-
1
-
-
0033306309
-
Phylogenetic analyses of Bradyrhizobium strains nodulating soybean (Glycine max) in Thailand with reference to the USDA strains of Bradyrhizobium
-
Ando, S., and T. Yokoyama. 1999. Phylogenetic analyses of Bradyrhizobium strains nodulating soybean (Glycine max) in Thailand with reference to the USDA strains of Bradyrhizobium. Can. J. Microbiol. 45:639-645.
-
(1999)
Can. J. Microbiol
, vol.45
, pp. 639-645
-
-
Ando, S.1
Yokoyama, T.2
-
2
-
-
33745256005
-
Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative
-
Anisimova, M., and O. Gascuel. 2006. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst. Biol. 55:539-552.
-
(2006)
Syst. Biol
, vol.55
, pp. 539-552
-
-
Anisimova, M.1
Gascuel, O.2
-
3
-
-
54449096586
-
Genetic diversity of native bradyrhizobia isolated from soybean (Glycine max L.) in different agro-ecoclimatic regions of India
-
Appunu, C., A. N'Zoue, and G. Laguerre. 2008. Genetic diversity of native bradyrhizobia isolated from soybean (Glycine max L.) in different agro-ecoclimatic regions of India. Appl. Environ. Microbiol.74:5991- 5996.
-
(2008)
Appl. Environ. Microbiol
, vol.74
, pp. 5991-5996
-
-
Appunu, C.1
N'Zoue, A.2
Laguerre, G.3
-
4
-
-
84886301486
-
-
D. Werner ed, Biological resources and migration. Springer Verlag, Heidelberg, Germany
-
Carter, T. E., T. Hymowitz, and R. L. Nelson. 2004. Biogeography, local adaptation, vavilov, and genetic diversity in soybean, p. 47-59. In D. Werner (ed.), Biological resources and migration. Springer Verlag, Heidelberg, Germany.
-
(2004)
Biogeography, local adaptation, vavilov, and genetic diversity in soybean
, pp. 47-59
-
-
Carter, T.E.1
Hymowitz, T.2
Nelson, R.L.3
-
5
-
-
33646928341
-
Discordance of species trees with their most likely gene trees
-
Degnan, J. H., and N. A. Rosenberg. 2006. Discordance of species trees with their most likely gene trees. PLoS Genet. 2:e68.
-
(2006)
PLoS Genet
, vol.2
-
-
Degnan, J.H.1
Rosenberg, N.A.2
-
6
-
-
13244255415
-
MUSCLE: A multiple sequence alignment method with reduced time and space complexity
-
Edgar, R. C. 2004. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5:113.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 113
-
-
Edgar, R.C.1
-
8
-
-
0030821992
-
Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
-
Fu, Y.-X. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915-925.
-
(1997)
Genetics
, vol.147
, pp. 915-925
-
-
Fu, Y.-X.1
-
9
-
-
0027453041
-
Statistical tests of neutrality of mutations
-
Fu, Y.-X., and W.-H. Li. 1993. Statistical tests of neutrality of mutations. Genetics 133:693-709.
-
(1993)
Genetics
, vol.133
, pp. 693-709
-
-
Fu, Y.-X.1
Li, W.-H.2
-
10
-
-
23944437942
-
Re-evaluating prokaryotic species
-
Gevers, D., F. M. Cohan, J. G. Lawrence, B. G. Spratt, T. Coenye, E. J. Feil, E. Stackebrandt, Y. Van de Peer, P. Vandamme, F. L. Thompson, and J. Swings. 2005. Re-evaluating prokaryotic species. Nat. Rev. Microbiol. 3:733-739.
-
(2005)
Nat. Rev. Microbiol
, vol.3
, pp. 733-739
-
-
Gevers, D.1
Cohan, F.M.2
Lawrence, J.G.3
Spratt, B.G.4
Coenye, T.5
Feil, E.J.6
Stackebrandt, E.7
Van de Peer, Y.8
Vandamme, P.9
Thompson, F.L.10
Swings, J.11
-
11
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon, S., and O. Gascuel. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 52:696-704.
-
(2003)
Syst. Biol
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
12
-
-
0019491699
-
-
Hollis, A. B., W. E. Kloos, and G. E. Elkan. 1981. DNA:DNA hybridization studies of Rhizobium japonicum and related Rhizobiaceae. J. Gen. Microbiol. 123:215-222.
-
Hollis, A. B., W. E. Kloos, and G. E. Elkan. 1981. DNA:DNA hybridization studies of Rhizobium japonicum and related Rhizobiaceae. J. Gen. Microbiol. 123:215-222.
-
-
-
-
13
-
-
0023612034
-
Estimating the recombination parameter of a finite population model without selection
-
Hudson, R. R. 1987. Estimating the recombination parameter of a finite population model without selection. Genet. Res. 50:245-250.
