijer CJ (2006) HPV-mediated cervical carcinogenesis: concepts and clinical implications. J Pathol 208: 152-164.
    • (2006) J Pathol , vol.208 , pp. 152-164
    • Snijders, P.J.1    Steenbergen, R.D.2    Heideman, D.A.3    Meijer, C.J.4
  • 20
    • 0041967157 scopus 로고    scopus 로고
    • Human papillomaviruses: targeting differentiating epithelial cells for malignant transformation
    • Fehrmann F, Laimins LA (2003) Human papillomaviruses: targeting differentiating epithelial cells for malignant transformation. Oncogene 22: 5201-5207.
    • (2003) Oncogene , vol.22 , pp. 5201-5207
    • Fehrmann, F.1    Laimins, L.A.2
  • 21
    • 52049104181 scopus 로고    scopus 로고
    • HPV-16 RNA processing
    • Schwartz S (2008) HPV-16 RNA processing. Front Biosci 13: 5880-5891.
    • (2008) Front Biosci , vol.13 , pp. 5880-5891
    • Schwartz, S.1
  • 23
    • 0031564066 scopus 로고    scopus 로고
    • Characterization of events during the late stages of HPV16 infection in vivo using high-affinity synthetic Fabs to E4
    • Doorbar J, Foo C, Coleman N, Medcalf L, Hartley O, Prospero T et al (1997) Characterization of events during the late stages of HPV16 infection in vivo using high-affinity synthetic Fabs to E4. Virology 238: 40-52.
    • (1997) Virology , vol.238 , pp. 40-52
    • Doorbar, J.1    Foo, C.2    Coleman, N.3    Medcalf, L.4    Hartley, O.5    Prospero, T.6
  • 24
    • 0141632854 scopus 로고    scopus 로고
    • Organization of human papillomavirus productive cycle during neoplastic progression provides a basis for selection of diagnostic markers
    • Middleton K, Peh W, Southern S, Griffin H, Sotlar K, Nakahara T et al (2003) Organization of human papillomavirus productive cycle during neoplastic progression provides a basis for selection of diagnostic markers. J Virol 77: 10186-10201.
    • (2003) J Virol , vol.77 , pp. 10186-10201
    • Middleton, K.1    Peh, W.2    Southern, S.3    Griffin, H.4    Sotlar, K.5    Nakahara, T.6
  • 25
    • 84919845342 scopus 로고    scopus 로고
    • Human papillomavirus RNA transcription
    • R. L. Garcea and D. DiMaio (Eds.), New York: Springer
    • Chow LT, Broker TR (2007) Human papillomavirus RNA transcription. In: Garcea RL, DiMaio D (eds) The Papillomaviruses. Springer, New York, pp 109-144.
    • (2007) The Papillomaviruses , pp. 109-144
    • Chow, L.T.1    Broker, T.R.2
  • 26
    • 0000557446 scopus 로고    scopus 로고
    • Papillomavirinae: the viruses and their replication
    • 3rd edn., B. N. Fields, D. M. Knipe, and P. M. Howley (Eds.), Philadelphia: Lippincott-Raven
    • Howley PM (1996) Papillomavirinae: the viruses and their replication. In: Fields BN, Knipe DM, Howley PM (eds) Fields virology, 3rd edn. Lippincott-Raven, Philadelphia, pp 2045-2076.
    • (1996) Fields Virology , pp. 2045-2076
    • Howley, P.M.1
  • 27
    • 77956004466 scopus 로고    scopus 로고
    • E1-E4-mediated keratin phosphorylation and ubiquitylation: a mechanism for keratin depletion in HPV16-infected epithelium
    • McIntosh PB, Laskey P, Sullivan K, Davy C, Wang Q, Jackson DJ, Griffin HM, Doorbar J (2010) E1-E4-mediated keratin phosphorylation and ubiquitylation: a mechanism for keratin depletion in HPV16-infected epithelium. J Cell Sci 123: 2810-2822.
    • (2010) J Cell Sci , vol.123 , pp. 2810-2822
    • McIntosh, P.B.1    Laskey, P.2    Sullivan, K.3    Davy, C.4    Wang, Q.5    Jackson, D.J.6    Griffin, H.M.7    Doorbar, J.8
  • 28
    • 0036776321 scopus 로고    scopus 로고
    • Identification of a G(2) arrest domain in the E1 wedge E4 protein of human papillomavirus type 16
    • Davy CE, Jackson DJ, Wang Q, Raj K, Masterson PJ, Fenner NF et al (2002) Identification of a G(2) arrest domain in the E1 wedge E4 protein of human papillomavirus type 16. J Virol 76: 9806-9818.
