-
1
-
-
84858721114
-
Microvirga lupini sp. nov., Microvirga lotononidis sp. nov., and Microvirga zambiensis sp. nov. are Alphaproteobacterial root nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts
-
in press, doi: 10.1099/ijs.0.035907
-
Ardley, J. K., Parker, M. A., De Meyer, S. E., Trengove, R. D., O'Hara, G. W., Reeve, W. G., Yates, R. J., Dilworth, M. J., Willems, A. and Howieson, J. G. (2011). Microvirga lupini sp. nov., Microvirga lotononidis sp. nov., and Microvirga zambiensis sp. nov. are Alphaproteobacterial root nodule bacteria that specifically nodulate and fix nitrogen with geographically and taxonomically separate legume hosts. Int J Syst Evol Microbiol (in press) doi: 10.1099/ijs.0.035907
-
(2011)
Int J Syst Evol Microbiol
-
-
Ardley, J.K.1
Parker, M.A.2
de Meyer, S.E.3
Trengove, R.D.4
O'Hara, G.W.5
Reeve, W.G.6
Yates, R.J.7
Dilworth, M.J.8
Willems, A.9
Howieson, J.G.10
-
2
-
-
33746197428
-
Adaptive linear step-up procedures that control the false discovery rate
-
Benjamini, Y., Krieger, A. M. and Yekutieli, D. (2006). Adaptive linear step-up procedures that control the false discovery rate. Biometrika 93, 491-507.
-
(2006)
Biometrika
, vol.93
, pp. 491-507
-
-
Benjamini, Y.1
Krieger, A.M.2
Yekutieli, D.3
-
3
-
-
34249898934
-
Legumes symbioses: Absence of Nod genes in photosynthetic bradyrhizobia
-
and other authors
-
Giraud, E., Moulin, L., Vallenet, D., Barbe, V., Cytryn, E., Avarre, J.-C., Jaubert, M., Simon, D., Cartieaux, F. and other authors (2007).Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia. Science 316, 1307-1312.
-
(2007)
Science
, vol.316
, pp. 1307-1312
-
-
Giraud, E.1
Moulin, L.2
Vallenet, D.3
Barbe, V.4
Cytryn, E.5
Avarre, J.-C.6
Jaubert, M.7
Simon, D.8
Cartieaux, F.9
-
4
-
-
0023497078
-
Tropical American tertiary floras and paleoenvironments: Mexico, Costa Rica, and Panama
-
Graham, A. (1987). Tropical American tertiary floras and paleoenvironments: Mexico, Costa Rica, and Panama. Am J Bot 74, 1519-1531.
-
(1987)
Am J Bot
, vol.74
, pp. 1519-1531
-
-
Graham, A.1
-
5
-
-
80054737011
-
Legume-nodulating betaproteobacteria: Diversity, host range, and future prospects
-
and other authors
-
Gyaneshwar, P., Hirsch, A. M., Moulin, L., Chen, W.-M., Elliott, G. N., Bontemps, C., Estrada-de Los Santos, P., Gross, E., Dos Reis, F. B. and other authors (2011). Legume-nodulating betaproteobacteria: diversity, host range, and future prospects. Mol Plant Microbe Interact 24, 1276-1288.
-
(2011)
Mol Plant Microbe Interact
, vol.24
, pp. 1276-1288
-
-
Gyaneshwar, P.1
Hirsch, A.M.2
Moulin, L.3
Chen, W.-M.4
Elliott, G.N.5
Bontemps, C.6
Santos, P.7
Gross, E.8
Dos, R.F.B.9
-
6
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson, D. H. and Bryant, D. (2006). Application of phylogenetic networks in evolutionary studies. Mol Biol Evol 23, 254-267.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
7
-
-
77955018899
-
Adephylo: New tools for investigating the phylogenetic signal in biological traits
-
Jombart, T., Balloux, F. and Dray, S. (2010). Adephylo: new tools for investigating the phylogenetic signal in biological traits. Bioinformatics 26, 1907-1909.