-
(1987)
Genet. Res
, vol.50
, pp. 245-250
-
-
Hudson, R.R.1
-
14
-
-
0001935493
-
Gene genealogies and the coalescent process
-
Hudson, R. R. 1990. Gene genealogies and the coalescent process. Oxf. Surv. Evol. Biol. 7:1-44.
-
(1990)
Oxf. Surv. Evol. Biol
, vol.7
, pp. 1-44
-
-
Hudson, R.R.1
-
15
-
-
0026512283
-
A statistical test for detecting geographic subdivision
-
Hudson, R. R., D. D. Boos, and N. L. Kaplan. 1992. A statistical test for detecting geographic subdivision. Mol. Biol. Evol. 9:138-151.
-
(1992)
Mol. Biol. Evol
, vol.9
, pp. 138-151
-
-
Hudson, R.R.1
Boos, D.D.2
Kaplan, N.L.3
-
16
-
-
0022211482
-
Statistical properties of the number of recombination events in the history of a sample of DNA sequences
-
Hudson, R. R., and N. L. Kaplan. 1985. Statistical properties of the number of recombination events in the history of a sample of DNA sequences. Genetics 111:147-164.
-
(1985)
Genetics
, vol.111
, pp. 147-164
-
-
Hudson, R.R.1
Kaplan, N.L.2
-
17
-
-
0026709389
-
Estimation of levels of gene flow from DNA sequence data
-
Hudson, R. R., M. Slatkin, and W. P. Maddison. 1992. Estimation of levels of gene flow from DNA sequence data. Genetics 132:583-589.
-
(1992)
Genetics
, vol.132
, pp. 583-589
-
-
Hudson, R.R.1
Slatkin, M.2
Maddison, W.P.3
-
18
-
-
10744231638
-
Genetic diversity of bradyrhizobial populations from diverse geographic origins that nodulate Lupinus spp. and Ornithopus spp
-
Jarabo-Lorenzo, A., R. Pérez-Galdona, J. Donate-Correa, R. Rivas, E. Velázquez, M. Hernández, F. Temprano, E. Martínez-Molina, T. Ruiz-Argüeso, and M. León-Barrios. 2003. Genetic diversity of bradyrhizobial populations from diverse geographic origins that nodulate Lupinus spp. and Ornithopus spp. Syst. Appl. Microbiol. 26:611-623.
-
(2003)
Syst. Appl. Microbiol
, vol.26
, pp. 611-623
-
-
Jarabo-Lorenzo, A.1
Pérez-Galdona, R.2
Donate-Correa, J.3
Rivas, R.4
Velázquez, E.5
Hernández, M.6
Temprano, F.7
Martínez-Molina, E.8
Ruiz-Argüeso, T.9
León-Barrios, M.10
-
19
-
-
0020070801
-
Transfer of Rhizobium japonicum Buchanan 1980 to Bradyrhizobium gen. nov., a genus of slow-growing root nodule bacteria from leguminous plants
-
Jordan, D. C. 1982. Transfer of Rhizobium japonicum Buchanan 1980 to Bradyrhizobium gen. nov., a genus of slow-growing root nodule bacteria from leguminous plants. Int. J. Syst. Bacteriol. 32:136-139.
-
(1982)
Int. J. Syst. Bacteriol
, vol.32
, pp. 136-139
-
-
Jordan, D.C.1
-
20
-
-
0242405650
-
Usefulness of rpoB gene sequencing for identification of Afipia and Bosea species, including a strategy for choosing discriminative partial sequences
-
Khamis, A., P. Colson, D. Raoult, and B. L. Scola. 2003. Usefulness of rpoB gene sequencing for identification of Afipia and Bosea species, including a strategy for choosing discriminative partial sequences. Appl. Environ. Microbiol. 69:6740-6749.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 6740-6749
-
-
Khamis, A.1
Colson, P.2
Raoult, D.3
Scola, B.L.4
-
22
-
-
33847302458
-
Inconsistency of phylogenetic estimates from concatenated data under coalescence
-
Kubatko, L. S., and J. H. Degnan. 2007. Inconsistency of phylogenetic estimates from concatenated data under coalescence. Syst. Biol. 56:17-24.
-
(2007)
Syst. Biol
, vol.56
, pp. 17-24
-
-
Kubatko, L.S.1
Degnan, J.H.2
-
23
-
-
0026667451
-
Genetic diversity in Bradyrhizobium japonicum Jordan 1982 and a proposal for Bradyrhizobium elkanii sp. nov
-
Kuykendall, L. D., B. Saxena, T. E. Devine, and S. E. Udell. 1992. Genetic diversity in Bradyrhizobium japonicum Jordan 1982 and a proposal for Bradyrhizobium elkanii sp. nov. Can. J. Microbiol. 38:501-505.