    • (2002) J Virol , vol.76 , pp. 9806-9818
    • Davy, C.E.1    Jackson, D.J.2    Wang, Q.3    Raj, K.4    Masterson, P.J.5    Fenner, N.F.6
  • 29
    • 20144380152 scopus 로고    scopus 로고
    • Human papillomavirus type 16 E1 E4-induced G2 arrest is associated with cytoplasmic retention of active Cdk1/cyclin B1 complexes
    • Davy CE, Jackson DJ, Raj K, Peh WL, Southern SA, Das P, Sorathia R et al (2005) Human papillomavirus type 16 E1 E4-induced G2 arrest is associated with cytoplasmic retention of active Cdk1/cyclin B1 complexes. J Virol 79: 3998-4011.
    • (2005) J Virol , vol.79 , pp. 3998-4011
    • Davy, C.E.1    Jackson, D.J.2    Raj, K.3    Peh, W.L.4    Southern, S.A.5    Das, P.6    Sorathia, R.7
  • 30
    • 50949086060 scopus 로고    scopus 로고
    • Identification of an arginine-rich motif in human papillomavirus type 1 E1;E4 protein necessary for E4-mediated inhibition of cellular DNA synthesis in vitro and in cells
    • Roberts S, Kingsbury SR, Stoeber K, Knight GL, Gallimore PH, Williams GH (2008) Identification of an arginine-rich motif in human papillomavirus type 1 E1; E4 protein necessary for E4-mediated inhibition of cellular DNA synthesis in vitro and in cells. J Virol 82: 9056-9064.
    • (2008) J Virol , vol.82 , pp. 9056-9064
    • Roberts, S.1    Kingsbury, S.R.2    Stoeber, K.3    Knight, G.L.4    Gallimore, P.H.5    Williams, G.H.6
  • 31
    • 70449095899 scopus 로고    scopus 로고
    • A novel interaction between the human papillomavirus type 16 E2 and E1-E4 proteins leads to stabilization of E2
    • Davy C, McIntosh P, Jackson DJ, Sorathia R, Miell M, Wang Q, Khan J, Soneji Y, Doorbar J (2009) A novel interaction between the human papillomavirus type 16 E2 and E1-E4 proteins leads to stabilization of E2. Virology 394: 266-275.
    • (2009) Virology , vol.394 , pp. 266-275
    • Davy, C.1    McIntosh, P.2    Jackson, D.J.3    Sorathia, R.4    Miell, M.5    Wang, Q.6    Khan, J.7    Soneji, Y.8    Doorbar, J.9
  • 32
    • 0029014339 scopus 로고
    • New method for the extraction of viral RNA and DNA from cerebrospinal fluid for use in the polymerase chain reaction assay
    • Casas I, Powell L, Klapper PE, Cleator GM (1995) New method for the extraction of viral RNA and DNA from cerebrospinal fluid for use in the polymerase chain reaction assay. J Virol Methods 53: 25-36.
    • (1995) J Virol Methods , vol.53 , pp. 25-36
    • Casas, I.1    Powell, L.2    Klapper, P.E.3    Cleator, G.M.4
  • 33
    • 0029942975 scopus 로고    scopus 로고
    • Polymerase chain reaction amplification of human papillomavirus DNA from archival, Papanicolaou-stained cervical smears
    • Puranen M, Saarikoski S, Syrjänen K, Syrjänen S (1996) Polymerase chain reaction amplification of human papillomavirus DNA from archival, Papanicolaou-stained cervical smears. Acta Cytol 40: 391-395.
    • (1996) Acta Cytol , vol.40 , pp. 391-395
    • Puranen, M.1    Saarikoski, S.2    Syrjänen, K.3    Syrjänen, S.4
  • 34
    • 3142737992 scopus 로고    scopus 로고
    • Detection and typing of human papillomavirus by E6 nested multiplex PCR
    • Sotlar K, Diemer D, Dethleffs A, Hack Y et al (2004) Detection and typing of human papillomavirus by E6 nested multiplex PCR. J Clin Microbiol 42: 3176-3184.