-
(2010)
Bioinformatics
, vol.26
, pp. 1907-1909
-
-
Jombart, T.1
Balloux, F.2
Dray, S.3
-
8
-
-
0034794587
-
RbcL and legume phylogeny, with particular reference to Phaseoleae, Millettieae, and allies
-
Kajita, T., Ohashi, H., Tateishi, Y., Bailey, C. D. and Doyle, J. J. (2001). rbcL and legume phylogeny, with particular reference to Phaseoleae, Millettieae, and allies. Syst Bot 26, 515-536.
-
(2001)
Syst Bot
, vol.26
, pp. 515-536
-
-
Kajita, T.1
Ohashi, H.2
Tateishi, Y.3
Bailey, C.D.4
Doyle, J.J.5
-
9
-
-
0036928484
-
Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110
-
and other authors
-
Kaneko, T., Nakamura, Y., Sato, S., Minamisawa, K., Uchiumi, T., Sasamoto, S., Watanabe, A., Idesawa, K., Iriguchi, M. and other authors (2002). Complete genomic sequence of nitrogen-fixing symbiotic bacterium Bradyrhizobium japonicum USDA110. DNA Res 9, 189-197.
-
(2002)
DNA Res
, vol.9
, pp. 189-197
-
-
Kaneko, T.1
Nakamura, Y.2
Sato, S.3
Minamisawa, K.4
Uchiumi, T.5
Sasamoto, S.6
Watanabe, A.7
Idesawa, K.8
Iriguchi, M.9
-
10
-
-
0012770386
-
-
Kew, UK: Royal Botanic Gardens
-
Lewis, G., Schrire, B., Mackinder, B. and Lock, M. (2005). Legumes of the world. Kew, UK: Royal Botanic Gardens.
-
(2005)
Legumes of the World
-
-
Lewis, G.1
Schrire, B.2
Mackinder, B.3
Lock, M.4
-
11
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado, P. and Rozas, J. (2009). DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25, 1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
12
-
-
10744219797
-
Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus
-
Moulin, L. G., Béna, G., Boivin-Masson, C. and Stepkowski, T. (2004). Phylogenetic analyses of symbiotic nodulation genes support vertical and lateral gene co-transfer within the Bradyrhizobium genus. Mol Phylogenet Evol 30, 720-732.
-
(2004)
Mol Phylogenet Evol
, vol.30
, pp. 720-732
-
-
Moulin, L.G.1
Béna, G.2
Boivin-Masson, C.3
Stepkowski, T.4
-
13
-
-
67651154113
-
Multilocus sequence analysis of bradyrhizobia isolated from Aeschynomene species in Senegal
-
Nzoué, A., Miché, L., Klonowska, A., Laguerre, G., de Lajudie, P. and Moulin, L. (2009). Multilocus sequence analysis of bradyrhizobia isolated from Aeschynomene species in Senegal. Syst Appl Microbiol 32, 400-412.
-
(2009)
Syst Appl Microbiol
, vol.32
, pp. 400-412
-
-
Nzoué, A.1
Miché, L.2
Klonowska, A.3
Laguerre, G.4
de Lajudie, P.5
Moulin, L.6
-
14
-
-
0032755260
-
Relationships of bradyrhizobia from the legumes Apios americana and Desmodium glutinosum
-
Parker, M. A. (1999). Relationships of bradyrhizobia from the legumes Apios americana and Desmodium glutinosum. Appl Environ Microbiol 65, 4914-4920.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 4914-4920
-
-
Parker, M.A.1
-
15
-
-
0036211217
-
Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern Mexico
-
Parker, M. A. (2002). Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern Mexico. Appl Environ Microbiol 68, 2044-2048.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 2044-2048
-
-
Parker, M.A.1
-
16
-
-
0041874641
-
Genetic markers for analysing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia
-
Parker, M. A. (2003). Genetic markers for analysing symbiotic relationships and lateral gene transfer in Neotropical bradyrhizobia. Mol Ecol 12, 2447-2455.