-
(1992)
Can. J. Microbiol
, vol.38
, pp. 501-505
-
-
Kuykendall, L.D.1
Saxena, B.2
Devine, T.E.3
Udell, S.E.4
-
24
-
-
38549123654
-
Molecular diversity of legume root-nodule bacteria in Kakadu National Park, Northern Territory, Australia
-
Lafay, B., and J. J. Burdon. 2007. Molecular diversity of legume root-nodule bacteria in Kakadu National Park, Northern Territory, Australia. PLoS ONE. 2:e277.
-
(2007)
PLoS ONE
, vol.2
-
-
Lafay, B.1
Burdon, J.J.2
-
25
-
-
33644606488
-
Inferring phylogeny despite incomplete lineage sorting
-
Maddison, W. P., and L. L. Knowles. 2006. Inferring phylogeny despite incomplete lineage sorting. Syst. Biol. 55:21-30.
-
(2006)
Syst. Biol
, vol.55
, pp. 21-30
-
-
Maddison, W.P.1
Knowles, L.L.2
-
26
-
-
45849098057
-
Production, regional distribution of cultivars, and agricultural aspects of soybean in India
-
D. Werner and W. E. Newton ed, Springer Verlag, Dordrecht, The Netherlands
-
Mahna, S. K. 2005. Production, regional distribution of cultivars, and agricultural aspects of soybean in India, p. 43-66. In D. Werner and W. E. Newton (ed.), Nitrogen fixation in agriculture, forestry and the environment. Springer Verlag, Dordrecht, The Netherlands.
-
(2005)
Nitrogen fixation in agriculture, forestry and the environment
, pp. 43-66
-
-
Mahna, S.K.1
-
27
-
-
31544448331
-
Microbial biogeography: Putting microorganisms on the map
-
Martiny, J. B., B. J. Bohannan, J. H. Brown, R. K. Colwell, J. A. Fuhrman, J. L. Green, M. C. Horner-Devine, M. Kane, J. A. Krumins, C. R. Kuske, P. J. Morin, S. Naeem, L. Ovreas, A. L. Reysenbach, V. H. Smith, and J. T. Staley. 2006. Microbial biogeography: putting microorganisms on the map. Nat. Rev. Microbiol. 4:102-112.
-
(2006)
Nat. Rev. Microbiol
, vol.4
, pp. 102-112
-
-
Martiny, J.B.1
Bohannan, B.J.2
Brown, J.H.3
Colwell, R.K.4
Fuhrman, J.A.5
Green, J.L.6
Horner-Devine, M.C.7
Kane, M.8
Krumins, J.A.9
Kuske, C.R.10
Morin, P.J.11
Naeem, S.12
Ovreas, L.13
Reysenbach, A.L.14
Smith, V.H.15
Staley, J.T.16
-
28
-
-
0027287389
-
How clonal are bacteria?
-
Maynard-Smith, J., N. H. Smith, M. O'Rourke, and B. G. Spratt. 1993. How clonal are bacteria? Proc. Natl. Acad. Sci. USA 90:4384-4388.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 4384-4388
-
-
Maynard-Smith, J.1
Smith, N.H.2
O'Rourke, M.3
Spratt, B.G.4
-
29
-
-
0032126875
-
Biodiversity of rhizobia isolated from a wide range of forest legumes in Brazil
-
Moreira, F. M., K. Haukka, and J. P. Young. 1998. Biodiversity of rhizobia isolated from a wide range of forest legumes in Brazil. Mol. Ecol. 7:889-895.
-
(1998)
Mol. Ecol
, vol.7
, pp. 889-895
-
-
Moreira, F.M.1
Haukka, K.2
Young, J.P.3
-
30
-
-
0035400648
-
Gene trees and species trees are not the same
-
Nichols, R. 2001. Gene trees and species trees are not the same. Trends Ecol. Evol. 16:358-364.
-
(2001)
Trends Ecol. Evol
, vol.16
, pp. 358-364
-
-
Nichols, R.1
-
31
-
-
33645238724
-
Molecular diversity of native bradyrhizobia isolated from lima bean (Phaseolus lunatus L.) in Peru
-
Ormeño-Orrillo, E., P. Vinuesa, D. Zúñiga- Dávila, and E. Martínez-Romero. 2006. Molecular diversity of native bradyrhizobia isolated from lima bean (Phaseolus lunatus L.) in Peru. Syst. Appl. Microbiol. 29:253-262.