    • (2004) J Clin Microbiol , vol.42 , pp. 3176-3184
    • Sotlar, K.1    Diemer, D.2    Dethleffs, A.3    Hack, Y.4
  • 35
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 36
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32: 1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 37
    • 17744395033 scopus 로고    scopus 로고
    • Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
    • Pond SL, Frost SD (2005) Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21: 2531-2533.
    • (2005) Bioinformatics , vol.21 , pp. 2531-2533
    • Pond, S.L.1    Frost, S.D.2
  • 38
    • 0032849322 scopus 로고    scopus 로고
    • A method for detecting positive selection at single amino acid sites
    • Suzuki Y, Gojobori T (1999) A method for detecting positive selection at single amino acid sites. Mol Biol Evol 16: 1315-1328.
    • (1999) Mol Biol Evol , vol.16 , pp. 1315-1328
    • Suzuki, Y.1    Gojobori, T.2
  • 39
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 40
    • 0001884705 scopus 로고    scopus 로고
    • The E4 protein
    • In: Myers HDG, Icenogelet J (eds) Los Alamos National Laboratory, Los Alamos, NM
    • Doorbar, J and Myers G (1996) The E4 protein. In: Myers HDG, Icenogelet J (eds) Human papillomaviruses, vol. 3. Los Alamos National Laboratory, Los Alamos, NM, pp 58-80.
    • (1996) Human papillomaviruses , vol.3 , pp. 58-80
    • Doorbar, J.1    Myers, G.2
  • 41
    • 0032990383 scopus 로고    scopus 로고
    • Human papillomavirus type 16 variant lineages characterized by nucleotide sequence analysis of the E5 coding segment and the E2 hinge region
    • Eriksson A, Herron JR, Yamada T, Wheeler CM (1999) Human papillomavirus type 16 variant lineages characterized by nucleotide sequence analysis of the E5 coding segment and the E2 hinge region. J Gen Virol 80: 595-600.
    • (1999) J Gen Virol , vol.80 , pp. 595-600
    • Eriksson, A.1    Herron, J.R.2    Yamada, T.3    Wheeler, C.M.4
  • 42
    • 0027936357 scopus 로고
    • Mutational analysis of human papillomavirus E4 proteins: identification of structural features important in the formation of cytoplasmic E4/cytokeratin networks in epithelial cells
    • Roberts S, Ashmole I, Gibson LJ, Rookes SM, Barton GJ, Gallimore PH (1994) Mutational analysis of human papillomavirus E4 proteins: identification of structural features important in the formation of cytoplasmic E4/cytokeratin networks in epithelial cells. J Virol 68: 6432-6445.
    • (1994) J Virol , vol.68 , pp. 6432-6445
    • Roberts, S.1    Ashmole, I.2    Gibson, L.J.3    Rookes, S.M.4    Barton, G.J.5    Gallimore, P.H.6
  • 43
    • 9144271383 scopus 로고    scopus 로고
    • Functional analysis of the human papillomavirus type 16 E1=E4 protein provides a mechanism for in vivo and in vitro keratin filament reorganization
    • Wang Q, Griffin H, Southern S, Jackson D, Martin A et al (2004) Functional analysis of the human papillomavirus type 16 E1=E4 protein provides a mechanism for in vivo and in vitro keratin filament reorganization. J Virol 78: 821-833.
    • (2004) J Virol , vol.78 , pp. 821-833
    • Wang, Q.1    Griffin, H.2    Southern, S.3    Jackson, D.4    Martin, A.5
  • 44
    • 24944520911 scopus 로고    scopus 로고
    • Patterns of nucleotide difference in overlapping and non-overlapping reading frames of papillomavirus genomes
    • Hughes AL, Hughes MA (2005) Patterns of nucleotide difference in overlapping and non-overlapping reading frames of papillomavirus genomes. Virus Res 113: 81-88.
    • (2005) Virus Res , vol.113 , pp. 81-88
    • Hughes, A.L.1    Hughes, M.A.2
  • 45
    • 69249085787 scopus 로고    scopus 로고
    • Human papillomaviruses: genetic basis of carcinogenicity
    • Burk RD, Chen Z, van Doorslaer K (2009) Human papillomaviruses: genetic basis of carcinogenicity. Public Health Genomics 12: 281-290.
    • (2009) Public Health Genomics , vol.12 , pp. 281-290
    • Burk, R.D.1    Chen, Z.2    van Doorslaer, K.3


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