-
(2003)
Mol Ecol
, vol.12
, pp. 2447-2455
-
-
Parker, M.A.1
-
17
-
-
2642587193
-
RRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four papilionoid legume trees in Costa Rica
-
Parker, M. A. (2004). RRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four papilionoid legume trees in Costa Rica. Syst Appl Microbiol 27, 334-342.
-
(2004)
Syst Appl Microbiol
, vol.27
, pp. 334-342
-
-
Parker, M.A.1
-
18
-
-
42649119777
-
Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: A review
-
Parker, M. A. (2008). Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: a review. Microb Ecol 55, 662-672.
-
(2008)
Microb Ecol
, vol.55
, pp. 662-672
-
-
Parker, M.A.1
-
19
-
-
84859102885
-
Legumes select symbiosis island sequence variants in Bradyrhizobium
-
Parker, M. A. (2012). Legumes select symbiosis island sequence variants in Bradyrhizobium. Mol Ecol 21, 1769-1778.
-
(2012)
Mol Ecol
, vol.21
, pp. 1769-1778
-
-
Parker, M.A.1
-
20
-
-
0036667447
-
Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium
-
Parker, M. A., Lafay, B., Burdon, J. J. and van Berkum, P. (2002). Conflicting phylogeographic patterns in rRNA and nifD indicate regionally restricted gene transfer in Bradyrhizobium. Microbiology 148, 2557-2565.
-
(2002)
Microbiology
, vol.148
, pp. 2557-2565
-
-
Parker, M.A.1
Lafay, B.2
Burdon, J.J.3
van Berkum, P.4
-
21
-
-
70349316720
-
Bradyrhizobium pachyrhizi sp. nov. and Bradyrhizobium jicamae sp. nov., isolated from effective nodules of Pachyrhizus erosus
-
Ramírez-Bahena, M. H., Peix, A., Rivas, R., Camacho, M., RodríguezNavarro, D. N., Mateos, P. F., Martínez-Molina, E., Willems, A. and Velázquez, E. (2009). Bradyrhizobium pachyrhizi sp. nov. and Bradyrhizobium jicamae sp. nov., isolated from effective nodules of Pachyrhizus erosus. Int J Syst Evol Microbiol 59, 1929-1934.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 1929-1934
-
-
Ramírez-Bahena, M.H.1
Peix, A.2
Rivas, R.3
Camacho, M.4
Rodrígueznavarro, D.N.5
Mateos, P.F.6
Martínez-Molina, E.7
Willems, A.8
Velázquez, E.9
-
22
-
-
59649085740
-
Multilocus sequence analysis of the genus Bradyrhizobium
-
Rivas, R., Martens, M., de Lajudie, P. and Willems, A. (2009). Multilocus sequence analysis of the genus Bradyrhizobium. Syst Appl Microbiol 32, 101-110.
-
(2009)
Syst Appl Microbiol
, vol.32
, pp. 101-110
-
-
Rivas, R.1
Martens, M.2
de Lajudie, P.3
Willems, A.4
-
23
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist, F. and Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19, 1572-1574.