-
(2006)
Syst. Appl. Microbiol
, vol.29
, pp. 253-262
-
-
Ormeño-Orrillo, E.1
Vinuesa, P.2
Zúñiga- Dávila, D.3
Martínez-Romero, E.4
-
32
-
-
0036211217
-
Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern
-
Parker, M. A. 2002. Bradyrhizobia from wild Phaseolus, Desmodium, and Macroptilium species in northern Mexico. Appl. Environ. Microbiol. 68:2044-2048.
-
(2002)
Mexico. Appl. Environ. Microbiol
, vol.68
, pp. 2044-2048
-
-
Parker, M.A.1
-
33
-
-
0035344698
-
Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with neotropical legumes
-
Parker, M. A. 2001. Case of localized recombination in 23S rRNA genes from divergent Bradyrhizobium lineages associated with neotropical legumes. Appl. Environ. Microbiol. 67:2076-2082.
-
(2001)
Appl. Environ. Microbiol
, vol.67
, pp. 2076-2082
-
-
Parker, M.A.1
-
34
-
-
2642587193
-
rRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four papilionoid legume trees in Costa Rica
-
Parker, M. A. 2004. rRNA and dnaK relationships of Bradyrhizobium sp. nodule bacteria from four papilionoid legume trees in Costa Rica. Syst. Appl. Microbiol. 27:334-342.
-
(2004)
Syst. Appl. Microbiol
, vol.27
, pp. 334-342
-
-
Parker, M.A.1
-
35
-
-
42649119777
-
Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: A review
-
Parker, M. A. 2008. Symbiotic relationships of legumes and nodule bacteria on Barro Colorado Island, Panama: a review. Microb. Ecol. 55:662-672.
-
(2008)
Microb. Ecol
, vol.55
, pp. 662-672
-
-
Parker, M.A.1
-
36
-
-
0036201275
-
Identification of isolates from soybean nodules in Xinjiang Region as Sinorhizobium xinjiangense and genetic differentiation of S. xinjiangense from Sinorhizobium fredii
-
Peng, G. X., Z. Y. Tan, E. T. Wang, B. Reinhold-Hurek, W. F. Chen, and W. X. Chen. 2002. Identification of isolates from soybean nodules in Xinjiang Region as Sinorhizobium xinjiangense and genetic differentiation of S. xinjiangense from Sinorhizobium fredii. Int. J. Syst. Evol. Microbiol. 52:457-462.
-
(2002)
Int. J. Syst. Evol. Microbiol
, vol.52
, pp. 457-462
-
-
Peng, G.X.1
Tan, Z.Y.2
Wang, E.T.3
Reinhold-Hurek, B.4
Chen, W.F.5
Chen, W.X.6
-
37
-
-
9644301241
-
Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
-
Posada, D., and T. R. Buckley. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Syst. Biol. 53:793-808.
-
(2004)
Syst. Biol
, vol.53
, pp. 793-808
-
-
Posada, D.1
Buckley, T.R.2
-
38
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
Posada, D., and K. A. Crandall. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
39
-
-
0035527410
-
Selecting the best-fit model of nucleotide substitution
-
Posada, D., and K. A. Crandall. 2001. Selecting the best-fit model of nucleotide substitution. Syst. Biol. 50:580-601.
-
(2001)
Syst. Biol
, vol.50
, pp. 580-601
-
-
Posada, D.1
Crandall, K.A.2
-
40
-
-
33847327474
-
Biogeography: An emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution
-
Ramette, A., and J. M. Tiedje. 2007. Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution. Microb. Ecol. 53:197-207.
-
(2007)
Microb. Ecol
, vol.53
, pp. 197-207
-
-
Ramette, A.1
Tiedje, J.M.2
-
41
-
-
0036897674
-
Statistical properties of new neutrality tests against population growth
-
Ramos-Onsins, S. E., and J. Rozas. 2002. Statistical properties of new neutrality tests against population growth. Mol. Biol. Evol. 19:2092-2100.
-
(2002)
Mol. Biol. Evol
, vol.19
, pp. 2092-2100
-
-
Ramos-Onsins, S.E.1
Rozas, J.2
-
42
-
-
4344610626
-
Bradryrhizobium betae sp. nov. isolated from roots of Beta vulgaris affected by tumor-like deformations
-
Rivas, R., A. Willems, J. L. Palomo, P. García-Benavides, P. F. Mateos, E. Martinez-Molina, M. Gillis, and E. Velázquez. 2004. Bradryrhizobium betae sp. nov. isolated from roots of Beta vulgaris affected by tumor-like deformations. Int. J. Syst. Evol. Microbiol. 54:1271-1275.
-
(2004)
Int. J. Syst. Evol. Microbiol
, vol.54
, pp. 1271-1275
-
-
Rivas, R.1
Willems, A.2
Palomo, J.L.3
García-Benavides, P.4
Mateos, P.F.5
Martinez-Molina, E.6
Gillis, M.7
Velázquez, E.8
-
43
-
-
0036515730
-
The probability of topological concordance of gene trees and species trees
-
Rosenberg, N. A. 2002. The probability of topological concordance of gene trees and species trees. Theor. Pop. Biol. 61:225-247.
-
(2002)
Theor. Pop. Biol
, vol.61
, pp. 225-247
-
-
Rosenberg, N.A.1
-
44
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas, J., J. C. Sánchez-DelBarrio, X. Messeguer, and R. Rozas. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sánchez-DelBarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
45
-
-
33846474475
-
Soybean cultivation and BNF in China
-
D. Werner and W. E. Newton ed, Springer Verlag, Dordrecht, The Netherlands
-
Ruiz Sainz, J. E., J. C. Zhou, D.-N. Rodriguez-Navarro, J. M. Vinardell, and J. E. Thomas-Oates. 2005. Soybean cultivation and BNF in China, p. 67-87. In D. Werner and W. E. Newton (ed.), Nitrogen fixation in agriculture, forestry and the environment. Springer Verlag, Dordrecht, The Netherlands.
-
(2005)
Nitrogen fixation in agriculture, forestry and the environment
, pp. 67-87
-
-
Ruiz Sainz, J.E.1
Zhou, J.C.2
Rodriguez-Navarro, D.-N.3
Vinardell, J.M.4
Thomas-Oates, J.E.5
-
46
-
-
0000932722
-
Rhizobium fredii sp. nov., a fast-growing species that effectively nodulates soybeans
-
Scholla, M. H., and G. H. Elkan. 1984. Rhizobium fredii sp. nov., a fast-growing species that effectively nodulates soybeans. Int. J. Syst. Bacteriol. 34:484-486.
-
(1984)
Int. J. Syst. Bacteriol
, vol.34
, pp. 484-486
-
-
Scholla, M.H.1
Elkan, G.H.2
-
47
-
-
0032766857
-
Multiple comparisons of loglikelihoods with applications to phylogenetic inference
-
Shimodaira, H., and M. Hasegawa. 1999. Multiple comparisons of loglikelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 16:1114-1116.
-
(1999)
Mol. Biol. Evol
, vol.16
, pp. 1114-1116
-
-
Shimodaira, H.1
Hasegawa, M.2
-
48
-
-
0033047060
-
Reticulated and epidemic population genetic structure of Rhizobium etli biovar phaseoli in a traditionally managed locality in Mexico
-
Silva, C., L. E. Eguiarte, and V. Souza. 1999. Reticulated and epidemic population genetic structure of Rhizobium etli biovar phaseoli in a traditionally managed locality in Mexico. Mol. Ecol. 8:277-287.
-
(1999)
Mol. Ecol
, vol.8
, pp. 277-287
-
-
Silva, C.1
Eguiarte, L.E.2
Souza, V.3
-
49
-
-
0037317558
-
Rhizobium etli and Rhizobium gallicum nodulate common bean (Phaseolus vulgaris) in a traditionally managed milpa plot in Mexico: Population genetics and biogeographic implications
-
Silva, C., P. Vinuesa, L. E. Eguiarte, E. Martínez-Romero, and V. Souza. 2003. Rhizobium etli and Rhizobium gallicum nodulate common bean (Phaseolus vulgaris) in a traditionally managed milpa plot in Mexico: population genetics and biogeographic implications. Appl. Environ. Microbiol. 69:884-893.
-
(2003)
Appl. Environ. Microbiol
, vol.69
, pp. 884-893
-
-
Silva, C.1
Vinuesa, P.2
Eguiarte, L.E.3
Martínez-Romero, E.4
Souza, V.5
-
50
-
-
33646167708
-
Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes
-
Silva, C., P. Vinuesa, L. E. Eguiarte, V. Souza, and E. Martínez-Romero. 2005. Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes. Mol. Ecol. 14:4033-4050.
-
(2005)
Mol. Ecol
, vol.14
, pp. 4033-4050
-
-
Silva, C.1
Vinuesa, P.2
Eguiarte, L.E.3
Souza, V.4
Martínez-Romero, E.5
-
51
-
-
0028264395
-
Photosynthetic symbionts of Aeschynomene spp. form a cluster with bradyrhizobia on the basis of fatty acid and rRNA analyses
-
So, R. B., J. K. Ladha, and J. P. Young. 1994. Photosynthetic symbionts of Aeschynomene spp. form a cluster with bradyrhizobia on the basis of fatty acid and rRNA analyses. Int. J. Syst. Bacteriol. 44:392-403.