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
24
-
-
67650498128
-
In situ phylogenetic structure and diversity of wild Bradyrhizobium communities
-
Sachs, J. L., Kembel, S. W., Lau, A. H. and Simms, E. L. (2009). In situ phylogenetic structure and diversity of wild Bradyrhizobium communities. Appl Environ Microbiol 75, 4727-4735.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 4727-4735
-
-
Sachs, J.L.1
Kembel, S.W.2
Lau, A.H.3
Simms, E.L.4
-
25
-
-
34249728324
-
Diversification of lupine Bradyrhizobium strains: Evidence from nodulation gene trees
-
Stepkowski, T., Hughes, C. E., Law, I. J., Markiewicz, L., Gurda, D., Chlebicka, A. and Moulin, L. (2007). Diversification of lupine Bradyrhizobium strains: evidence from nodulation gene trees. Appl Environ Microbiol 73, 3254-3264.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 3254-3264
-
-
Stepkowski, T.1
Hughes, C.E.2
Law, I.J.3
Markiewicz, L.4
Gurda, D.5
Chlebicka, A.6
Moulin, L.7
-
26
-
-
84858071010
-
Distinct Bradyrhizbium communities nodulate legumes native to temperate and tropical monsoon Australia
-
Stepkowski, T., Watkin, E., McInnes, A., Gurda, D., Gracz, J. and Steenkamp, E. T. (2012). Distinct Bradyrhizbium communities nodulate legumes native to temperate and tropical monsoon Australia. Mol Phylogenet Evol 63, 265-277.
-
(2012)
Mol Phylogenet Evol
, vol.63
, pp. 265-277
-
-
Stepkowski, T.1
Watkin, E.2
McInnes, A.3
Gurda, D.4
Gracz, J.5
Steenkamp, E.T.6
-
27
-
-
9944222667
-
Population genetics and phylogenetic inference in bacterial molecular systematics: The roles of migration and recombination in Bradyrhizobium species cohesion and delineation
-
Vinuesa, P., Silva, C., Werner, D. and Martínez-Romero, E. (2005). Population genetics and phylogenetic inference in bacterial molecular systematics: the roles of migration and recombination in Bradyrhizobium species cohesion and delineation. Mol Phylogenet Evol 34, 29-54.
-
(2005)
Mol Phylogenet Evol
, vol.34
, pp. 29-54
-
-
Vinuesa, P.1
Silva, C.2
Werner, D.3
Martínez-Romero, E.4
-
28
-
-
55949127176
-
Multilocus sequence analysis for assessment of the biogeography and evolutionary genetics of four Bradyrhizobium species that nodulate soybeans on the asiatic continent
-
Vinuesa, P., Rojas-Jiménez, K., Contreras-Moreira, B., Mahna, S. K., Prasad, B. N., Moe, H., Selvaraju, S. B., Thierfelder, H. and Werner, D. (2008). Multilocus sequence analysis for assessment of the biogeography and evolutionary genetics of four Bradyrhizobium species that nodulate soybeans on the asiatic continent. Appl Environ Microbiol 74, 6987-6996.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6987-6996
-
-
Vinuesa, P.1
Rojas-Jiménez, K.2
Contreras-Moreira, B.3
Mahna, S.K.4
Prasad, B.N.5
Moe, H.6
Selvaraju, S.B.7
Thierfelder, H.8
Werner, D.9
-
29
-
-
51749095104
-
Phylocom: Software for the analysis of phylogenetic community structure and trait evolution
-
Webb, C. O., Ackerly, D. D. and Kembel, S. W. (2008). Phylocom: software for the analysis of phylogenetic community structure and trait evolution. Bioinformatics 24, 2098-2100.
-
(2008)
Bioinformatics
, vol.24
, pp. 2098-2100
-
-
Webb, C.O.1
Ackerly, D.D.2
Kembel, S.W.3
-
30
-
-
33749537045
-
The taxonomy of rhizobia: An overview
-
Willems, A. (2006). The taxonomy of rhizobia: an overview. Plant Soil 287, 3-14.
-
(2006)
Plant Soil
, vol.287
, pp. 3-14
-
-
Willems, A.1
-
31
-
-
18044370145
-
A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well-supported subclades within the family
-
Wojciechowski, M. F., Lavin, M. and Sanderson, M. J. (2004). A phylogeny of legumes (Leguminosae) based on analysis of the plastid matK gene resolves many well-supported subclades within the family. Am J Bot 91, 1846-1862.
-
(2004)
Am J Bot
, vol.91
, pp. 1846-1862
-
-
Wojciechowski, M.F.1
Lavin, M.2
Sanderson, M.J.3
|