-
(1994)
Int. J. Syst. Bacteriol
, vol.44
, pp. 392-403
-
-
So, R.B.1
Ladha, J.K.2
Young, J.P.3
-
52
-
-
50549098293
-
Cowpea and peanut in southern Africa are nodulated by diverse Bradyrhizobium strains harboring nodulation genes that belong to the large pantropical clade common in Africa
-
Steenkamp, E. T., T. Stepkowski, A. Przymusiak, W. J. Botha, and I. J. Law. 2008. Cowpea and peanut in southern Africa are nodulated by diverse Bradyrhizobium strains harboring nodulation genes that belong to the large pantropical clade common in Africa. Mol. Phylogenet. Evol. 48:1131-1144.
-
(2008)
Mol. Phylogenet. Evol
, vol.48
, pp. 1131-1144
-
-
Steenkamp, E.T.1
Stepkowski, T.2
Przymusiak, A.3
Botha, W.J.4
Law, I.J.5
-
53
-
-
34249728324
-
Diversification of lupine Bradyrhizobium strains: Evidence from nodulation gene trees
-
Stepkowski, T., C. E. Hughes, I. J. Law, L. Markiewicz, D. Gurda, A. Chlebicka, and L. Moulin. 2007. Diversification of lupine Bradyrhizobium strains: evidence from nodulation gene trees. Appl. Environ. Microbiol. 73:3254-3264.
-
(2007)
Appl. Environ. Microbiol
, vol.73
, pp. 3254-3264
-
-
Stepkowski, T.1
Hughes, C.E.2
Law, I.J.3
Markiewicz, L.4
Gurda, D.5
Chlebicka, A.6
Moulin, L.7
-
54
-
-
32044456213
-
European origin of Bradyrhizobium populations infecting lupins and serradella in soils of Western Australia and South Africa
-
Stepkowski, T., L. Moulin, A. Krzyzanska, A. McInnes, I. J. Law, and J. Howieson. 2005. European origin of Bradyrhizobium populations infecting lupins and serradella in soils of Western Australia and South Africa. Appl. Environ. Microbiol. 71:7041-7052.
-
(2005)
Appl. Environ. Microbiol
, vol.71
, pp. 7041-7052
-
-
Stepkowski, T.1
Moulin, L.2
Krzyzanska, A.3
McInnes, A.4
Law, I.J.5
Howieson, J.6
-
56
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima, F. 1989. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
57
-
-
0030876644
-
Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related rhizobia
-
Tan, Z. Y., X. D. Xu, E. T. Wang, J. L. Gao, E. Martinez-Romero, and W. X. Chen. 1997. Phylogenetic and genetic relationships of Mesorhizobium tianshanense and related rhizobia. Int. J. Syst. Bacteriol. 47:874-879.
-
(1997)
Int. J. Syst. Bacteriol
, vol.47
, pp. 874-879
-
-
Tan, Z.Y.1
Xu, X.D.2
Wang, E.T.3
Gao, J.L.4
Martinez-Romero, E.5
Chen, W.X.6
-
58
-
-
0034525526
-
Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence
-
van Berkum, P., and J. J. Fuhrmann. 2000. Evolutionary relationships among the soybean bradyrhizobia reconstructed from 16S rRNA gene and internally transcribed spacer region sequence divergence. Int. J. Syst. Evol. Microbiol. 50:2165-2172.
-
(2000)
Int. J. Syst. Evol. Microbiol
, vol.50
, pp. 2165-2172
-
-
van Berkum, P.1
Fuhrmann, J.J.2
-
59
-
-
0038222576
-
Discordant phylogenies within the rrn loci of rhizobia
-
van Berkum, P., Z. Terefework, L. Paulin, S. Suomalainen, K. Lindström, and B. D. Eardly. 2003. Discordant phylogenies within the rrn loci of rhizobia. J. Bacteriol. 185:2988-2998.
-
(2003)
J. Bacteriol
, vol.185
, pp. 2988-2998
-
-
van Berkum, P.1
Terefework, Z.2
Paulin, L.3
Suomalainen, S.4
Lindström, K.5
Eardly, B.D.6
-
60
-
-
0028933008
-
Genetic and phenetic analyses of Bradyrhizobium strains nodulating peanut (Arachis hypogaea L.) roots
-
van Rossum, D., F. P. Schuurmans, M. Gillis, A. Muyotcha, H. W. Van Verseveld, A. H. Stouthamer, and F. C. Boogerd. 1995. Genetic and phenetic analyses of Bradyrhizobium strains nodulating peanut (Arachis hypogaea L.) roots. Appl. Environ. Microbiol. 61:1599-1609.
-
(1995)
Appl. Environ. Microbiol
, vol.61
, pp. 1599-1609
-
-
van Rossum, D.1
Schuurmans, F.P.2
Gillis, M.3
Muyotcha, A.4
Van Verseveld, H.W.5
Stouthamer, A.H.6
Boogerd, F.C.7
-
61
-
-
16844373395
-
-
Vinuesa, P., M. León-Barrios, C. Silva, A. Willems, A. Jarabo-Lorenzo, R. Pérez-Galdona, D. Werner, and E. Martínez- Romero. 2005. Bradyrhizobium canariense sp. nov., an acid-tolerant endosymbiont that nodulates endemic genistoid legumes (Papilionoideae:Genisteae) growing in the Canary Islands, along with B. japonicum bv. genistearum, Bradyrhizobium genospecies α and Bradyrhizobium genospecies β. Int. J. Syst. Evol. Microbiol. 55:569-575.
-
Vinuesa, P., M. León-Barrios, C. Silva, A. Willems, A. Jarabo-Lorenzo, R. Pérez-Galdona, D. Werner, and E. Martínez- Romero. 2005. Bradyrhizobium canariense sp. nov., an acid-tolerant endosymbiont that nodulates endemic genistoid legumes (Papilionoideae:Genisteae) growing in the Canary Islands, along with B. japonicum bv. genistearum, Bradyrhizobium genospecies α and Bradyrhizobium genospecies β. Int. J. Syst. Evol. Microbiol. 55:569-575.
-
-
-
-
62
-
-
0031746448
-
Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary Islands by PCR-restriction fragment length polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindromic PCR genomic fingerprinting, and partial 16S rDNA sequencing
-
Vinuesa, P., J. L. W. Rademaker, F. J. de Bruijn, and D. Werner. 1998. Genotypic characterization of Bradyrhizobium strains nodulating endemic woody legumes of the Canary Islands by PCR-restriction fragment length polymorphism analysis of genes encoding 16S rRNA (16S rDNA) and 16S-23S rDNA intergenic spacers, repetitive extragenic palindromic PCR genomic fingerprinting, and partial 16S rDNA sequencing. Appl. Environ. Microbiol. 64:2096-2104.
-
(1998)
Appl. Environ. Microbiol
, vol.64
, pp. 2096-2104
-
-
Vinuesa, P.1
Rademaker, J.L.W.2
de Bruijn, F.J.3
Werner, D.4
-
63
-
-
9944241194
-
-
D. Werner ed, Biological resources and migration. Springer Verlag, Berlin, Germany
-
Vinuesa, P., and C. Silva. 2004. Species delineation and biogeography of symbiotic bacteria associated with cultivated and wild legumes, p. 143-161. In D. Werner (ed.), Biological resources and migration. Springer Verlag, Berlin, Germany.
-
(2004)
Species delineation and biogeography of symbiotic bacteria associated with cultivated and wild legumes
, pp. 143-161
-
-
Vinuesa, P.1
Silva, C.2
-
64
-
-
25144442706
-
Molecular systematics of rhizobia based on maximum likelihood and Bayesian phylogenies inferred from rrs, atpD, recA and nifH sequences, and their use in the classification of Sesbania microsymbionts from Venezuelan wetlands
-
Vinuesa, P., C. Silva, M. J. Lorite, M. L. Izaguirre-Mayoral, E. J. Bedmar, and E. Martínez-Romero. 2005. Molecular systematics of rhizobia based on maximum likelihood and Bayesian phylogenies inferred from rrs, atpD, recA and nifH sequences, and their use in the classification of Sesbania microsymbionts from Venezuelan wetlands. Syst. Appl. Microbiol. 28:702-716.
-
(2005)
Syst. Appl. Microbiol
, vol.28
, pp. 702-716
-
-
Vinuesa, P.1
Silva, C.2
Lorite, M.J.3
Izaguirre-Mayoral, M.L.4
Bedmar, E.J.5
Martínez-Romero, E.6
-
65
-
-
9944222667
-
Population genetics and phylogenetic inference in bacterial molecular systematics: The roles of migration and recombination in Bradyrhizobium species cohesion and delineation
-
Vinuesa, P., C. Silva, D. Werner, and E. Martínez-Romero. 2005. Population genetics and phylogenetic inference in bacterial molecular systematics: the roles of migration and recombination in Bradyrhizobium species cohesion and delineation. Mol. Phylogenet. Evol. 34:29-54.
-
(2005)
Mol. Phylogenet. Evol
, vol.34
, pp. 29-54
-
-
Vinuesa, P.1
Silva, C.2
Werner, D.3
Martínez-Romero, E.4
-
66
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Waterson, G. A. 1975. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7:256-276.
-
(1975)
Theor. Popul. Biol
, vol.7
, pp. 256-276
-
-
Waterson, G.A.1
-
67
-
-
33846474475
-
-
Werner, D, and W. E. Newton ed, Springer Verlag, Dordrecht, The Netherlands
-
Werner, D., and W. E. Newton (ed.). 2005. Nitrogen fixation in agriculture, forestry and the environment. Springer Verlag, Dordrecht, The Netherlands.
-
(2005)
Nitrogen fixation in agriculture, forestry and the environment
-
-
-
68
-
-
0035151510
-
Phylogenetic and DNA-DNA hybridization analyses of Bradyrhizobium species
-
Willems, A., R. Coopman, and M. Gillis. 2001. Phylogenetic and DNA-DNA hybridization analyses of Bradyrhizobium species. Int. J. Syst. Evol. Microbiol. 51:111-117.
-
(2001)
Int. J. Syst. Evol. Microbiol
, vol.51
, pp. 111-117
-
-
Willems, A.1
Coopman, R.2
Gillis, M.3
-
69
-
-
0028784710
-
Bradyrhizobium liaoningense sp. nov., isolated from the root nodules of soybeans
-
Xu, L. M., C. Ge, Z. Cui, J. Li, and H. Fan. 1995. Bradyrhizobium liaoningense sp. nov., isolated from the root nodules of soybeans. Int. J. Syst. Bacteriol. 45:706-711.
-
(1995)
Int. J. Syst. Bacteriol
, vol.45
, pp. 706-711
-
-
Xu, L.M.1
Ge, C.2
Cui, Z.3
Li, J.4
Fan, H.5
-
70
-
-
0036865629
-
Characterization of rhizobia that nodulate legume species of the genus Lespedeza and description of Bradyrhizobium yuanmingense sp. nov
-
Yao, Z. Y., F. L. Kan, E. T. Wang, G. H. Wei, and W. X. Chen. 2002. Characterization of rhizobia that nodulate legume species of the genus Lespedeza and description of Bradyrhizobium yuanmingense sp. nov. Int. J. Syst. Evol. Microbiol. 52:2219-2230.
-
(2002)
Int. J. Syst. Evol. Microbiol
, vol.52
, pp. 2219-2230
-
-
Yao, Z.Y.1
Kan, F.L.2
Wang, E.T.3
Wei, G.H.4
Chen, W.X.5
-
71
-
-
33645793252
-
Variation in the nod gene RFLPs, nucleotide sequences of 16S rRNA genes, Nod factors, and nodulation abilities of Bradyrhizobium strains isolated from Thai Vigna plants
-
Yokoyama, T., N. Tomooka, M. Okabayashi, A. Kaga, N. Boonkerd, and D. A. Vaughan. 2006. Variation in the nod gene RFLPs, nucleotide sequences of 16S rRNA genes, Nod factors, and nodulation abilities of Bradyrhizobium strains isolated from Thai Vigna plants. Can. J. Microbiol. 52:31-46.
-
(2006)
Can. J. Microbiol
, vol.52
, pp. 31-46
-
-
Yokoyama, T.1
Tomooka, N.2
Okabayashi, M.3
Kaga, A.4
Boonkerd, N.5
Vaughan, D.A.6
-
72
-
-
0032823302
-
Phylogeny and diversity of Bradyrhizobium strains isolated from the root nodules of peanut (Arachis hypogaea) in Sichuan, China
-
Zhang, X., G. Nick, S. Kaijalainen, Z. Terefework, L. Paulin, S. W. Tighe, P. H. Graham, and K. Lindström. 1999. Phylogeny and diversity of Bradyrhizobium strains isolated from the root nodules of peanut (Arachis hypogaea) in Sichuan, China. Syst. Appl. Microbiol. 22:378-386.
-
(1999)
Syst. Appl. Microbiol
, vol.22
, pp. 378-386
-
-
Zhang, X.1
Nick, G.2
Kaijalainen, S.3
Terefework, Z.4
Paulin, L.5
Tighe, S.W.6
Graham, P.H.7
Lindström, K.8
-
73
-
-
47349093878
-
Bradyrhizobium elkanii, Bradyrhizobium yuanmingense and Bradyrhizobium japonicum are the main rhizobia associated with Vigna unguiculata and Vigna radiata in the subtropical region of China
-
Zhang, Y. F., E. T. Wang, C. F. Tian, F. Q. Wang, L. L. Han, W. F. Chen, and W. X. Chen. 2008. Bradyrhizobium elkanii, Bradyrhizobium yuanmingense and Bradyrhizobium japonicum are the main rhizobia associated with Vigna unguiculata and Vigna radiata in the subtropical region of China. FEMS Microbiol. Lett. 285:146-154.
-
(2008)
FEMS Microbiol. Lett
, vol.285
, pp. 146-154
-
-
Zhang, Y.F.1
Wang, E.T.2
Tian, C.F.3
Wang, F.Q.4
Han, L.L.5
Chen, W.F.6
Chen, W.X.7
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